Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG33962 | Sorghum | nucleus | 91.91 | 92.52 |
| Os01t0909200-01 | Rice | cytosol | 71.46 | 72.2 |
| TraesCS3D01G411200.6 | Wheat | nucleus | 65.95 | 67.32 |
| TraesCS3A01G415400.2 | Wheat | nucleus | 67.57 | 67.16 |
| TraesCS3B01G450600.3 | Wheat | nucleus | 67.27 | 66.91 |
| HORVU3Hr1G092430.9 | Barley | cytosol, nucleus, plastid | 66.43 | 65.76 |
| GSMUA_Achr10P... | Banana | nucleus | 22.24 | 55.96 |
| KRH61605 | Soybean | nucleus | 47.54 | 47.37 |
| GSMUA_Achr10P... | Banana | cytosol | 11.87 | 46.81 |
| Solyc08g067210.2.1 | Tomato | nucleus | 40.05 | 46.71 |
| Zm00001d032655_P006 | Maize | nucleus | 42.39 | 45.03 |
| KRH52276 | Soybean | cytosol | 13.37 | 44.33 |
| AT3G43920.2 | Thale cress | cytosol, nucleus, plastid | 41.07 | 43.35 |
| CDY30942 | Canola | nucleus | 32.61 | 43.14 |
| Bra019456.1-P | Field mustard | nucleus | 36.27 | 41.81 |
| CDY21223 | Canola | nucleus | 37.89 | 41.28 |
| VIT_04s0008g02170.t01 | Wine grape | mitochondrion | 45.14 | 38.75 |
| Zm00001d025830_P011 | Maize | cytosol, nucleus, plasma membrane | 28.72 | 29.77 |
| Zm00001d013796_P005 | Maize | cytosol, endoplasmic reticulum, nucleus | 25.84 | 29.42 |
| Zm00001d032362_P002 | Maize | mitochondrion | 5.7 | 28.88 |
| Zm00001d009879_P002 | Maize | plastid | 6.41 | 28.46 |
| Zm00001d013797_P006 | Maize | nucleus | 11.87 | 26.94 |
| Zm00001d027412_P004 | Maize | cytosol, nucleus, plastid | 30.34 | 26.2 |
Protein Annotations
| Gene3D:1.10.1520.10 | EntrezGene:100279204 | MapMan:12.5.1.8 | Gene3D:2.170.260.10 | Gene3D:3.30.160.20 | Gene3D:3.30.160.380 |
| Gene3D:3.40.50.300 | UniProt:A0A1D6N3Q5 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:Dicer_dimer_sf | InterPro:Dicer_dimerisation_dom |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 |
| GO:GO:0004525 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006396 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016891 | GO:GO:0031047 |
| GO:GO:0090501 | GO:GO:0090502 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR000999 | InterPro:IPR001650 |
