Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 4
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g067210.2.1 | Tomato | nucleus | 44.36 | 60.28 |
| GSMUA_Achr10P... | Banana | nucleus | 19.97 | 58.52 |
| KRH52276 | Soybean | cytosol | 14.0 | 54.08 |
| GSMUA_Achr10P... | Banana | cytosol | 11.68 | 53.66 |
| KRH61605 | Soybean | nucleus | 46.22 | 53.64 |
| TraesCS1B01G177600.1 | Wheat | nucleus | 27.95 | 52.41 |
| CDY30942 | Canola | nucleus | 33.97 | 52.34 |
| Bra019456.1-P | Field mustard | nucleus | 35.15 | 47.2 |
| GSMUA_Achr5P10880_001 | Banana | cytosol | 38.03 | 46.25 |
| AT3G43920.2 | Thale cress | cytosol, nucleus, plastid | 37.57 | 46.2 |
| KXG33962 | Sorghum | nucleus | 38.81 | 45.5 |
| CDY21223 | Canola | nucleus | 35.82 | 45.46 |
| TraesCS1A01G160900.1 | Wheat | nucleus | 38.03 | 45.42 |
| Os01t0909200-01 | Rice | cytosol | 38.45 | 45.25 |
| Zm00001d042432_P007 | Maize | cytosol | 38.75 | 45.14 |
| TraesCS1D01G158000.2 | Wheat | nucleus | 37.67 | 44.96 |
| Os10t0485600-01 | Rice | cytosol, plastid | 37.67 | 44.72 |
| Zm00001d032655_P006 | Maize | nucleus | 35.51 | 43.95 |
| OQU91611 | Sorghum | nucleus, plastid | 36.95 | 43.86 |
| HORVU1Hr1G042710.5 | Barley | cytosol, mitochondrion, nucleus | 37.98 | 43.85 |
| TraesCS3A01G415400.2 | Wheat | nucleus | 37.06 | 42.91 |
| TraesCS3B01G450600.3 | Wheat | nucleus | 36.95 | 42.81 |
| TraesCS3D01G411200.6 | Wheat | nucleus | 35.72 | 42.47 |
| HORVU3Hr1G092430.9 | Barley | cytosol, nucleus, plastid | 36.59 | 42.2 |
| VIT_12s0059g01120.t01 | Wine grape | cytosol | 4.79 | 32.4 |
| VIT_11s0149g00120.t01 | Wine grape | cytosol | 19.56 | 30.67 |
| VIT_19s0090g00940.t01 | Wine grape | cytosol | 5.15 | 29.67 |
| VIT_04s0023g00920.t01 | Wine grape | cytosol, nucleus, plastid | 19.35 | 26.95 |
| VIT_15s0048g02380.t01 | Wine grape | cytosol, nucleus, plastid | 23.26 | 23.2 |
| VIT_04s0008g02150.t01 | Wine grape | cytosol | 4.01 | 22.54 |
| VIT_11s0149g00100.t01 | Wine grape | cytosol | 1.18 | 11.44 |
Protein Annotations
