Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d032655_P006 | Maize | nucleus | 89.62 | 93.44 |
| TraesCS1B01G177600.1 | Wheat | nucleus | 51.99 | 82.14 |
| TraesCS1D01G158000.2 | Wheat | nucleus | 80.57 | 81.02 |
| TraesCS1A01G160900.1 | Wheat | nucleus | 80.51 | 81.01 |
| Os10t0485600-01 | Rice | cytosol, plastid | 78.62 | 78.62 |
| HORVU1Hr1G042710.5 | Barley | cytosol, mitochondrion, nucleus | 80.45 | 78.25 |
| GSMUA_Achr5P10880_001 | Banana | cytosol | 51.8 | 53.07 |
| Solyc08g067210.2.1 | Tomato | nucleus | 40.13 | 45.94 |
| KRH61605 | Soybean | nucleus | 45.82 | 44.8 |
| KXG33962 | Sorghum | nucleus | 45.02 | 44.48 |
| KRH52276 | Soybean | cytosol | 12.58 | 40.95 |
| AT3G43920.2 | Thale cress | cytosol, nucleus, plastid | 38.61 | 40.0 |
| CDY30942 | Canola | nucleus | 30.73 | 39.89 |
| Bra019456.1-P | Field mustard | nucleus | 34.09 | 38.56 |
| CDY21223 | Canola | nucleus | 35.06 | 37.49 |
| VIT_04s0008g02170.t01 | Wine grape | mitochondrion | 43.86 | 36.95 |
| EES13704 | Sorghum | cytosol | 5.44 | 30.58 |
| OQU91441 | Sorghum | nucleus | 25.72 | 30.38 |
| OQU81938 | Sorghum | mitochondrion | 28.1 | 27.63 |
| KXG40313 | Sorghum | cytosol, nucleus, plastid | 31.22 | 26.49 |
| KXG38096 | Sorghum | plastid | 12.4 | 26.09 |
| KXG21693 | Sorghum | plastid | 6.41 | 23.76 |
Protein Annotations
| Gene3D:1.10.1520.10 | Gene3D:1.20.1320.30 | MapMan:12.5.1.8 | Gene3D:2.170.260.10 | Gene3D:3.30.160.20 | Gene3D:3.30.160.380 |
| Gene3D:3.40.50.300 | UniProt:A0A1Z5S6Q5 | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:Dicer_dimer_sf | InterPro:Dicer_dimerisation_dom | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004525 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016891 | GO:GO:0031047 | GO:GO:0090501 |
| GO:GO:0090502 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR000999 | InterPro:IPR001650 | InterPro:IPR003100 |
| InterPro:IPR005034 | InterPro:IPR014001 | InterPro:IPR036389 | InterPro:IPR038248 | EnsemblPlants:OQU91611 | ProteinID:OQU91611 |