| InterPro:IPR003100 | InterPro:IPR005034 | InterPro:IPR014001 | InterPro:IPR036389 | InterPro:IPR038248 | ProteinID:ONM35315.1 |
| InterPro:P-loop_NTPase | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF00636 |
| PFAM:PF02170 | PFAM:PF03368 | ScanProsite:PS00517 | PFscan:PS50142 | PFscan:PS50821 | PFscan:PS51192 |
| PFscan:PS51194 | PFscan:PS51327 | PANTHER:PTHR14950 | PANTHER:PTHR14950:SF31 | InterPro:RNase_III_dom | InterPro:RNase_III_sf |
| SMART:SM00487 | SMART:SM00490 | SMART:SM00535 | SMART:SM00949 | SUPFAM:SSF101690 | SUPFAM:SSF52540 |
| SUPFAM:SSF69065 | UniParc:UPI0008438C4D | EnsemblPlantsGene:Zm00001d042432 | EnsemblPlants:Zm00001d042432_P007 | EnsemblPlants:Zm00001d042432_T007 | SEG:seg |
Description
dicer-like 104
Coordinates
chr3:+:167033044..167043572
Molecular Weight (calculated)
187646.0 Da
IEP (calculated)
7.040
GRAVY (calculated)
-0.273
Length
1668 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDASTAGDGD TNTLKRPCKT SPPEGETDKY KRQKRECQDF SPRRYQLDVY EVATRHNTIA MLDTGAGKTM IAVMLIKHFG KINKANNDRK LIIFLAPTVQ
0101: LVTQQCEVIK SYTDFEVEHY HGAKGVDQWK AHSWQQQLLK YQVMVMTPQV LLDALRQAFL ILDMVSLMIF DECHHATGNH PYTRIMKFLL FCPFEQEFYH
0201: GSEHKPNVFG MTASPIIRKG VSSDLDCKNQ LSELENILDS KIHSVVDREE IELCVPSAKE VNRYYEPRTV SFDDLSEELE ILCSKYDGLI IQLHNRSTNQ
0301: YKDADEITKE SRKRLSNSLA KICYCLEDAG LLCASEATKI CIERGQRKGW LKGGSDTTDQ QSGQNGPILF AEISMLHMEF FQEVLDIIGK RVQQQQGIDA
0401: LLNSERGCVE AKNMGYISPK LYELMQVFLS FSDPDNVRCL VFVDRKISAR VIERTMKKIG QLSCFRVSFL TGGSSSVDAL TPKMQKDTLD SFRSGKVNLL
0501: FTTDVAEEGI HIPDCSCVIR FDLPRTTRSY VQSRGRARQR DSQYILMIEQ GNVKQDDLIS GIMRSKASMT GIASNREPED SHPSFLPTEE INEYHISKTG
0601: AKITTDSSIS VLNQYCDKLP KDKYYTPRPK FQFTHYGDGY ECTVTLPSSA MFQLLVGQKA RNMQKAKQLV CLDACKRLHQ LGALDDHLSP SVEEPPPEIS
0701: SKSSISTPGA GLGTTKRKEL HGTTKVLSMS GSWGSDRSVT KLQGYKLNFV CDQVGQKYSA FVLLIDASIA KEAATLDIDL YLHDKMVKAS VSPCGPLELD
0801: AWQMEQTKLF QALLFNSLFG KLFIGSKASK TPREFILKKD DVFLWNKENM YLLLPVDSTL DSHKSVCINW SVIDVVATAV GFMRSIYSDG KCNLTDKLNY
