Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH52276 | Soybean | cytosol | 24.61 | 81.91 |
| GSMUA_Achr10P... | Banana | nucleus | 21.62 | 54.6 |
| Solyc08g067210.2.1 | Tomato | nucleus | 45.52 | 53.29 |
| GSMUA_Achr10P... | Banana | cytosol | 12.6 | 49.88 |
| Os01t0909200-01 | Rice | cytosol | 49.1 | 49.79 |
| AT3G43920.2 | Thale cress | cytosol, nucleus, plastid | 46.48 | 49.24 |
| CDY30942 | Canola | nucleus | 37.04 | 49.17 |
| TraesCS1B01G177600.1 | Wheat | nucleus | 29.81 | 48.17 |
| KXG33962 | Sorghum | nucleus | 47.67 | 48.16 |
| Bra019456.1-P | Field mustard | nucleus | 41.52 | 48.03 |
| Zm00001d042432_P007 | Maize | cytosol | 47.37 | 47.54 |
| CDY21223 | Canola | nucleus | 43.13 | 47.16 |
| TraesCS1A01G160900.1 | Wheat | nucleus | 45.4 | 46.71 |
| Zm00001d032655_P006 | Maize | nucleus | 43.49 | 46.37 |
| TraesCS1D01G158000.2 | Wheat | nucleus | 44.98 | 46.25 |
| TraesCS3A01G415400.2 | Wheat | nucleus | 46.36 | 46.25 |
| VIT_04s0008g02170.t01 | Wine grape | mitochondrion | 53.64 | 46.22 |
| TraesCS3B01G450600.3 | Wheat | nucleus | 46.18 | 46.09 |
| TraesCS3D01G411200.6 | Wheat | nucleus | 44.98 | 46.08 |
| Os10t0485600-01 | Rice | cytosol, plastid | 44.98 | 46.0 |
| GSMUA_Achr5P10880_001 | Banana | cytosol | 43.91 | 45.99 |
| OQU91611 | Sorghum | nucleus, plastid | 44.8 | 45.82 |
| HORVU3Hr1G092430.9 | Barley | cytosol, nucleus, plastid | 45.46 | 45.16 |
| HORVU1Hr1G042710.5 | Barley | cytosol, mitochondrion, nucleus | 45.16 | 44.92 |
| KRH11802 | Soybean | cytosol | 6.27 | 36.84 |
| KRH14361 | Soybean | cytosol | 6.51 | 31.59 |
| KRH36818 | Soybean | cytosol, nucleus, plastid | 25.45 | 30.13 |
| KRH20103 | Soybean | nucleus | 29.21 | 29.87 |
| KRH36816 | Soybean | cytosol | 25.33 | 29.84 |
| KRH03544 | Soybean | nucleus | 29.15 | 29.83 |
| KRH68982 | Soybean | cytosol, nucleus, plastid | 31.3 | 26.91 |
| KRG97266 | Soybean | cytosol, nucleus, plastid | 31.24 | 26.89 |
| KRG97157 | Soybean | cytosol, nucleus, plasma membrane | 12.13 | 25.76 |
Protein Annotations
| Gene3D:1.10.1520.10 | EntrezGene:100806831 | MapMan:12.5.1.8 | Gene3D:2.170.260.10 | Gene3D:3.30.160.20 | Gene3D:3.30.160.380 |