| ProteinID:OQU91611.1 | InterPro:P-loop_NTPase | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF00270 | PFAM:PF00271 |
| PFAM:PF00636 | PFAM:PF02170 | PFAM:PF03368 | ScanProsite:PS00517 | PFscan:PS50142 | PFscan:PS50821 |
| PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51327 | PANTHER:PTHR14950 | PANTHER:PTHR14950:SF31 | InterPro:RNase_III_dom |
| InterPro:RNase_III_sf | SMART:SM00487 | SMART:SM00490 | SMART:SM00535 | SMART:SM00949 | EnsemblPlantsGene:SORBI_3001G214000 |
| SUPFAM:SSF101690 | SUPFAM:SSF52540 | SUPFAM:SSF54768 | SUPFAM:SSF69065 | UniParc:UPI000B8BA028 | SEG:seg |
Description
hypothetical protein
Coordinates
chr1:-:19729722..19741540
Molecular Weight (calculated)
184703.0 Da
IEP (calculated)
6.621
GRAVY (calculated)
-0.161
Length
1637 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAADPPPPPP PAQLPPPRRP HKQLQPRGYQ VEVFAAALRG NTIAVLDTGS GKTMVAIMLA REHVLRARAG ETPRRIVVFL APTVHLVHQQ FEVIREYTDL
0101: DAVECHGASG VGDWNAKRWK EAIGSKEIVV MTPQILLDAL RHAFLTMCVM SLLIFDECHR ACGNHPYSRI MKEFYIDSEW RPAIFGMTAS PVSKRGASTI
0201: EDCEAQIAQL ELVLNAKVYI VEDRNELESF STGAKIVNKY YDPYLFDLDD LESKLQMLFE EFDGLLVSLQ ESSPNKFEDT DSILEMSRKS LSRYHGKILY
0301: GLNTLGPIVT LEVVKIYNES INTVGDSEDC LFSKASLNLQ VSYFKEALFL IEEFLPQGYG ELMKSESGSA ELTKRGYVSS KVQTLINIFK SFGSSEEVLC
0401: MIFVERIMTA KAVERFMRGN VNFSRFSISY LTGGSTSKDS LSPAVQRFTL DLFRAGKVNL LFTTDVTEEG IDVPNCSCVI RFDLPRTVCS YVQSRGRARR
0501: SSSSYVLMIE RGNLVQQEHI FRIIRTEYYV KTFALHKQPN TPSLDLPLQE KYMYHVESTG ATITAECCVN LIYKYCEKLP KDRYYLPKPC FEVGLKDGSY
0601: QCALTMPPNA AFRSIVGPPS STCNLAKQLV CLEACKKLHE LGELDDHLVP LTEEPMDIDT DTTDKKCVSG PGTTKRKELH GIINVHGLSG NWIHESETVI
0701: LNSYTFDFRC DQEGETFAGF VLLMESVLDD DVAHSEIDLF LIPNKMVYTA ITPCGKIQLN KEQLRKGKLF QEFFFNGIFG RLFHGSRTSG LQREFIFRKG
0801: HEIQWGSDNM YLLLPLRNSS HIQHDLNIYW EAVESCSGAV EQLRNLYLED GNLNHENLCS HKRSNKGEDI IHLANKSLHF STVKDSVVLS LHTGRIYSVL
0901: DLILDTTADD SFDEMYNGKA SPFSSFVDYY HQKYGIVIQH PGQPLLLLKQ SHNAHNLLFS KMKYQDGSTG NPLLVEKEQI HARVPPELLI HIDVTTDILK
1001: SFYLLPSVMH RVQSLMLASQ LRRDISYTQR IPSSLILEAI TTLRCCETFS LERLELLGDS VLKYVIGCDL FLRYPMKHEG HLSDMRSKAV CNATLHKHGI