| KEGG:00230+2.7.7.7 | KEGG:00240+2.7.7.7 | Gene3D:1.10.1520.10 | MapMan:12.5.1.8 | Gene3D:2.170.260.10 | Gene3D:3.30.160.20 |
| Gene3D:3.30.160.380 | Gene3D:3.40.50.300 | EMBL:AM433435 | EMBL:AM480090 | ProteinID:CAN67067 | ProteinID:CAN67067.1 |
| ProteinID:CAN75245 | ProteinID:CAN75245.1 | ProteinID:CCB46625 | ProteinID:CCB46625.1 | InterPro:Dicer_dimer_sf | InterPro:Dicer_dimerisation_dom |
| UniProt:F6H2U0 | EMBL:FN595231 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003723 | GO:GO:0003725 | GO:GO:0003824 | GO:GO:0004017 | GO:GO:0004386 | GO:GO:0004518 |
| GO:GO:0004525 | GO:GO:0004559 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 | GO:GO:0005975 |
| GO:GO:0006013 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006355 | GO:GO:0006396 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009987 | GO:GO:0010216 | GO:GO:0010267 | GO:GO:0015074 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016442 | GO:GO:0016740 | GO:GO:0016758 | GO:GO:0016776 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0016891 | GO:GO:0019205 | GO:GO:0030246 | GO:GO:0030422 |
| GO:GO:0031047 | GO:GO:0040029 | GO:GO:0046939 | GO:GO:0051214 | GO:GO:0051607 | GO:GO:0090501 |
| GO:GO:0090502 | InterPro:Helicase_C | InterPro:IPR000999 | InterPro:IPR001650 | InterPro:IPR003100 | InterPro:IPR005034 |
| InterPro:IPR014720 | InterPro:IPR036389 | InterPro:IPR038248 | InterPro:P-loop_NTPase | InterPro:PAZ_dom | InterPro:PAZ_dom_sf |
| PFAM:PF00271 | PFAM:PF00636 | PFAM:PF02170 | PFAM:PF03368 | PFAM:PF07727 | ScanProsite:PS00517 |
| PFscan:PS50137 | PFscan:PS50142 | PFscan:PS50821 | PFscan:PS51194 | PFscan:PS51327 | PANTHER:PTHR14950 |
| PANTHER:PTHR14950:SF31 | InterPro:RNase_III_dom | InterPro:RNase_III_sf | InterPro:RVT_2 | SMART:SM00490 | SMART:SM00535 |
| SMART:SM00949 | SUPFAM:SSF101690 | SUPFAM:SSF52540 | SUPFAM:SSF54768 | SUPFAM:SSF56672 | SUPFAM:SSF69065 |
| TIGR:TC69894 | UniParc:UPI0002109D5E | ArrayExpress:VIT_04s0008g02170 | EnsemblPlantsGene:VIT_04s0008g02170 | EnsemblPlants:VIT_04s0008g02170.t01 | InterPro:dsRBD_dom |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4:+:1770095..1786509
