Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU91611 | Sorghum | nucleus, plastid | 93.44 | 89.62 |
| TraesCS1D01G158000.2 | Wheat | nucleus | 78.34 | 75.55 |
| TraesCS1A01G160900.1 | Wheat | nucleus | 78.28 | 75.54 |
| TraesCS1B01G177600.1 | Wheat | nucleus | 49.43 | 74.9 |
| Os10t0485600-01 | Rice | cytosol, plastid | 77.77 | 74.59 |
| HORVU1Hr1G042710.5 | Barley | cytosol, mitochondrion, nucleus | 78.66 | 73.38 |
| GSMUA_Achr5P10880_001 | Banana | cytosol | 51.66 | 50.75 |
| Solyc08g067210.2.1 | Tomato | nucleus | 40.25 | 44.2 |
| KRH61605 | Soybean | nucleus | 46.37 | 43.49 |
| Zm00001d042432_P007 | Maize | cytosol | 45.03 | 42.39 |
| AT3G43920.2 | Thale cress | cytosol, nucleus, plastid | 38.6 | 38.35 |
| CDY30942 | Canola | nucleus | 30.25 | 37.67 |
| KRH52276 | Soybean | cytosol | 11.91 | 37.18 |
| Bra019456.1-P | Field mustard | nucleus | 33.82 | 36.7 |
| CDY21223 | Canola | nucleus | 34.97 | 35.86 |
| VIT_04s0008g02170.t01 | Wine grape | mitochondrion | 43.95 | 35.51 |
| Zm00001d013796_P005 | Maize | cytosol, endoplasmic reticulum, nucleus | 26.56 | 28.46 |
| Zm00001d025830_P011 | Maize | cytosol, nucleus, plasma membrane | 28.79 | 28.09 |
| Zm00001d013797_P006 | Maize | nucleus | 12.8 | 27.35 |
| Zm00001d027412_P004 | Maize | cytosol, nucleus, plastid | 31.46 | 25.58 |
| Zm00001d009879_P002 | Maize | plastid | 6.05 | 25.27 |
| Zm00001d032362_P002 | Maize | mitochondrion | 5.29 | 25.23 |
Protein Annotations
| Gene3D:1.10.1520.10 | Gene3D:1.20.1320.30 | MapMan:12.5.1.8 | Gene3D:2.170.260.10 | Gene3D:3.30.160.380 | Gene3D:3.40.50.300 |
| UniProt:A0A1D6KSK2 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:Dicer_dimer_sf | InterPro:Dicer_dimerisation_dom | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004525 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016891 | GO:GO:0031047 | GO:GO:0090501 |
| GO:GO:0090502 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR000999 | InterPro:IPR001650 | InterPro:IPR003100 |
| InterPro:IPR005034 | InterPro:IPR014001 | InterPro:IPR036389 | InterPro:IPR038248 | ProteinID:ONM05645.1 | InterPro:P-loop_NTPase |
| InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF00636 | PFAM:PF02170 |
| PFAM:PF03368 | ScanProsite:PS00517 | PFscan:PS50142 | PFscan:PS50821 | PFscan:PS51192 | PFscan:PS51194 |
| PFscan:PS51327 | PANTHER:PTHR14950 | PANTHER:PTHR14950:SF31 | InterPro:RNase_III_dom | InterPro:RNase_III_sf | SMART:SM00487 |
| SMART:SM00490 | SMART:SM00535 | SMART:SM00949 | SUPFAM:SSF101690 | SUPFAM:SSF52540 | SUPFAM:SSF54768 |