1101: CRSLQGYIRD TAFDPRRWVA PGQISLRPFP CNCGIETAFV PFTGEYISDD PSFIVGKPCD RGHRWMCSKT VSDCVEALVG AYYVGGGITA AIWVMRWFGI
1201: DVRCDMELVQ KAKYNSNASQ LCYLSKLKVF EELEAKLKYN FSVKGLLLEA VSHPSLQELG VDYCYQRLEF LGDSVLDLLI TQHLYATHTD VDPGELTDLR
1301: SALVSNENFA QAVVRNNIHS HLQHGSGILL EQVTEYVRSS LEYHGKENEF VQQATFKAPK VLGDIMESIT GAIFIDVNFN VDLVWKIVEP LLSPMITPDK
1401: LALPPYRELL ELCSHLGCFI KSKCTSKGEE LIIEMTVQLR DELLIAQGHD RNRKSAKAKA AARILVDLKK RGLSLKQCFS KAKQLDIVSS ELQSELISLE
1501: SRYDCPDVNG SLSLEGLSSV RAAVVLPLKM DKGGPRTALF RLCKRLQWPI PEFEFVEQRF RTPIVLDGVT TTNFNSFVST ITLHIPDVTV ITLQGERRTD
1601: KKSSQDSASL VMLQKLEELK VCICKQTQQS NMDNNTS
0101: DAVECHGASG VGDWNAKRWK EAIGSKEIVV MTPQILLDAL RHAFLTMCVM SLLIFDECHR ACGNHPYSRI MKEFYIDSEW RPAIFGMTAS PVSKRGASTI
0201: EDCEAQIAQL ELVLNAKVYI VEDRNELESF STGAKIVNKY YDPYLFDLDD LESKLQMLFE EFDGLLVSLQ ESSPNKFEDT DSILEMSRKS LSRYHGKILY
0301: GLNTLGPIVT LEVVKIYNES INTVGDSEDC LFSKASLNLQ VSYFKEALFL IEEFLPQGYG ELMKSESGSA ELTKRGYVSS KVQTLINIFK SFGSSEEVLC
0401: MIFVERIMTA KAVERFMRGN VNFSRFSISY LTGGSTSKDS LSPAVQRFTL DLFRAGKVNL LFTTDVTEEG IDVPNCSCVI RFDLPRTVCS YVQSRGRARR
0501: SSSSYVLMIE RGNLVQQEHI FRIIRTEYYV KTFALHKQPN TPSLDLPLQE KYMYHVESTG ATITAECCVN LIYKYCEKLP KDRYYLPKPC FEVGLKDGSY
0601: QCALTMPPNA AFRSIVGPPS STCNLAKQLV CLEACKKLHE LGELDDHLVP LTEEPMDIDT DTTDKKCVSG PGTTKRKELH GIINVHGLSG NWIHESETVI
0701: LNSYTFDFRC DQEGETFAGF VLLMESVLDD DVAHSEIDLF LIPNKMVYTA ITPCGKIQLN KEQLRKGKLF QEFFFNGIFG RLFHGSRTSG LQREFIFRKG
0801: HEIQWGSDNM YLLLPLRNSS HIQHDLNIYW EAVESCSGAV EQLRNLYLED GNLNHENLCS HKRSNKGEDI IHLANKSLHF STVKDSVVLS LHTGRIYSVL
0901: DLILDTTADD SFDEMYNGKA SPFSSFVDYY HQKYGIVIQH PGQPLLLLKQ SHNAHNLLFS KMKYQDGSTG NPLLVEKEQI HARVPPELLI HIDVTTDILK
1001: SFYLLPSVMH RVQSLMLASQ LRRDISYTQR IPSSLILEAI TTLRCCETFS LERLELLGDS VLKYVIGCDL FLRYPMKHEG HLSDMRSKAV CNATLHKHGI
1101: CRSLQGYIRD TAFDPRRWVA PGQISLRPFP CNCGIETAFV PFTGEYISDD PSFIVGKPCD RGHRWMCSKT VSDCVEALVG AYYVGGGITA AIWVMRWFGI
1201: DVRCDMELVQ KAKYNSNASQ LCYLSKLKVF EELEAKLKYN FSVKGLLLEA VSHPSLQELG VDYCYQRLEF LGDSVLDLLI TQHLYATHTD VDPGELTDLR