| Gene3D:3.40.50.300 | EMBL:ACUP02002174 | ncoils:Coil | InterPro:Dicer_dimer_sf | InterPro:Dicer_dimerisation_dom | EnsemblPlantsGene:GLYMA_04G057400 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0004525 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006396 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016442 | GO:GO:0016787 | GO:GO:0016891 |
| GO:GO:0030422 | GO:GO:0031047 | GO:GO:0040029 | GO:GO:0090501 | GO:GO:0090502 | InterPro:Helicase/UvrB_N |
| InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR000999 | InterPro:IPR001650 | InterPro:IPR003100 | InterPro:IPR005034 |
| InterPro:IPR014001 | InterPro:IPR014720 | InterPro:IPR036389 | InterPro:IPR038248 | UniProt:K7KIB7 | EnsemblPlants:KRH61605 |
| ProteinID:KRH61605 | ProteinID:KRH61605.1 | InterPro:P-loop_NTPase | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF00271 |
| PFAM:PF00636 | PFAM:PF02170 | PFAM:PF03368 | PFAM:PF04851 | ScanProsite:PS00517 | PFscan:PS50137 |
| PFscan:PS50142 | PFscan:PS50821 | PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51327 | PANTHER:PTHR14950 |
| PANTHER:PTHR14950:SF31 | InterPro:RNase_III_dom | InterPro:RNase_III_sf | SMART:SM00487 | SMART:SM00490 | SMART:SM00535 |
| SMART:SM00949 | SUPFAM:SSF101690 | SUPFAM:SSF52540 | SUPFAM:SSF69065 | UniParc:UPI0002969FC5 | InterPro:dsRBD_dom |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:4646833..4666956
Molecular Weight (calculated)
188031.0 Da
IEP (calculated)
6.733
GRAVY (calculated)
-0.270
Length
1674 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNSNIDSTDH SQDQSRKRNL PDADDSPAPN FHIDSSDHNQ DQSKKRKQPN DEDSPSLESP CSNMNPRRYQ IEVYEVARRR NTIAVLDTGS GKTLIAVMLM
0101: KEVGQAIKTS GVKKLIIFLA PTVHLVNQQF KNIKFLTDFQ VEEYYGAKGV DTWTLKTWEK EISNNDVLVM TPQILLDALR KAFLRMEMIC LIVIDECHRT
0201: IGNHPYTKIM KEFYHQANEK PKIFGMTASP VGKKGVSSTM DCEDQISELE SILDSQRYTV EDRTEMDRCV PSAKESCRYY DQARFSALSL KPKIEALSFK
0301: FDALLSENQS NYKDVENKFK TLSQRMSNEL AKILHCLEDL GILCAYEAVK ICHENFSKSE GECEIYRKGY LQCITFLEEV IKLIEESLHL ADKKILEVDF
0401: NYSQAEDLGY ISPKLIELIK LFQSFGESSQ VLCLIFVDRI ITAKVIQRFA KTVPNISHFT VSYLTGNNTS VDALAPKRQK EILDSFRSGK VNLLFTTDVL
0501: EEGIHVPNCS CVIRFDLPKT VRSYVQSRGR SRQANSQFVV MLERGNLKQR DQLFDIIRSE RSMTDASIYK EHESSLRACM VGKTNAYYVE STGASFTLDS
0601: SVSLIHRYCG TLPRDKYSCV KPNFEFLSVE GGYQCKLILP SNSAFQTIIG PSGKDMRLAK HLACFEACKK LHQMGALNEH LVPLIEDSSE DDHIVKNKES