| SUPFAM:SSF69065 | UniParc:UPI0008444E9D | EnsemblPlantsGene:Zm00001d032655 | EnsemblPlants:Zm00001d032655_P006 | EnsemblPlants:Zm00001d032655_T006 | SEG:seg |
Description
dicer-like 102
Coordinates
chr1:-:233262795..233282063
Molecular Weight (calculated)
177150.0 Da
IEP (calculated)
6.411
GRAVY (calculated)
-0.180
Length
1570 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADAATSEDA DLPPPPPPAQ LPPPRRPHKR LQPRGYQVEV FAAALRGNTI AVLDTGSGKT MVAIMLAREH VLRARAGEAL RRIVVFLAPT VHLVHQQFEV
0101: IREYTDLDAV ECHGASGVGH WNAKRWKEAI GTKEIVVMTP QILLDALRHA FLTMRVMSLL IFDECHRACG NHPYSLIMKE FYIDSEWRPA IFGMTASPVS
0201: KKGASTIEDC EAQIAQLELV LDAKVYIVED RNELESFSTG AKVVNKYYDP YLFDLDNLES KLQMLFEEFD GLLVRLQESS PNKFEDTDSI LEMSRKSLSR
0301: CHGKILYELN TLGPIVTLEV VKIYNESINT IDDSEDCVFS KESLNLQVSY FKEALFLIED FLPQGYGELM KSESGSAELT KKGYISSKVE SLINIFKSFG
0401: SSEEVLCMIF VERITTAKAV ERFMRGNVNF SRFSISYLTG GSTSKDALSP AVQRFTLDLF RAGKVNLLFT TDVTEEGIDV PNCSCVIRFD LPRTVCSYVQ
0501: SRGRARKSSS SYVLMIERGN LAQQEHIFRI IRTEYYVKTF ALHKQPNTPS LDLPLQEKYI YHVESTGATI TAECCVNLIY KYCEKLPKDR YYLPKPCFEV
0601: GLKDGSYQCT LTMPHNAAFR SIVGPPSSSC NLAKQLVCLE ACKKLHELGE LDDHLVPLTE EPMDIDTDTT DKKCVSGPGT TKRKELHGTI NVHGLSGNWI
0701: HESETVILNA YTFDFRCDQE GELYAGFVLL MESVLDDDVA RSEIDLFLIP NKMVYTTMTP CGKIQLNKEQ LCKGKLFQEF FFNGIFGRLF HGSRTDELQR
0801: EFIFTKGHEI QWGSDNMYLL LPLRNSSQIQ HDPNIYWEAV ESCSGTVEQL RNLYLEDGNL NHENLCSHKR SNKGEDIIHL ANKSLHFSTV KDSVVLSLHT
0901: GRIYSVLDLI LDKTADDSFD EMYNGKASPF ASFVDYYHQK YGIVIQHPGQ PLLLLKQSHN AHNLLFSKMK YQDGSTGNPL LVEKEQIHAR VPPELLIHID
1001: VATDILKSFY LLPSVMHRVQ SLMLASQLRS NISYIQRIPS SLILEAITTL RCCESFSLER LELLGDSVLK YVIGCDLFLR YPMKHEGHLS DMRSKAVCNA
1101: TLHKHGIWQS LQGYIRDAAF DPRRWVAPGQ ISLRPFPCNC GIETAFVPFN GGYISDDPSF VVGKPCDRGH RWMCSKTVSD CVEALVGAYY VGGGIAAAIW
1201: VMRWFGIDVR CDMELVQKAK YNSNASRMCY LSKIKDIEEL EAKLKYNFSV KGLLLEAISH PSVQELGVDY CYQRLEFLGD SVLDLLITQH LYATHTDVDP
1301: GELTDLRSAS VSNENFAQAV VRNNIHNHLQ HGSGILLEQV TEYVRSNLEY HGKENQFLQQ ATCKAPKVLG DIMESITGAI FIDVNFDVDL VWKIVEPLLS
1401: PMITPDKLAL PPYRELLELC SHLGCFIESK CTSEGEELII EMKVQLRDEQ LIAQGHDRNG KTAKANAAAR ILVDMKKRGL SLKQCISKAN QLDIVSSKLQ
1501: SELTNLESRH DCPHMNGTLS LGLSSARAAV VLPLKMDKGG PRTALFRLCK SLQWPIPEFE FVEQRFRYAK
0101: IREYTDLDAV ECHGASGVGH WNAKRWKEAI GTKEIVVMTP QILLDALRHA FLTMRVMSLL IFDECHRACG NHPYSLIMKE FYIDSEWRPA IFGMTASPVS
0201: KKGASTIEDC EAQIAQLELV LDAKVYIVED RNELESFSTG AKVVNKYYDP YLFDLDNLES KLQMLFEEFD GLLVRLQESS PNKFEDTDSI LEMSRKSLSR
0301: CHGKILYELN TLGPIVTLEV VKIYNESINT IDDSEDCVFS KESLNLQVSY FKEALFLIED FLPQGYGELM KSESGSAELT KKGYISSKVE SLINIFKSFG
