Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG33962 | Sorghum | nucleus | 73.35 | 73.08 |
| Zm00001d042432_P007 | Maize | cytosol | 72.2 | 71.46 |
| TraesCS3D01G411200.6 | Wheat | nucleus | 69.35 | 70.07 |
| TraesCS3A01G415400.2 | Wheat | nucleus | 70.99 | 69.85 |
| TraesCS3B01G450600.3 | Wheat | nucleus | 70.5 | 69.41 |
| HORVU3Hr1G092430.9 | Barley | cytosol, nucleus, plastid | 69.59 | 68.19 |
| GSMUA_Achr10P... | Banana | nucleus | 23.38 | 58.22 |
| KRH61605 | Soybean | nucleus | 49.79 | 49.1 |
| GSMUA_Achr10P... | Banana | cytosol | 12.54 | 48.94 |
| Solyc08g067210.2.1 | Tomato | nucleus | 41.67 | 48.11 |
| Os10t0485600-01 | Rice | cytosol, plastid | 46.34 | 46.73 |
| KRH52276 | Soybean | cytosol | 13.99 | 45.92 |
| AT3G43920.2 | Thale cress | cytosol, nucleus, plastid | 41.19 | 43.04 |
| CDY30942 | Canola | nucleus | 32.04 | 41.95 |
| Bra019456.1-P | Field mustard | nucleus | 36.16 | 41.26 |
| CDY21223 | Canola | nucleus | 37.86 | 40.82 |
| VIT_04s0008g02170.t01 | Wine grape | mitochondrion | 45.25 | 38.45 |
| Os09t0315050-00 | Rice | cytosol, extracellular, nucleus | 2.73 | 31.47 |
| Os06t0358800-01 | Rice | cytosol | 5.63 | 31.1 |
| Os03t0583900-01 | Rice | nucleus | 25.68 | 30.07 |
| Os05t0271300-00 | Rice | cytosol, nucleus, plastid | 5.63 | 29.34 |
| Os01t0551100-01 | Rice | cytosol | 4.54 | 29.3 |
| Os04t0509300-02 | Rice | cytosol | 28.53 | 28.42 |
| Os03t0121800-01 | Rice | cytosol, nucleus, plasma membrane | 29.86 | 26.18 |
Protein Annotations
| Gene3D:1.10.1520.10 | MapMan:12.5.1.8 | Gene3D:2.170.260.10 | Gene3D:3.30.160.20 | Gene3D:3.30.160.380 | Gene3D:3.40.50.300 |
| EntrezGene:4324864 | EMBL:AK120075 | ProteinID:BAD82327.1 | ProteinID:BAF07062.1 | ProteinID:BAS75821.1 | ncoils:Coil |
| InterPro:Dicer_dimer_sf | InterPro:Dicer_dimerisation_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004386 | GO:GO:0004518 | GO:GO:0004519 | GO:GO:0004525 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016442 | GO:GO:0016787 | GO:GO:0016891 | GO:GO:0030422 | GO:GO:0031047 |
| GO:GO:0040029 | GO:GO:0046872 | GO:GO:0090305 | GO:GO:0090501 | GO:GO:0090502 | InterPro:Helicase/UvrB_N |
| InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR000999 | InterPro:IPR001650 | InterPro:IPR003100 | InterPro:IPR005034 |
| InterPro:IPR014001 | InterPro:IPR036389 | InterPro:IPR038248 | EnsemblPlantsGene:Os01g0909200 | EnsemblPlants:Os01t0909200-01 | InterPro:P-loop_NTPase |
| InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF00271 | PFAM:PF00636 | PFAM:PF02170 | PFAM:PF03368 |
| PFAM:PF04851 | ScanProsite:PS00517 | PFscan:PS50142 | PFscan:PS50821 | PFscan:PS51192 | PFscan:PS51194 |
| PFscan:PS51327 | PANTHER:PTHR14950 | PANTHER:PTHR14950:SF31 | UniProt:Q5N870 | InterPro:RNase_III_dom | InterPro:RNase_III_sf |
| SMART:SM00487 | SMART:SM00490 | SMART:SM00535 | SMART:SM00949 | SUPFAM:SSF101690 | SUPFAM:SSF52540 |
| SUPFAM:SSF69065 | UniParc:UPI000049EA07 | RefSeq:XP_015621462.1 | SEG:seg | : | : |
Description
DICER-LIKE 3ADEAD-like helicase, N-terminal domain containing protein. (Os01t0909200-01)
Coordinates
chr1:-:39595682..39606227
Molecular Weight (calculated)
184903.0 Da
IEP (calculated)
6.831
GRAVY (calculated)
-0.221
Length
1651 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNPLKRSLES SSQEHEAGKQ KLQKRECQDF TPRRYQLDVY EVAMRRNTIA MLDTGAGKTM IAVMLIKEFG KINRTKNAGK VIIFLAPTVQ LVTQQCEVIE
0101: IHTDFEVEQY YGAKGVDQWT GPRWQEQISK YQVMVMTPQV FLQALRNAFL ILDMVSLMIF DECHHATGNH PYTRIMKEFY HKSEHKPSVF GMTASPVIRK
0201: GISSHLDCEG QFCELENLLD AKIYTVSDRE EIEFCVPSAK EMCRYYDSKP VCFEDLSEEL GVLCSKYDAL ITELQNKRSD MYKDADDITK ESKRRLSKSI
0301: AKICYCLDDV GLICASEATK ICIERGQEKG WLKEVVDATD QQTDANGSRL FAENSALHMK FFEEALHLID KRLQQGIDML LNSESGCVEA AKTGYISPKL
0401: YELIQIFHSF SNSRHARCLI FVDRKITARV IDRMIKKIGH LAHFTVSFLT GGRSSVDALT PKMQKDTLDS FRSGKVNLLF TTDVAEEGIH VPECSCVIRF
0501: DLPRTTRSYV QSRGRARQED SQYILMIERG NVKQNDLISA IVRSETSMVK IASSRESGNL SPGFVPNEEI NEYHVGTTGA KVTADSSISI VYRYCEKLPQ
0601: DKCYSPKPTF EFTHHDDGYV CTLALPPSAV LQILVGPKAR NMHKAKQLVC LDACKKLHEL GALDDHLCLS VEDPVPEIVS KNKGTGIGTT KRKELHGTTR
0701: IHAWSGNWVS KKTALKLQSY KMNFVCDQAG QIYSEFVLLI DATLPDEVAT LEIDLYLHDK MVKTSVSSCG LLELDAQQME QAKLFQGLLF NGLFGKLFTR
0801: SKVPNAPREF ILNKEDTFVW NTASVYLLLP TNPSFDSNVC INWSVIDAAA TAVKLMRRIY SENKRELLGI FDSDQNVGDL IHLANKSCKA NSLKDMVVLA