0701: SSGAGTTKRK ELHGKANIHA LSGAWGDKLT RVKFNAYKFE FTCNIVSEIY SGFALLIESE LDEDVGNVNL DLYLVSKIVK ASVSSCGQVD LDAEQMMRAK
0801: CFHELFFNGL FGRLVLKSKS AGEREFLLQK DTNSLWSPKH LYLLLPLEKL NDICEGSLQI NWCGINSCAS AIKFLRRKFS LVTGDCDDNG TITSPHDTSS
0901: SEMECVGANK IHFANCVVDA DNIKDRVVLA IHTGKIYCII EIDSNLSAES PFYGNNEKSK ESITFSDYFS KSYGISLRHP GQPMLRLKQS HNPHNLLFNF
1001: YEEDARDKSS KIGPAASKLP VHVHIPPELL YILDVKRDVL KSLYLLPSLM YRIESLMLSS QLREEIDGQT SKFNIRSSLI LESLTTLRCS ESFSMERLEL
1101: LGDSVLKYVV SCHLFLKYPK KHEGQLSARR SSAVCNSTLH KLGTDRKLQG YIRDSAFEPR RWVAPGQRSI HLVCCDCGLE TLEVPLDAKF HTEDPKVVVG
1201: KFCDRGHCWM CSKTIADCVE ALIGAYYVDG GLFASLNVMK WLGIGAELEL SLVDEAITAA SLRTCLPKES EIASLEKKIG YEFSVKGLLL EAITHLSEKE
1301: LGIGCCYERL EFLGDSVLDL LITWHLYQSH TDIDPGVLTD LRSASVNNDN FAQVAVRHNL HQHLLHSSGL LLSQISEYVK VISESDPRSL PSISAPKALG
1401: DVVESIVGAI LIDTKLSLDQ VWNVFYSLLS PIVTPDKLEL PPFRELNELC DSLGYFVKVK ENCEKVGSAM HVEVSVQLPN ALLVREGKGA NKKTAKGEAA
1501: FYLLKDLEKQ GISHGSFMSK GKRDNPDHVY GSSHLKMDSS ILIEEHSSEP ASHKRHILDE TNLTAINLSI NMKKGGPRTT LYEVCKKLQW PVPTFDSTEY
1601: KDRSLFESCE GLQGSKGQNC FVSKITLCIP NYGNIESKGE ARSDKKTSFD SAAVQMLLEL QRLGKVEIDP LPSS
0101: KEVGQAIKTS GVKKLIIFLA PTVHLVNQQF KNIKFLTDFQ VEEYYGAKGV DTWTLKTWEK EISNNDVLVM TPQILLDALR KAFLRMEMIC LIVIDECHRT
0201: IGNHPYTKIM KEFYHQANEK PKIFGMTASP VGKKGVSSTM DCEDQISELE SILDSQRYTV EDRTEMDRCV PSAKESCRYY DQARFSALSL KPKIEALSFK
0301: FDALLSENQS NYKDVENKFK TLSQRMSNEL AKILHCLEDL GILCAYEAVK ICHENFSKSE GECEIYRKGY LQCITFLEEV IKLIEESLHL ADKKILEVDF
0401: NYSQAEDLGY ISPKLIELIK LFQSFGESSQ VLCLIFVDRI ITAKVIQRFA KTVPNISHFT VSYLTGNNTS VDALAPKRQK EILDSFRSGK VNLLFTTDVL
0501: EEGIHVPNCS CVIRFDLPKT VRSYVQSRGR SRQANSQFVV MLERGNLKQR DQLFDIIRSE RSMTDASIYK EHESSLRACM VGKTNAYYVE STGASFTLDS
0601: SVSLIHRYCG TLPRDKYSCV KPNFEFLSVE GGYQCKLILP SNSAFQTIIG PSGKDMRLAK HLACFEACKK LHQMGALNEH LVPLIEDSSE DDHIVKNKES
0701: SSGAGTTKRK ELHGKANIHA LSGAWGDKLT RVKFNAYKFE FTCNIVSEIY SGFALLIESE LDEDVGNVNL DLYLVSKIVK ASVSSCGQVD LDAEQMMRAK
0801: CFHELFFNGL FGRLVLKSKS AGEREFLLQK DTNSLWSPKH LYLLLPLEKL NDICEGSLQI NWCGINSCAS AIKFLRRKFS LVTGDCDDNG TITSPHDTSS
0901: SEMECVGANK IHFANCVVDA DNIKDRVVLA IHTGKIYCII EIDSNLSAES PFYGNNEKSK ESITFSDYFS KSYGISLRHP GQPMLRLKQS HNPHNLLFNF