0401: SSEEVLCMIF VERITTAKAV ERFMRGNVNF SRFSISYLTG GSTSKDALSP AVQRFTLDLF RAGKVNLLFT TDVTEEGIDV PNCSCVIRFD LPRTVCSYVQ
0501: SRGRARKSSS SYVLMIERGN LAQQEHIFRI IRTEYYVKTF ALHKQPNTPS LDLPLQEKYI YHVESTGATI TAECCVNLIY KYCEKLPKDR YYLPKPCFEV
0601: GLKDGSYQCT LTMPHNAAFR SIVGPPSSSC NLAKQLVCLE ACKKLHELGE LDDHLVPLTE EPMDIDTDTT DKKCVSGPGT TKRKELHGTI NVHGLSGNWI
0701: HESETVILNA YTFDFRCDQE GELYAGFVLL MESVLDDDVA RSEIDLFLIP NKMVYTTMTP CGKIQLNKEQ LCKGKLFQEF FFNGIFGRLF HGSRTDELQR
0801: EFIFTKGHEI QWGSDNMYLL LPLRNSSQIQ HDPNIYWEAV ESCSGTVEQL RNLYLEDGNL NHENLCSHKR SNKGEDIIHL ANKSLHFSTV KDSVVLSLHT
0901: GRIYSVLDLI LDKTADDSFD EMYNGKASPF ASFVDYYHQK YGIVIQHPGQ PLLLLKQSHN AHNLLFSKMK YQDGSTGNPL LVEKEQIHAR VPPELLIHID
1001: VATDILKSFY LLPSVMHRVQ SLMLASQLRS NISYIQRIPS SLILEAITTL RCCESFSLER LELLGDSVLK YVIGCDLFLR YPMKHEGHLS DMRSKAVCNA
1101: TLHKHGIWQS LQGYIRDAAF DPRRWVAPGQ ISLRPFPCNC GIETAFVPFN GGYISDDPSF VVGKPCDRGH RWMCSKTVSD CVEALVGAYY VGGGIAAAIW
1201: VMRWFGIDVR CDMELVQKAK YNSNASRMCY LSKIKDIEEL EAKLKYNFSV KGLLLEAISH PSVQELGVDY CYQRLEFLGD SVLDLLITQH LYATHTDVDP
1301: GELTDLRSAS VSNENFAQAV VRNNIHNHLQ HGSGILLEQV TEYVRSNLEY HGKENQFLQQ ATCKAPKVLG DIMESITGAI FIDVNFDVDL VWKIVEPLLS
1401: PMITPDKLAL PPYRELLELC SHLGCFIESK CTSEGEELII EMKVQLRDEQ LIAQGHDRNG KTAKANAAAR ILVDMKKRGL SLKQCISKAN QLDIVSSKLQ
1501: SELTNLESRH DCPHMNGTLS LGLSSARAAV VLPLKMDKGG PRTALFRLCK SLQWPIPEFE FVEQRFRYAK
0001: MHSSLEPEKM EEGGGSNSLK RKFSEIDGDQ NLDSVSSPMM TDSNGSYELK VYEVAKNRNI IAVLGTGIDK SEITKRLIKA MGSSDTDKRL IIFLAPTVNL
0101: QCCEIRALVN LKVEEYFGAK GVDKWTSQRW DEEFSKHDVL VMTPQILLDV LRSAFLKLEM VCLLIIDECH HTTGNHPYAK LMKIFNPEER EGVEKFATTV
0201: KEGPILYNPS PSCSLELKEK LETSHLKFDA SLRRLQELGK DSFLNMDNKF ETYQKRLSID YREILHCLDN LGLICAHLAA EVCLEKISDT KEESETYKEC
0301: SMVCKEFLED ILSTIGVYLP QDDKSLVDLQ QNHLSAVISG HVSPKLKELF HLLDSFRGDK QKQCLILVER IITAKVIERF VKKEASLAYL NVLYLTENNP
0401: STNVSAQKMQ IEIPDLFQHG KVNLLFITDV VEEGFQVPDC SCMVCFDLPK TMCSYSQSQK HAKQSNSKSI MFLERGNPKQ RDHLHDLMRR EVLIQDPEAP
0501: NLKSCPPPVK NGHGVKEIGS MVIPDSNITV SEEAASTQTM SDPPSRNEQL PPCKKLRLDN NLLQSNGKEK VASSKSKSSS SAAGSKKRKE LHGTTCANAL
0601: SGTWGENIDG ATFQAYKFDF CCNISGEVYS SFSLLLESTL AEDVGKVEMD LYLVRKLVKA SVSPCGQIRL SQEELVKAKY FQQFFFNGMF GKLFVGSKSQ
0701: GTKREFLLQT DTSSLWHPAF MFLLLPVETN DLASSATIDW SAINSCASIV EFLKKNSLLD LRDSDGNQCN TSSGQEVLLD DKMEETNLIH FANASSDKNS
0801: LEELVVIAIH TGRIYSIVEA VSDSSAMSPF EVDASSGYAT YAEYFNKKYG IVLAHPNQPL MKLKQSHHAH NLLVDFNEEM VVKTEPKAGN VRKRKPNIHA