Molecular Weight (calculated)
216441.0 Da
IEP (calculated)
7.412
GRAVY (calculated)
-0.208
Length
1943 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKCLFLGYSR LQKGYRCYSL ETHRYFISAD VTFFEDSPFF STTSESLPVS EVLPIPIVSP PDAMPPRPLQ VYHRRPRVVA PLPFPEAPAD SLPIPSASPA
0101: PALPSPNDLP IAVRKGTRST RNPHPIYNFL SYHRLSSPYS AFVYAISSVS FPKSTHEALS HPGWRQAMVD EMAALHSNGT WDLVVLPSGK STVGCRWVYA
0201: VKVGPDGQVD RLKARLVAKG YTQVYGSDYG DTFSPVAKIA SVRLLLSMAA MCSWPLYQLD IKNAFLHGDL AEEVYMEQPP GFVAQGESGL VCRLRRSLYG
0301: LKQSPRAWFS RFSSVVQEFG MLRSTADHSV FYHHNSLGQC IYLVVYVDDI VITGSDQDGI QKLKQHLFTH FQTKDLGKLK YFLGIEIAQS SSGVVLSQRK
0401: YALDILEETG MLDCKPVDTP MDPNVKLVPG QGEPLGDPGR YRRLVDADWA GSPTDRRSTS GYCVFIGGNL ISWKSKKQDV VARSSAEAEY RAMALATCEL
0501: IWLRHLLQEL RFGKDEQMKL ICDNQAALHI ASNPVFHERT KHIEVDCHFI REKIASGCVA TSFVNSNDQL ADIFTKSLRG PRIKYICNKL GAYDAVKVCI
0601: ENVSNAQEEF EFYRQSSSQC KCFLQEVLGI IGGYLPHGDG NYLNSESDIL KAVDKGYITP KLHELLQLFQ SFGVARKVLC LIFVERIITA KVIERFIKKI
0701: IYLSHFTVSY LTGSNSSVDA LAPKAQRETL ESFRSGKVNL LFATDVVEEG IHVPNCSCVI RFDLPKTVRS YVQSRGRARQ SDSQFIIMLE RGNTEQRDQL
0801: FDIIRSEYSM TDTATNRDPD GYTLKAYTIE EMDSYFVDST GASVTADSSV SLIHRYCEKL PGDKYFTPKP FFHFTYLEGM YECKLTLPPN AAFQTIIGPG
0901: NKNSHLSKQL VCLEACKKLH QMGALDDHLL PYVEEPSEND IIVKSKGSAA GAGTTKRKEL HGTTQTCALS GTWGDKIDGA IFQAYKIDFS CNIVNELYSG
1001: FVLLIESKLD DDVGNIEMEL YLISKFVRTS VSSCGQVSLD AEQVMKAMRF HELFFNSLFG RLFIGSKSSG VRREFLLNTQ QKSLWSSSNM YLLLPIESSN
1101: IPSDESWRIN WPGINSCASV VEFLEKRSQL STGNMNDDTG NPSPCSTGLV ETECKSISTV HLANNSVHVN NLKNMVVLAI HTGRIYSILD VVIDTSAESP
1201: FDGSADVNSS NYTTFAEYFN NKYGIVLMYP GQPLLLLKQS HNAHNLLVNF NDEGGEALQT GQKMLNEKAQ THVHMPPELL VSIEVPITVL KSSYLLPSLI
1301: HRLESLMLAS QLREEIAFTT GSQISSSLIL EAITTLRCSE SFSMERLELL GDSVLKYAVS CHLFLKYPKK HEGQLSARRS WVVCNSTLHK LGTDRSLQGY
1401: IRDGAFDPRR WVAPGQRSIR PVPCSCGVDA LEVPLDGKFQ TEDTKIVVGK SCDRGHRWMG SKTIADCVEA LIGAYYVGGG LNAALHLMKW FGIDVELEPS
1501: LVDEAIATAS LRTYIPKANE IEILESKIGY EFSVKGLLLE AITHATEQEL GVGYCYQRLE FLGDSVLDVL ITWHLYQSHR DIDPGELTDL RSASVNNESF