0901: EKNGEDLIHL ANKSCKGNDL KNMVVLAIHT GKIYTIVVVS DLCANSKFDG TTDKKEAKFR TFAEYFEKKY SIFLCHPLQP LLVLKPTHNP HNLLSSKNRD
1001: EDNVVENKNR ANSLVHMPPE LLIPLDLPID VLRVFYLFPS LMHRLESLML ASQLRSEIAY RDSDISSFVI LEAMTTLRCC EDFSMERLEL LGDSVLKYAV
1101: SAHLFMTFLN KHEGQLSSRR QETICNATLY RLGIERRIQG YIRDAAFDPR RWLAPGQLSR RPCPCECPVN SEVVTEDIHR IDDKSIIIGK ACDKGHRWIC
1201: SKTISDCVEA LIGAYYVEGG LKAAFAVLKW FQIETEIEEE LIMEALSSAS VRNYLPKVDV VELLEAKLGY TFQMKGLLIE ALTHSSQQES GATYCYQRLE
1301: FLGDAVLDIL ITRHLFLSHK DTDEGELTDL RSASVNNENF AQVAVKHNLH QFLQHSSGFL QDQITEYVNS LESSSMDRAS LLSSGPCRGP KVLGDIVESI
1401: AGAILIDSKL DLDLVWRVFK PLLSPIVTPE NLELPRFREL NEWSDKNGYF IGIKCENRGD STMAILNLQL KDLLLVRQGC GKNKVDAKAH AASLLLRDLE
1501: EKGLIIPRNA SRVEQLEKNS GTVKHCNNVL DVMDTQNVAP PRQKEVAVLS TTTPGSVLDK PLVVKVKLSK GGPRISLYES CKKLQWPMPT FEFVKVEPSV
1601: CSSSCGSSQK VAPQGFAFAS TITLHIPNGD VISLTGDGRA DKKSSQDSAA LLMLYELQRQ RRFQVQEV
0101: LVTQQCEVIK SYTDFEVEHY HGAKGVDQWK AHSWQQQLLK YQVMVMTPQV LLDALRQAFL ILDMVSLMIF DECHHATGNH PYTRIMKFLL FCPFEQEFYH
0201: GSEHKPNVFG MTASPIIRKG VSSDLDCKNQ LSELENILDS KIHSVVDREE IELCVPSAKE VNRYYEPRTV SFDDLSEELE ILCSKYDGLI IQLHNRSTNQ
0301: YKDADEITKE SRKRLSNSLA KICYCLEDAG LLCASEATKI CIERGQRKGW LKGGSDTTDQ QSGQNGPILF AEISMLHMEF FQEVLDIIGK RVQQQQGIDA
0401: LLNSERGCVE AKNMGYISPK LYELMQVFLS FSDPDNVRCL VFVDRKISAR VIERTMKKIG QLSCFRVSFL TGGSSSVDAL TPKMQKDTLD SFRSGKVNLL
0501: FTTDVAEEGI HIPDCSCVIR FDLPRTTRSY VQSRGRARQR DSQYILMIEQ GNVKQDDLIS GIMRSKASMT GIASNREPED SHPSFLPTEE INEYHISKTG
0601: AKITTDSSIS VLNQYCDKLP KDKYYTPRPK FQFTHYGDGY ECTVTLPSSA MFQLLVGQKA RNMQKAKQLV CLDACKRLHQ LGALDDHLSP SVEEPPPEIS
0701: SKSSISTPGA GLGTTKRKEL HGTTKVLSMS GSWGSDRSVT KLQGYKLNFV CDQVGQKYSA FVLLIDASIA KEAATLDIDL YLHDKMVKAS VSPCGPLELD
0801: AWQMEQTKLF QALLFNSLFG KLFIGSKASK TPREFILKKD DVFLWNKENM YLLLPVDSTL DSHKSVCINW SVIDVVATAV GFMRSIYSDG KCNLTDKLNY
0901: EKNGEDLIHL ANKSCKGNDL KNMVVLAIHT GKIYTIVVVS DLCANSKFDG TTDKKEAKFR TFAEYFEKKY SIFLCHPLQP LLVLKPTHNP HNLLSSKNRD
1001: EDNVVENKNR ANSLVHMPPE LLIPLDLPID VLRVFYLFPS LMHRLESLML ASQLRSEIAY RDSDISSFVI LEAMTTLRCC EDFSMERLEL LGDSVLKYAV