1301: SALVSNENFA QAVVRNNIHS HLQHGSGILL EQVTEYVRSS LEYHGKENEF VQQATFKAPK VLGDIMESIT GAIFIDVNFN VDLVWKIVEP LLSPMITPDK
1401: LALPPYRELL ELCSHLGCFI KSKCTSKGEE LIIEMTVQLR DELLIAQGHD RNRKSAKAKA AARILVDLKK RGLSLKQCFS KAKQLDIVSS ELQSELISLE
1501: SRYDCPDVNG SLSLEGLSSV RAAVVLPLKM DKGGPRTALF RLCKRLQWPI PEFEFVEQRF RTPIVLDGVT TTNFNSFVST ITLHIPDVTV ITLQGERRTD
1601: KKSSQDSASL VMLQKLEELK VCICKQTQQS NMDNNTS
0001: MHSSLEPEKM EEGGGSNSLK RKFSEIDGDQ NLDSVSSPMM TDSNGSYELK VYEVAKNRNI IAVLGTGIDK SEITKRLIKA MGSSDTDKRL IIFLAPTVNL
0101: VKQQCCEIRA LVNLKVEEYF GAKGVDKWTS QRWDEEFSKH DVLVMTPQIL LDVLRSAFLK LEMVCLLIID ECHHTTGNHP YAKLMKEFYH ESTSKPKIFG
0201: LTASAVIRKG IVSSPSNYAA QVSELERLMD SKIFNPEERE GVEKFATTVK EGPILYNPSP SCSLELKEKL ETSHLKFDAS LRRLQELGKD SFLNMDNKFE
0301: TYQKRLSIDY REILHCLDNL GLICAHLAAE VCLEKISDTK EESETYKECS MVCKEFLEDI LSTIGVYLPQ DDKSLVDLQQ NHLSAVISGH VSPKLKELFH
0401: LLDSFRGDKQ KQCLILVERI ITAKVIERFV KKEASLAYLN VLYLTENNPS TNVSAQKMQI EIPDLFQHGK VNLLFITDVV EEGFQVPDCS CMVCFDLPKT
0501: MCSYSQSQKH AKQSNSKSIM FLERGNPKQR DHLHDLMRRE VLIQDPEAPN LKSCPPPVKN GHGVKEIGSM VIPDSNITVS EEAASTQTMS DPPSRNEQLP
0601: PCKKLRLDNN LLQSNGKEKV ASSKSKSSSS AAGSKKRKEL HGTTCANALS GTWGENIDGA TFQAYKFDFC CNISGEVYSS FSLLLESTLA EDVGKVEMDL
0701: YLVRKLVKAS VSPCGQIRLS QEELVKAKYF QQFFFNGMFG KLFVGSKSQG TKREFLLQTD TSSLWHPAFM FLLLPVETND LASSATIDWS AINSCASIVE
0801: FLKKNSLLDL RDSDGNQCNT SSGQEVLLDD KMEETNLIHF ANASSDKNSL EELVVIAIHT GRIYSIVEAV SDSSAMSPFE VDASSGYATY AEYFNKKYGI
0901: VLAHPNQPLM KLKQSHHAHN LLVDFNEEMV VKTEPKAGNV RKRKPNIHAH LPPELLARID VPRAVLKSIY LLPSVMHRLE SLMLASQLRE EIDCSIDNFS
1001: ISSTSILEAV TTLTCPESFS MERLELLGDS VLKYVASCHL FLKYPDKDEG QLSRQRQSII SNSNLHRLTT SRKLQGYIRN GAFEPRRWTA PGQFSLFPVP
1101: CKCGIDTREV PLDPKFFTEN MTIKIGKSCD MGHRWVVSKS VSDCAEALIG AYYVSGGLSA SLHMMKWLGI DVDFDPNLVV EAINRVSLRC YIPKEDELIE
1201: LERKIQHEFS AKFLLKEAIT HSSLRESYSY ERLEFLGDSV LDFLITRHLF NTYEQTGPGE MTDLRSACVN NENFAQVAVK NNLHTHLQRC ATVLETQIND
1301: YLMSFQKPDE TGRSIPSIQG PKALGDVVES IAGALLIDTR LDLDQVWRVF EPLLSPLVTP DKLQLPPYRE LNELCDSLGY FFRVKCSNDG VKAQATIQLQ