1601: AQVAVRRNLQ QHLQHCSGLL LGQIKEYAKY LSGSDDVPNP LQSTKGPKAL GDLVESIAGA ILIDTKLNLN EVWRIFKPLL SPIVTPDKLE LPPLRELNEL
1701: CDSLGYFIKE KCTNKGELVH AELRLQMIDV LLVGEGCGRN KKAAKGQAAA QLLKNLEKRG ISYSRSNSKR RKQGADLVGV SSSLNMGGDA CGQSNNEDSS
1801: ELIKFHKKQK TTGMQLCTRT SIANNCLENA CKPKLDTPVI KSINMKKGGP RSSLYELCKR LQWPMPSFES KEQRSRFPII FGEGSERREG FNSFISSISL
1901: HIPNCGVMEC RGDHRADKKS SLDSAALVML HELQRRGKLI IHD
0101: PALPSPNDLP IAVRKGTRST RNPHPIYNFL SYHRLSSPYS AFVYAISSVS FPKSTHEALS HPGWRQAMVD EMAALHSNGT WDLVVLPSGK STVGCRWVYA
0201: VKVGPDGQVD RLKARLVAKG YTQVYGSDYG DTFSPVAKIA SVRLLLSMAA MCSWPLYQLD IKNAFLHGDL AEEVYMEQPP GFVAQGESGL VCRLRRSLYG
0301: LKQSPRAWFS RFSSVVQEFG MLRSTADHSV FYHHNSLGQC IYLVVYVDDI VITGSDQDGI QKLKQHLFTH FQTKDLGKLK YFLGIEIAQS SSGVVLSQRK
0401: YALDILEETG MLDCKPVDTP MDPNVKLVPG QGEPLGDPGR YRRLVDADWA GSPTDRRSTS GYCVFIGGNL ISWKSKKQDV VARSSAEAEY RAMALATCEL
0501: IWLRHLLQEL RFGKDEQMKL ICDNQAALHI ASNPVFHERT KHIEVDCHFI REKIASGCVA TSFVNSNDQL ADIFTKSLRG PRIKYICNKL GAYDAVKVCI
0601: ENVSNAQEEF EFYRQSSSQC KCFLQEVLGI IGGYLPHGDG NYLNSESDIL KAVDKGYITP KLHELLQLFQ SFGVARKVLC LIFVERIITA KVIERFIKKI
0701: IYLSHFTVSY LTGSNSSVDA LAPKAQRETL ESFRSGKVNL LFATDVVEEG IHVPNCSCVI RFDLPKTVRS YVQSRGRARQ SDSQFIIMLE RGNTEQRDQL
0801: FDIIRSEYSM TDTATNRDPD GYTLKAYTIE EMDSYFVDST GASVTADSSV SLIHRYCEKL PGDKYFTPKP FFHFTYLEGM YECKLTLPPN AAFQTIIGPG
0901: NKNSHLSKQL VCLEACKKLH QMGALDDHLL PYVEEPSEND IIVKSKGSAA GAGTTKRKEL HGTTQTCALS GTWGDKIDGA IFQAYKIDFS CNIVNELYSG
1001: FVLLIESKLD DDVGNIEMEL YLISKFVRTS VSSCGQVSLD AEQVMKAMRF HELFFNSLFG RLFIGSKSSG VRREFLLNTQ QKSLWSSSNM YLLLPIESSN
1101: IPSDESWRIN WPGINSCASV VEFLEKRSQL STGNMNDDTG NPSPCSTGLV ETECKSISTV HLANNSVHVN NLKNMVVLAI HTGRIYSILD VVIDTSAESP
1201: FDGSADVNSS NYTTFAEYFN NKYGIVLMYP GQPLLLLKQS HNAHNLLVNF NDEGGEALQT GQKMLNEKAQ THVHMPPELL VSIEVPITVL KSSYLLPSLI
1301: HRLESLMLAS QLREEIAFTT GSQISSSLIL EAITTLRCSE SFSMERLELL GDSVLKYAVS CHLFLKYPKK HEGQLSARRS WVVCNSTLHK LGTDRSLQGY
1401: IRDGAFDPRR WVAPGQRSIR PVPCSCGVDA LEVPLDGKFQ TEDTKIVVGK SCDRGHRWMG SKTIADCVEA LIGAYYVGGG LNAALHLMKW FGIDVELEPS
1501: LVDEAIATAS LRTYIPKANE IEILESKIGY EFSVKGLLLE AITHATEQEL GVGYCYQRLE FLGDSVLDVL ITWHLYQSHR DIDPGELTDL RSASVNNESF