0901: VHTGKIYTAL DITELSGDSA FDGASDKKEC KFRTFAEYFK KKYGIVLRHP SQPLLVLKPS HNPHNLLSSK FRDEGNVVEN MSNGTPVVNK TSNRVHMPPE
1001: LLIPLDLPVE ILRSFYLFPA LMYRIESLTL ASQLRSEIGY SDSNISSFLI LEAITTLRCS EDFSMERLEL LGDSVLKYAV SCHLFLKFPN KDEGQLSSIR
1101: CHMICNATLY KLGIERNVQG YVRDAAFDPR RWLAPGQLSI RPSPCECPVK SEVVTDDIHI IDDKAIVLGK ACDKGHRWMC SKTIADCVEA IIGAYYAGGG
1201: LRAAMAVLKW LGIGAEIEED LIVQAILSAS VQTYLPKDNV FEMLEAKLGY SFSVKGLLVE ALTHPSQQEL GAKYCYERLE FLGDAVLDIL LTRYLFNSHK
1301: DTNEGELTDL RSASVNNENF AQVAVKHNFH HFLQHSSGLL LDQITEYVNR LEGSSMDKVE LLSDGLPKGP KVLGDIVESI AGAILLDTKL DLDVVWGIFE
1401: PLLSPIVTPE NLELPPYREL IEWCGKHGYF VGINCRDQGD TVVATLDVQL KEVLLVRQGF SKKRKDAKAH ASSLLLKDLE EKGLIIPKNA SKTEQFEKHC
1501: GSTNPFNNLH VDAMDTQTPK PTKEKNAADS RNISDPLLGK PLHVIVKTSK GGPRIALYEL CKKLQWPMPT MESEKVQPSF SSVCSSPGGS SQKATPQAFA
1601: FASTITLHIP NADVISLTGD GRADKKSSQD SAALFLLYEL QRRGTLQLQE V
0101: IHTDFEVEQY YGAKGVDQWT GPRWQEQISK YQVMVMTPQV FLQALRNAFL ILDMVSLMIF DECHHATGNH PYTRIMKEFY HKSEHKPSVF GMTASPVIRK
0201: GISSHLDCEG QFCELENLLD AKIYTVSDRE EIEFCVPSAK EMCRYYDSKP VCFEDLSEEL GVLCSKYDAL ITELQNKRSD MYKDADDITK ESKRRLSKSI
0301: AKICYCLDDV GLICASEATK ICIERGQEKG WLKEVVDATD QQTDANGSRL FAENSALHMK FFEEALHLID KRLQQGIDML LNSESGCVEA AKTGYISPKL
0401: YELIQIFHSF SNSRHARCLI FVDRKITARV IDRMIKKIGH LAHFTVSFLT GGRSSVDALT PKMQKDTLDS FRSGKVNLLF TTDVAEEGIH VPECSCVIRF
0501: DLPRTTRSYV QSRGRARQED SQYILMIERG NVKQNDLISA IVRSETSMVK IASSRESGNL SPGFVPNEEI NEYHVGTTGA KVTADSSISI VYRYCEKLPQ
0601: DKCYSPKPTF EFTHHDDGYV CTLALPPSAV LQILVGPKAR NMHKAKQLVC LDACKKLHEL GALDDHLCLS VEDPVPEIVS KNKGTGIGTT KRKELHGTTR
0701: IHAWSGNWVS KKTALKLQSY KMNFVCDQAG QIYSEFVLLI DATLPDEVAT LEIDLYLHDK MVKTSVSSCG LLELDAQQME QAKLFQGLLF NGLFGKLFTR
0801: SKVPNAPREF ILNKEDTFVW NTASVYLLLP TNPSFDSNVC INWSVIDAAA TAVKLMRRIY SENKRELLGI FDSDQNVGDL IHLANKSCKA NSLKDMVVLA
0901: VHTGKIYTAL DITELSGDSA FDGASDKKEC KFRTFAEYFK KKYGIVLRHP SQPLLVLKPS HNPHNLLSSK FRDEGNVVEN MSNGTPVVNK TSNRVHMPPE
1001: LLIPLDLPVE ILRSFYLFPA LMYRIESLTL ASQLRSEIGY SDSNISSFLI LEAITTLRCS EDFSMERLEL LGDSVLKYAV SCHLFLKFPN KDEGQLSSIR
1101: CHMICNATLY KLGIERNVQG YVRDAAFDPR RWLAPGQLSI RPSPCECPVK SEVVTDDIHI IDDKAIVLGK ACDKGHRWMC SKTIADCVEA IIGAYYAGGG