1001: YEEDARDKSS KIGPAASKLP VHVHIPPELL YILDVKRDVL KSLYLLPSLM YRIESLMLSS QLREEIDGQT SKFNIRSSLI LESLTTLRCS ESFSMERLEL
1101: LGDSVLKYVV SCHLFLKYPK KHEGQLSARR SSAVCNSTLH KLGTDRKLQG YIRDSAFEPR RWVAPGQRSI HLVCCDCGLE TLEVPLDAKF HTEDPKVVVG
1201: KFCDRGHCWM CSKTIADCVE ALIGAYYVDG GLFASLNVMK WLGIGAELEL SLVDEAITAA SLRTCLPKES EIASLEKKIG YEFSVKGLLL EAITHLSEKE
1301: LGIGCCYERL EFLGDSVLDL LITWHLYQSH TDIDPGVLTD LRSASVNNDN FAQVAVRHNL HQHLLHSSGL LLSQISEYVK VISESDPRSL PSISAPKALG
1401: DVVESIVGAI LIDTKLSLDQ VWNVFYSLLS PIVTPDKLEL PPFRELNELC DSLGYFVKVK ENCEKVGSAM HVEVSVQLPN ALLVREGKGA NKKTAKGEAA
1501: FYLLKDLEKQ GISHGSFMSK GKRDNPDHVY GSSHLKMDSS ILIEEHSSEP ASHKRHILDE TNLTAINLSI NMKKGGPRTT LYEVCKKLQW PVPTFDSTEY
1601: KDRSLFESCE GLQGSKGQNC FVSKITLCIP NYGNIESKGE ARSDKKTSFD SAAVQMLLEL QRLGKVEIDP LPSS
0001: MHSSLEPEKM EEGGGSNSLK RKFSEIDGDQ NLDSVSSPMM TDSNGSYELK VYEVAKNRNI IAVLGTGIDK SEITKRLIKA MGSSDTDKRL IIFLAPTVNL
0101: VKQQCCEIRA LVNLKVEEYF GAKGVDKWTS QRWDEEFSKH DVLVMTPQIL LDVLRSAFLK LEMVCLLIID ECHHTTGNHP YAKLMKEFYH ESTSKPKIFG
0201: LTASAVIRKG IVSSPSNYAA QVSELERLMD SKIFNPEERE GVEKFATTVK EGPILYNPSP SCSLELKEKL ETSHLKFDAS LRRLQELGKD SFLNMDNKFE
0301: TYQKRLSIDY REILHCLDNL GLICAHLAAE VCLEKISDTK EESETYKECS MVCKEFLEDI LSTIGVYLPQ DDKSLVDLQQ NHLSAVISGH VSPKLKELFH
0401: LLDSFRGDKQ KQCLILVERI ITAKVIERFV KKEASLAYLN VLYLTENNPS TNVSAQKMQI EIPDLFQHGK VNLLFITDVV EEGFQVPDCS CMVCFDLPKT
0501: MCSYSQSQKH AKQSNSKSIM FLERGNPKQR DHLHDLMRRE VLIQDPEAPN LKSCPPPVKN GHGVKEIGSM VIPDSNITVS EEAASTQTMS DPPSRNEQLP
0601: PCKKLRLDNN LLQSNGKEKV ASSKSKSSSS AAGSKKRKEL HGTTCANALS GTWGENIDGA TFQAYKFDFC CNISGEVYSS FSLLLESTLA EDVGKVEMDL
0701: YLVRKLVKAS VSPCGQIRLS QEELVKAKYF QQFFFNGMFG KLFVGSKSQG TKREFLLQTD TSSLWHPAFM FLLLPVETND LASSATIDWS AINSCASIVE
0801: FLKKNSLLDL RDSDGNQCNT SSGQEVLLDD KMEETNLIHF ANASSDKNSL EELVVIAIHT GRIYSIVEAV SDSSAMSPFE VDASSGYATY AEYFNKKYGI
0901: VLAHPNQPLM KLKQSHHAHN LLVDFNEEMV VKTEPKAGNV RKRKPNIHAH LPPELLARID VPRAVLKSIY LLPSVMHRLE SLMLASQLRE EIDCSIDNFS
1001: ISSTSILEAV TTLTCPESFS MERLELLGDS VLKYVASCHL FLKYPDKDEG QLSRQRQSII SNSNLHRLTT SRKLQGYIRN GAFEPRRWTA PGQFSLFPVP
1101: CKCGIDTREV PLDPKFFTEN MTIKIGKSCD MGHRWVVSKS VSDCAEALIG AYYVSGGLSA SLHMMKWLGI DVDFDPNLVV EAINRVSLRC YIPKEDELIE
1201: LERKIQHEFS AKFLLKEAIT HSSLRESYSY ERLEFLGDSV LDFLITRHLF NTYEQTGPGE MTDLRSACVN NENFAQVAVK NNLHTHLQRC ATVLETQIND