1601: AQVAVRRNLQ QHLQHCSGLL LGQIKEYAKY LSGSDDVPNP LQSTKGPKAL GDLVESIAGA ILIDTKLNLN EVWRIFKPLL SPIVTPDKLE LPPLRELNEL
1701: CDSLGYFIKE KCTNKGELVH AELRLQMIDV LLVGEGCGRN KKAAKGQAAA QLLKNLEKRG ISYSRSNSKR RKQGADLVGV SSSLNMGGDA CGQSNNEDSS
1801: ELIKFHKKQK TTGMQLCTRT SIANNCLENA CKPKLDTPVI KSINMKKGGP RSSLYELCKR LQWPMPSFES KEQRSRFPII FGEGSERREG FNSFISSISL
1901: HIPNCGVMEC RGDHRADKKS SLDSAALVML HELQRRGKLI IHD
0001: MHSSLEPEKM EEGGGSNSLK RKFSEIDGDQ NLDSVSSPMM TDSNGYELKV YEVAKNRNII AVLGTGIDKS EITKRLIKAM GSSDTDKRLI IFLAPTVNLV
0101: KQQCCEIRAL VNLKVEEYFG AKGVDKWTSQ RWDEEFSKHD VLVMTPQILL DVLRSAFLKL EMVCLLIIDE CHHTTGNHPY AKLMKEFYHE STSKPKIFGL
0201: TASAVIRKAQ VSELERLMDS KIFNPEEREG VEKFATTVKE GPILYNPSPS CSLELKEKLE TSHLKFDASL RRLQELGKDS FLNMDNKFET YQKRLSIDYR
0301: EILHCLDNLG LICAHLAAEV CLEKISDTKE ESETYKECSM VCKEFLEDIL STIGVYLPQD DKSLVDLQQN HLSAVISGHV SPKLKELFHL LDSFRGDKQK
0401: QCLILVERII TAKVIERFVK KEASLAYLNV LYLTENNPST NVSAQKMQIE IPDLFQHGKV NLLFITDVVE EGFQVPDCSC MVCFDLPKTM CSYSQSQKHA
0501: KQSNSKSIMF LERGNPKQRD HLHDLMRREV LIQDPEAPNL KSCPPPVKNG HGVKEIGSMV IPDSNITVSE EAASTQTMSD PPSRNEQLPP CKKLRLDNNL
0601: LQSNGKEKVA SSKSKSSSSA AGSKKRKELH GTTCANALSG TWGENIDGAT FQAYKFDFCC NISGEVYSSF SLLLESTLAE DVGKVEMDLY LVRKLVKASV
0701: SPCGQIRLSQ EELVKAKYFQ QFFFNGMFGK LFVGSKSQGT KREFLLQTDT SSLWHPAFMF LLLPVETNDL ASSATIDWSA INSCASIVEF LKKNSLLDLR
0801: DSDGNQCNTS SGQEVLLDDK MEETNLIHFA NASSDKNSLE ELVVIAIHTG RIYSIVEAVS DSSAMSPFEV DASSGYATYA EYFNKKYGIV LAHPNQPLMK
0901: LKQSHHAHNL LVDFNEEMVV KTEPKAGNVR KRKPNIHAHL PPELLARIDV PRAVLKSIYL LPSVMHRLES LMLASQLREE IDCSIDNFSI SSTSILEAVT
1001: TLTCPESFSM ERLELLGDSV LKYVASCHLF LKYPDKDEGQ LSRQRQSIIS NSNLHRLTTS RKLQGYIRNG AFEPRRWTAP GQFSLFPVPC KCGIDTREVP
1101: LDPKFFTENM TIKIGKSCDM GHRWVVSKSV SDCAEALIGA YYVSGGLSAS LHMMKWLGID VDFDPNLVVE AINRVSLRCY IPKEDELIEL ERKIQHEFSA
1201: KFLLKEAITH SSLRESYSYE RLEFLGDSVL DFLITRHLFN TYEQTGPGEM TDLRSACVNN ENFAQVAVKN NLHTHLQRCA TVLETQINDY LMSFQKPDET
1301: GRSIPSIQGP KALGDVVESI AGALLIDTRL DLDQVWRVFE PLLSPLVTPD KLQLPPYREL NELCDSLGYF FRVKCSNDGV KAQATIQLQL DDVLLTGDGS