1201: LRAAMAVLKW LGIGAEIEED LIVQAILSAS VQTYLPKDNV FEMLEAKLGY SFSVKGLLVE ALTHPSQQEL GAKYCYERLE FLGDAVLDIL LTRYLFNSHK
1301: DTNEGELTDL RSASVNNENF AQVAVKHNFH HFLQHSSGLL LDQITEYVNR LEGSSMDKVE LLSDGLPKGP KVLGDIVESI AGAILLDTKL DLDVVWGIFE
1401: PLLSPIVTPE NLELPPYREL IEWCGKHGYF VGINCRDQGD TVVATLDVQL KEVLLVRQGF SKKRKDAKAH ASSLLLKDLE EKGLIIPKNA SKTEQFEKHC
1501: GSTNPFNNLH VDAMDTQTPK PTKEKNAADS RNISDPLLGK PLHVIVKTSK GGPRIALYEL CKKLQWPMPT MESEKVQPSF SSVCSSPGGS SQKATPQAFA
1601: FASTITLHIP NADVISLTGD GRADKKSSQD SAALFLLYEL QRRGTLQLQE V
0001: MHSSLEPEKM EEGGGSNSLK RKFSEIDGDQ NLDSVSSPMM TDSNGSYELK VYEVAKNRNI IAVLGTGIDK SEITKRLIKA MGSSDTDKRL IIFLAPTVNL
0101: VKQQCCEIRA LVNLKVEEYF GAKGVDKWTS QRWDEEFSKH DVLVMTPQIL LDVLRSAFLK LEMVCLLIID ECHHTTGNHP YAKLMKEFYH ESTSKPKIFG
0201: LTASAVIRKG IVSSPSNYAA QVSELERLMD SKIFNPEERE GVEKFATTVK EGPILYNPSP SCSLELKEKL ETSHLKFDAS LRRLQELGKD SFLNMDNKFE
0301: TYQKRLSIDY REILHCLDNL GLICAHLAAE VCLEKISDTK EESETYKECS MVCKEFLEDI LSTIGVYLPQ DDKSLVDLQQ NHLSAVISGH VSPKLKELFH
0401: LLDSFRGDKQ KQCLILVERI ITAKVIERFV KKEASLAYLN VLYLTENNPS TNVSAQKMQI EIPDLFQHGK VNLLFITDVV EEGFQVPDCS CMVCFDLPKT
0501: MCSYSQSQKH AKQSNSKSIM FLERGNPKQR DHLHDLMRRE VLIQDPEAPN LKSCPPPVKN GHGVKEIGSM VIPDSNITVS EEAASTQTMS DPPSRNEQLP
0601: PCKKLRLDNN LLQSNGKEKV ASSKSKSSSS AAGSKKRKEL HGTTCANALS GTWGENIDGA TFQAYKFDFC CNISGEVYSS FSLLLESTLA EDVGKVEMDL
0701: YLVRKLVKAS VSPCGQIRLS QEELVKAKYF QQFFFNGMFG KLFVGSKSQG TKREFLLQTD TSSLWHPAFM FLLLPVETND LASSATIDWS AINSCASIVE
0801: FLKKNSLLDL RDSDGNQCNT SSGQEVLLDD KMEETNLIHF ANASSDKNSL EELVVIAIHT GRIYSIVEAV SDSSAMSPFE VDASSGYATY AEYFNKKYGI
0901: VLAHPNQPLM KLKQSHHAHN LLVDFNEEMV VKTEPKAGNV RKRKPNIHAH LPPELLARID VPRAVLKSIY LLPSVMHRLE SLMLASQLRE EIDCSIDNFS
1001: ISSTSILEAV TTLTCPESFS MERLELLGDS VLKYVASCHL FLKYPDKDEG QLSRQRQSII SNSNLHRLTT SRKLQGYIRN GAFEPRRWTA PGQFSLFPVP
1101: CKCGIDTREV PLDPKFFTEN MTIKIGKSCD MGHRWVVSKS VSDCAEALIG AYYVSGGLSA SLHMMKWLGI DVDFDPNLVV EAINRVSLRC YIPKEDELIE
1201: LERKIQHEFS AKFLLKEAIT HSSLRESYSY ERLEFLGDSV LDFLITRHLF NTYEQTGPGE MTDLRSACVN NENFAQVAVK NNLHTHLQRC ATVLETQIND
1301: YLMSFQKPDE TGRSIPSIQG PKALGDVVES IAGALLIDTR LDLDQVWRVF EPLLSPLVTP DKLQLPPYRE LNELCDSLGY FFRVKCSNDG VKAQATIQLQ