1101: SAHLFMTFLN KHEGQLSSRR QETICNATLY RLGIERRIQG YIRDAAFDPR RWLAPGQLSR RPCPCECPVN SEVVTEDIHR IDDKSIIIGK ACDKGHRWIC
1201: SKTISDCVEA LIGAYYVEGG LKAAFAVLKW FQIETEIEEE LIMEALSSAS VRNYLPKVDV VELLEAKLGY TFQMKGLLIE ALTHSSQQES GATYCYQRLE
1301: FLGDAVLDIL ITRHLFLSHK DTDEGELTDL RSASVNNENF AQVAVKHNLH QFLQHSSGFL QDQITEYVNS LESSSMDRAS LLSSGPCRGP KVLGDIVESI
1401: AGAILIDSKL DLDLVWRVFK PLLSPIVTPE NLELPRFREL NEWSDKNGYF IGIKCENRGD STMAILNLQL KDLLLVRQGC GKNKVDAKAH AASLLLRDLE
1501: EKGLIIPRNA SRVEQLEKNS GTVKHCNNVL DVMDTQNVAP PRQKEVAVLS TTTPGSVLDK PLVVKVKLSK GGPRISLYES CKKLQWPMPT FEFVKVEPSV
1601: CSSSCGSSQK VAPQGFAFAS TITLHIPNGD VISLTGDGRA DKKSSQDSAA LLMLYELQRQ RRFQVQEV
0001: MHSSLEPEKM EEGGGSNSLK RKFSEIDGDQ NLDSVSSPMM TDSNGSYELK VYEVAKNRNI IAVLGTGIDK SEITKRLIKA MGSSDTDKRL IIFLAPTVNL
0101: QCCEIRALVN LKVEEYFGAK GVDKWTSQRW DEEFSKHDVL VMTPQILLDV LRSAFLKLEM VCLLIIDECH HTTGNHPYAK LMKIFNPEER EGVEKFATTV
0201: KEGPILYNPS PSCSLELKEK LETSHLKFDA SLRRLQELGK DSFLNMDNKF ETYQKRLSID YREILHCLDN LGLICAHLAA EVCLEKISDT KEESETYKEC
0301: SMVCKEFLED ILSTIGVYLP QDDKSLVDLQ QNHLSAVISG HVSPKLKELF HLLDSFRGDK QKQCLILVER IITAKVIERF VKKEASLAYL NVLYLTENNP
0401: STNVSAQKMQ IEIPDLFQHG KVNLLFITDV VEEGFQVPDC SCMVCFDLPK TMCSYSQSQK HAKQSNSKSI MFLERGNPKQ RDHLHDLMRR EVLIQDPEAP
0501: NLKSCPPPVK NGHGVKEIGS MVIPDSNITV SEEAASTQTM SDPPSRNEQL PPCKKLRLDN NLLQSNGKEK VASSKSKSSS SAAGSKKRKE LHGTTCANAL
0601: SGTWGENIDG ATFQAYKFDF CCNISGEVYS SFSLLLESTL AEDVGKVEMD LYLVRKLVKA SVSPCGQIRL SQEELVKAKY FQQFFFNGMF GKLFVGSKSQ
0701: GTKREFLLQT DTSSLWHPAF MFLLLPVETN DLASSATIDW SAINSCASIV EFLKKNSLLD LRDSDGNQCN TSSGQEVLLD DKMEETNLIH FANASSDKNS
0801: LEELVVIAIH TGRIYSIVEA VSDSSAMSPF EVDASSGYAT YAEYFNKKYG IVLAHPNQPL MKLKQSHHAH NLLVDFNEEM VVKTEPKAGN VRKRKPNIHA
0901: HLPPELLARI DVPRAVLKSI YLLPSVMHRL ESLMLASQLR EEIDCSIDNF SISSTSILEA VTTLTCPESF SMERLELLGD SVLKYVASCH LFLKYPDKDE
1001: GQLSRQRQSI ISNSNLHRLT TSRKLQGYIR NGAFEPRRWT APGQFSLFPV PCKCGIDTRE VPLDPKFFTE NMTIKIGKSC DMGHRWVVSK SVSDCAEALI
1101: GAYYVSGGLS ASLHMMKWLG IDVDFDPNLV VEAINRVSLR CYIPKEDELI ELERKIQHEF SAKFLLKEAI THSSLRESYS YERLEFLGDS VLDFLITRHL