0901: HLPPELLARI DVPRAVLKSI YLLPSVMHRL ESLMLASQLR EEIDCSIDNF SISSTSILEA VTTLTCPESF SMERLELLGD SVLKYVASCH LFLKYPDKDE
1001: GQLSRQRQSI ISNSNLHRLT TSRKLQGYIR NGAFEPRRWT APGQFSLFPV PCKCGIDTRE VPLDPKFFTE NMTIKIGKSC DMGHRWVVSK SVSDCAEALI
1101: GAYYVSGGLS ASLHMMKWLG IDVDFDPNLV VEAINRVSLR CYIPKEDELI ELERKIQHEF SAKFLLKEAI THSSLRESYS YERLEFLGDS VLDFLITRHL
1201: FNTYEQTGPG EMTDLRSACV NNENFAQVAV KNNLHTHLQR CATVLETQIN DYLMSFQKPD ETGRSIPSIQ GPKALGDVVE SIAGALLIDT RLDLDQVWRV
1301: FEPLLSPLVT PDKLQLPPYR ELNELCDSLG YFFRVKCSND GVKAQATIQL QLDDVLLTGD GSEQTNKLAL GKAASHLLTQ LEKRNISRKT SLGDNQSSMD
1401: VNLACNHSDR ETLTSETTEI QSIVIPFIGP INMKKGGPRG TLHEFCKKHL WPMPTFDTSE EKSRTPFEFI DGGEKRTSFS SFTSTITLRI PNREAVMYAG
1501: EARPDKKSSF DSAVVELLYE LERRKIVIIQ K
0101: QCCEIRALVN LKVEEYFGAK GVDKWTSQRW DEEFSKHDVL VMTPQILLDV LRSAFLKLEM VCLLIIDECH HTTGNHPYAK LMKIFNPEER EGVEKFATTV
0201: KEGPILYNPS PSCSLELKEK LETSHLKFDA SLRRLQELGK DSFLNMDNKF ETYQKRLSID YREILHCLDN LGLICAHLAA EVCLEKISDT KEESETYKEC
0301: SMVCKEFLED ILSTIGVYLP QDDKSLVDLQ QNHLSAVISG HVSPKLKELF HLLDSFRGDK QKQCLILVER IITAKVIERF VKKEASLAYL NVLYLTENNP
0401: STNVSAQKMQ IEIPDLFQHG KVNLLFITDV VEEGFQVPDC SCMVCFDLPK TMCSYSQSQK HAKQSNSKSI MFLERGNPKQ RDHLHDLMRR EVLIQDPEAP
0501: NLKSCPPPVK NGHGVKEIGS MVIPDSNITV SEEAASTQTM SDPPSRNEQL PPCKKLRLDN NLLQSNGKEK VASSKSKSSS SAAGSKKRKE LHGTTCANAL
0601: SGTWGENIDG ATFQAYKFDF CCNISGEVYS SFSLLLESTL AEDVGKVEMD LYLVRKLVKA SVSPCGQIRL SQEELVKAKY FQQFFFNGMF GKLFVGSKSQ
0701: GTKREFLLQT DTSSLWHPAF MFLLLPVETN DLASSATIDW SAINSCASIV EFLKKNSLLD LRDSDGNQCN TSSGQEVLLD DKMEETNLIH FANASSDKNS
0801: LEELVVIAIH TGRIYSIVEA VSDSSAMSPF EVDASSGYAT YAEYFNKKYG IVLAHPNQPL MKLKQSHHAH NLLVDFNEEM VVKTEPKAGN VRKRKPNIHA
0901: HLPPELLARI DVPRAVLKSI YLLPSVMHRL ESLMLASQLR EEIDCSIDNF SISSTSILEA VTTLTCPESF SMERLELLGD SVLKYVASCH LFLKYPDKDE
1001: GQLSRQRQSI ISNSNLHRLT TSRKLQGYIR NGAFEPRRWT APGQFSLFPV PCKCGIDTRE VPLDPKFFTE NMTIKIGKSC DMGHRWVVSK SVSDCAEALI
1101: GAYYVSGGLS ASLHMMKWLG IDVDFDPNLV VEAINRVSLR CYIPKEDELI ELERKIQHEF SAKFLLKEAI THSSLRESYS YERLEFLGDS VLDFLITRHL
1201: FNTYEQTGPG EMTDLRSACV NNENFAQVAV KNNLHTHLQR CATVLETQIN DYLMSFQKPD ETGRSIPSIQ GPKALGDVVE SIAGALLIDT RLDLDQVWRV
1301: FEPLLSPLVT PDKLQLPPYR ELNELCDSLG YFFRVKCSND GVKAQATIQL QLDDVLLTGD GSEQTNKLAL GKAASHLLTQ LEKRNISRKT SLGDNQSSMD
1401: VNLACNHSDR ETLTSETTEI QSIVIPFIGP INMKKGGPRG TLHEFCKKHL WPMPTFDTSE EKSRTPFEFI DGGEKRTSFS SFTSTITLRI PNREAVMYAG
1501: EARPDKKSSF DSAVVELLYE LERRKIVIIQ K
Arabidopsis Description
DCL3Endoribonuclease Dicer homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXW7]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.