1401: LDDVLLTGDG SEQTNKLALG KAASHLLTQL EKRNISRKTS LGDNQSSMDV NLACNHSDRE TLTSETTEIQ SIVIPFIGPI NMKKGGPRGT LHEFCKKHLW
1501: PMPTFDTSEE KSRTPFEFID GGEKRTSFSS FTSTITLRIP NREAVMYAGE ARPDKKSSFD SAVVELLYEL ERRKIVIIQK
0101: VKQQCCEIRA LVNLKVEEYF GAKGVDKWTS QRWDEEFSKH DVLVMTPQIL LDVLRSAFLK LEMVCLLIID ECHHTTGNHP YAKLMKEFYH ESTSKPKIFG
0201: LTASAVIRKG IVSSPSNYAA QVSELERLMD SKIFNPEERE GVEKFATTVK EGPILYNPSP SCSLELKEKL ETSHLKFDAS LRRLQELGKD SFLNMDNKFE
0301: TYQKRLSIDY REILHCLDNL GLICAHLAAE VCLEKISDTK EESETYKECS MVCKEFLEDI LSTIGVYLPQ DDKSLVDLQQ NHLSAVISGH VSPKLKELFH
0401: LLDSFRGDKQ KQCLILVERI ITAKVIERFV KKEASLAYLN VLYLTENNPS TNVSAQKMQI EIPDLFQHGK VNLLFITDVV EEGFQVPDCS CMVCFDLPKT
0501: MCSYSQSQKH AKQSNSKSIM FLERGNPKQR DHLHDLMRRE VLIQDPEAPN LKSCPPPVKN GHGVKEIGSM VIPDSNITVS EEAASTQTMS DPPSRNEQLP
0601: PCKKLRLDNN LLQSNGKEKV ASSKSKSSSS AAGSKKRKEL HGTTCANALS GTWGENIDGA TFQAYKFDFC CNISGEVYSS FSLLLESTLA EDVGKVEMDL
0701: YLVRKLVKAS VSPCGQIRLS QEELVKAKYF QQFFFNGMFG KLFVGSKSQG TKREFLLQTD TSSLWHPAFM FLLLPVETND LASSATIDWS AINSCASIVE
0801: FLKKNSLLDL RDSDGNQCNT SSGQEVLLDD KMEETNLIHF ANASSDKNSL EELVVIAIHT GRIYSIVEAV SDSSAMSPFE VDASSGYATY AEYFNKKYGI
0901: VLAHPNQPLM KLKQSHHAHN LLVDFNEEMV VKTEPKAGNV RKRKPNIHAH LPPELLARID VPRAVLKSIY LLPSVMHRLE SLMLASQLRE EIDCSIDNFS
1001: ISSTSILEAV TTLTCPESFS MERLELLGDS VLKYVASCHL FLKYPDKDEG QLSRQRQSII SNSNLHRLTT SRKLQGYIRN GAFEPRRWTA PGQFSLFPVP
1101: CKCGIDTREV PLDPKFFTEN MTIKIGKSCD MGHRWVVSKS VSDCAEALIG AYYVSGGLSA SLHMMKWLGI DVDFDPNLVV EAINRVSLRC YIPKEDELIE
1201: LERKIQHEFS AKFLLKEAIT HSSLRESYSY ERLEFLGDSV LDFLITRHLF NTYEQTGPGE MTDLRSACVN NENFAQVAVK NNLHTHLQRC ATVLETQIND
1301: YLMSFQKPDE TGRSIPSIQG PKALGDVVES IAGALLIDTR LDLDQVWRVF EPLLSPLVTP DKLQLPPYRE LNELCDSLGY FFRVKCSNDG VKAQATIQLQ
1401: LDDVLLTGDG SEQTNKLALG KAASHLLTQL EKRNISRKTS LGDNQSSMDV NLACNHSDRE TLTSETTEIQ SIVIPFIGPI NMKKGGPRGT LHEFCKKHLW
1501: PMPTFDTSEE KSRTPFEFID GGEKRTSFSS FTSTITLRIP NREAVMYAGE ARPDKKSSFD SAVVELLYEL ERRKIVIIQK
Arabidopsis Description
DCL3Endoribonuclease Dicer homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXW7]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.