1301: YLMSFQKPDE TGRSIPSIQG PKALGDVVES IAGALLIDTR LDLDQVWRVF EPLLSPLVTP DKLQLPPYRE LNELCDSLGY FFRVKCSNDG VKAQATIQLQ
1401: LDDVLLTGDG SEQTNKLALG KAASHLLTQL EKRNISRKTS LGDNQSSMDV NLACNHSDRE TLTSETTEIQ SIVIPFIGPI NMKKGGPRGT LHEFCKKHLW
1501: PMPTFDTSEE KSRTPFEFID GGEKRTSFSS FTSTITLRIP NREAVMYAGE ARPDKKSSFD SAVVELLYEL ERRKIVIIQK
0101: VKQQCCEIRA LVNLKVEEYF GAKGVDKWTS QRWDEEFSKH DVLVMTPQIL LDVLRSAFLK LEMVCLLIID ECHHTTGNHP YAKLMKEFYH ESTSKPKIFG
0201: LTASAVIRKG IVSSPSNYAA QVSELERLMD SKIFNPEERE GVEKFATTVK EGPILYNPSP SCSLELKEKL ETSHLKFDAS LRRLQELGKD SFLNMDNKFE
0301: TYQKRLSIDY REILHCLDNL GLICAHLAAE VCLEKISDTK EESETYKECS MVCKEFLEDI LSTIGVYLPQ DDKSLVDLQQ NHLSAVISGH VSPKLKELFH
0401: LLDSFRGDKQ KQCLILVERI ITAKVIERFV KKEASLAYLN VLYLTENNPS TNVSAQKMQI EIPDLFQHGK VNLLFITDVV EEGFQVPDCS CMVCFDLPKT
0501: MCSYSQSQKH AKQSNSKSIM FLERGNPKQR DHLHDLMRRE VLIQDPEAPN LKSCPPPVKN GHGVKEIGSM VIPDSNITVS EEAASTQTMS DPPSRNEQLP
0601: PCKKLRLDNN LLQSNGKEKV ASSKSKSSSS AAGSKKRKEL HGTTCANALS GTWGENIDGA TFQAYKFDFC CNISGEVYSS FSLLLESTLA EDVGKVEMDL
0701: YLVRKLVKAS VSPCGQIRLS QEELVKAKYF QQFFFNGMFG KLFVGSKSQG TKREFLLQTD TSSLWHPAFM FLLLPVETND LASSATIDWS AINSCASIVE
0801: FLKKNSLLDL RDSDGNQCNT SSGQEVLLDD KMEETNLIHF ANASSDKNSL EELVVIAIHT GRIYSIVEAV SDSSAMSPFE VDASSGYATY AEYFNKKYGI
0901: VLAHPNQPLM KLKQSHHAHN LLVDFNEEMV VKTEPKAGNV RKRKPNIHAH LPPELLARID VPRAVLKSIY LLPSVMHRLE SLMLASQLRE EIDCSIDNFS
1001: ISSTSILEAV TTLTCPESFS MERLELLGDS VLKYVASCHL FLKYPDKDEG QLSRQRQSII SNSNLHRLTT SRKLQGYIRN GAFEPRRWTA PGQFSLFPVP
1101: CKCGIDTREV PLDPKFFTEN MTIKIGKSCD MGHRWVVSKS VSDCAEALIG AYYVSGGLSA SLHMMKWLGI DVDFDPNLVV EAINRVSLRC YIPKEDELIE
1201: LERKIQHEFS AKFLLKEAIT HSSLRESYSY ERLEFLGDSV LDFLITRHLF NTYEQTGPGE MTDLRSACVN NENFAQVAVK NNLHTHLQRC ATVLETQIND
1301: YLMSFQKPDE TGRSIPSIQG PKALGDVVES IAGALLIDTR LDLDQVWRVF EPLLSPLVTP DKLQLPPYRE LNELCDSLGY FFRVKCSNDG VKAQATIQLQ
1401: LDDVLLTGDG SEQTNKLALG KAASHLLTQL EKRNISRKTS LGDNQSSMDV NLACNHSDRE TLTSETTEIQ SIVIPFIGPI NMKKGGPRGT LHEFCKKHLW
1501: PMPTFDTSEE KSRTPFEFID GGEKRTSFSS FTSTITLRIP NREAVMYAGE ARPDKKSSFD SAVVELLYEL ERRKIVIIQK
Arabidopsis Description
DCL3Endoribonuclease Dicer homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXW7]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.