1401: LDDVLLTGDG SEQTNKLALG KAASHLLTQL EKRNISRKTS LGDNQSSMDV NLACNHSDRE TLTSETTEIQ SIVIPFIGPI NMKKGGPRGT LHEFCKKHLW
1501: PMPTFDTSEE KSRTPFEFID GGEKRTSFSS FTSTITLRIP NREAVMYAGE ARPDKKSSFD SAVVELLYEL ERRKIVIIQK
0101: VKQQCCEIRA LVNLKVEEYF GAKGVDKWTS QRWDEEFSKH DVLVMTPQIL LDVLRSAFLK LEMVCLLIID ECHHTTGNHP YAKLMKEFYH ESTSKPKIFG
0201: LTASAVIRKG IVSSPSNYAA QVSELERLMD SKIFNPEERE GVEKFATTVK EGPILYNPSP SCSLELKEKL ETSHLKFDAS LRRLQELGKD SFLNMDNKFE
0301: TYQKRLSIDY REILHCLDNL GLICAHLAAE VCLEKISDTK EESETYKECS MVCKEFLEDI LSTIGVYLPQ DDKSLVDLQQ NHLSAVISGH VSPKLKELFH
0401: LLDSFRGDKQ KQCLILVERI ITAKVIERFV KKEASLAYLN VLYLTENNPS TNVSAQKMQI EIPDLFQHGK VNLLFITDVV EEGFQVPDCS CMVCFDLPKT
0501: MCSYSQSQKH AKQSNSKSIM FLERGNPKQR DHLHDLMRRE VLIQDPEAPN LKSCPPPVKN GHGVKEIGSM VIPDSNITVS EEAASTQTMS DPPSRNEQLP
0601: PCKKLRLDNN LLQSNGKEKV ASSKSKSSSS AAGSKKRKEL HGTTCANALS GTWGENIDGA TFQAYKFDFC CNISGEVYSS FSLLLESTLA EDVGKVEMDL
0701: YLVRKLVKAS VSPCGQIRLS QEELVKAKYF QQFFFNGMFG KLFVGSKSQG TKREFLLQTD TSSLWHPAFM FLLLPVETND LASSATIDWS AINSCASIVE
0801: FLKKNSLLDL RDSDGNQCNT SSGQEVLLDD KMEETNLIHF ANASSDKNSL EELVVIAIHT GRIYSIVEAV SDSSAMSPFE VDASSGYATY AEYFNKKYGI
0901: VLAHPNQPLM KLKQSHHAHN LLVDFNEEMV VKTEPKAGNV RKRKPNIHAH LPPELLARID VPRAVLKSIY LLPSVMHRLE SLMLASQLRE EIDCSIDNFS
1001: ISSTSILEAV TTLTCPESFS MERLELLGDS VLKYVASCHL FLKYPDKDEG QLSRQRQSII SNSNLHRLTT SRKLQGYIRN GAFEPRRWTA PGQFSLFPVP
1101: CKCGIDTREV PLDPKFFTEN MTIKIGKSCD MGHRWVVSKS VSDCAEALIG AYYVSGGLSA SLHMMKWLGI DVDFDPNLVV EAINRVSLRC YIPKEDELIE
1201: LERKIQHEFS AKFLLKEAIT HSSLRESYSY ERLEFLGDSV LDFLITRHLF NTYEQTGPGE MTDLRSACVN NENFAQVAVK NNLHTHLQRC ATVLETQIND
1301: YLMSFQKPDE TGRSIPSIQG PKALGDVVES IAGALLIDTR LDLDQVWRVF EPLLSPLVTP DKLQLPPYRE LNELCDSLGY FFRVKCSNDG VKAQATIQLQ
1401: LDDVLLTGDG SEQTNKLALG KAASHLLTQL EKRNISRKTS LGDNQSSMDV NLACNHSDRE TLTSETTEIQ SIVIPFIGPI NMKKGGPRGT LHEFCKKHLW
1501: PMPTFDTSEE KSRTPFEFID GGEKRTSFSS FTSTITLRIP NREAVMYAGE ARPDKKSSFD SAVVELLYEL ERRKIVIIQK
Arabidopsis Description
DCL3Endoribonuclease Dicer homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXW7]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.