1401: EQTNKLALGK AASHLLTQLE KRNISRKTSL GDNQSSMDVN LACNHSDRET LTSETTEIQS IVIPFIGPIN MKKGGPRGTL HEFCKKHLWP MPTFDTSEEK
1501: SRTPFEFIDG GEKRTSFSSF TSTITLRIPN REAVMYAGEA RPDKKSSFDS AVVELLYELE RRKIVIIQK
0101: KQQCCEIRAL VNLKVEEYFG AKGVDKWTSQ RWDEEFSKHD VLVMTPQILL DVLRSAFLKL EMVCLLIIDE CHHTTGNHPY AKLMKEFYHE STSKPKIFGL
0201: TASAVIRKAQ VSELERLMDS KIFNPEEREG VEKFATTVKE GPILYNPSPS CSLELKEKLE TSHLKFDASL RRLQELGKDS FLNMDNKFET YQKRLSIDYR
0301: EILHCLDNLG LICAHLAAEV CLEKISDTKE ESETYKECSM VCKEFLEDIL STIGVYLPQD DKSLVDLQQN HLSAVISGHV SPKLKELFHL LDSFRGDKQK
0401: QCLILVERII TAKVIERFVK KEASLAYLNV LYLTENNPST NVSAQKMQIE IPDLFQHGKV NLLFITDVVE EGFQVPDCSC MVCFDLPKTM CSYSQSQKHA
0501: KQSNSKSIMF LERGNPKQRD HLHDLMRREV LIQDPEAPNL KSCPPPVKNG HGVKEIGSMV IPDSNITVSE EAASTQTMSD PPSRNEQLPP CKKLRLDNNL
0601: LQSNGKEKVA SSKSKSSSSA AGSKKRKELH GTTCANALSG TWGENIDGAT FQAYKFDFCC NISGEVYSSF SLLLESTLAE DVGKVEMDLY LVRKLVKASV
0701: SPCGQIRLSQ EELVKAKYFQ QFFFNGMFGK LFVGSKSQGT KREFLLQTDT SSLWHPAFMF LLLPVETNDL ASSATIDWSA INSCASIVEF LKKNSLLDLR
0801: DSDGNQCNTS SGQEVLLDDK MEETNLIHFA NASSDKNSLE ELVVIAIHTG RIYSIVEAVS DSSAMSPFEV DASSGYATYA EYFNKKYGIV LAHPNQPLMK
0901: LKQSHHAHNL LVDFNEEMVV KTEPKAGNVR KRKPNIHAHL PPELLARIDV PRAVLKSIYL LPSVMHRLES LMLASQLREE IDCSIDNFSI SSTSILEAVT
1001: TLTCPESFSM ERLELLGDSV LKYVASCHLF LKYPDKDEGQ LSRQRQSIIS NSNLHRLTTS RKLQGYIRNG AFEPRRWTAP GQFSLFPVPC KCGIDTREVP
1101: LDPKFFTENM TIKIGKSCDM GHRWVVSKSV SDCAEALIGA YYVSGGLSAS LHMMKWLGID VDFDPNLVVE AINRVSLRCY IPKEDELIEL ERKIQHEFSA
1201: KFLLKEAITH SSLRESYSYE RLEFLGDSVL DFLITRHLFN TYEQTGPGEM TDLRSACVNN ENFAQVAVKN NLHTHLQRCA TVLETQINDY LMSFQKPDET
1301: GRSIPSIQGP KALGDVVESI AGALLIDTRL DLDQVWRVFE PLLSPLVTPD KLQLPPYREL NELCDSLGYF FRVKCSNDGV KAQATIQLQL DDVLLTGDGS
1401: EQTNKLALGK AASHLLTQLE KRNISRKTSL GDNQSSMDVN LACNHSDRET LTSETTEIQS IVIPFIGPIN MKKGGPRGTL HEFCKKHLWP MPTFDTSEEK
1501: SRTPFEFIDG GEKRTSFSSF TSTITLRIPN REAVMYAGEA RPDKKSSFDS AVVELLYELE RRKIVIIQK
Arabidopsis Description
DCL3Endoribonuclease Dicer homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXW7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.