1201: FNTYEQTGPG EMTDLRSACV NNENFAQVAV KNNLHTHLQR CATVLETQIN DYLMSFQKPD ETGRSIPSIQ GPKALGDVVE SIAGALLIDT RLDLDQVWRV
1301: FEPLLSPLVT PDKLQLPPYR ELNELCDSLG YFFRVKCSND GVKAQATIQL QLDDVLLTGD GSEQTNKLAL GKAASHLLTQ LEKRNISRKT SLGDNQSSMD
1401: VNLACNHSDR ETLTSETTEI QSIVIPFIGP INMKKGGPRG TLHEFCKKHL WPMPTFDTSE EKSRTPFEFI DGGEKRTSFS SFTSTITLRI PNREAVMYAG
1501: EARPDKKSSF DSAVVELLYE LERRKIVIIQ K
0101: QCCEIRALVN LKVEEYFGAK GVDKWTSQRW DEEFSKHDVL VMTPQILLDV LRSAFLKLEM VCLLIIDECH HTTGNHPYAK LMKIFNPEER EGVEKFATTV
0201: KEGPILYNPS PSCSLELKEK LETSHLKFDA SLRRLQELGK DSFLNMDNKF ETYQKRLSID YREILHCLDN LGLICAHLAA EVCLEKISDT KEESETYKEC
0301: SMVCKEFLED ILSTIGVYLP QDDKSLVDLQ QNHLSAVISG HVSPKLKELF HLLDSFRGDK QKQCLILVER IITAKVIERF VKKEASLAYL NVLYLTENNP
0401: STNVSAQKMQ IEIPDLFQHG KVNLLFITDV VEEGFQVPDC SCMVCFDLPK TMCSYSQSQK HAKQSNSKSI MFLERGNPKQ RDHLHDLMRR EVLIQDPEAP
0501: NLKSCPPPVK NGHGVKEIGS MVIPDSNITV SEEAASTQTM SDPPSRNEQL PPCKKLRLDN NLLQSNGKEK VASSKSKSSS SAAGSKKRKE LHGTTCANAL
0601: SGTWGENIDG ATFQAYKFDF CCNISGEVYS SFSLLLESTL AEDVGKVEMD LYLVRKLVKA SVSPCGQIRL SQEELVKAKY FQQFFFNGMF GKLFVGSKSQ
0701: GTKREFLLQT DTSSLWHPAF MFLLLPVETN DLASSATIDW SAINSCASIV EFLKKNSLLD LRDSDGNQCN TSSGQEVLLD DKMEETNLIH FANASSDKNS
0801: LEELVVIAIH TGRIYSIVEA VSDSSAMSPF EVDASSGYAT YAEYFNKKYG IVLAHPNQPL MKLKQSHHAH NLLVDFNEEM VVKTEPKAGN VRKRKPNIHA
0901: HLPPELLARI DVPRAVLKSI YLLPSVMHRL ESLMLASQLR EEIDCSIDNF SISSTSILEA VTTLTCPESF SMERLELLGD SVLKYVASCH LFLKYPDKDE
1001: GQLSRQRQSI ISNSNLHRLT TSRKLQGYIR NGAFEPRRWT APGQFSLFPV PCKCGIDTRE VPLDPKFFTE NMTIKIGKSC DMGHRWVVSK SVSDCAEALI
1101: GAYYVSGGLS ASLHMMKWLG IDVDFDPNLV VEAINRVSLR CYIPKEDELI ELERKIQHEF SAKFLLKEAI THSSLRESYS YERLEFLGDS VLDFLITRHL
1201: FNTYEQTGPG EMTDLRSACV NNENFAQVAV KNNLHTHLQR CATVLETQIN DYLMSFQKPD ETGRSIPSIQ GPKALGDVVE SIAGALLIDT RLDLDQVWRV
1301: FEPLLSPLVT PDKLQLPPYR ELNELCDSLG YFFRVKCSND GVKAQATIQL QLDDVLLTGD GSEQTNKLAL GKAASHLLTQ LEKRNISRKT SLGDNQSSMD
1401: VNLACNHSDR ETLTSETTEI QSIVIPFIGP INMKKGGPRG TLHEFCKKHL WPMPTFDTSE EKSRTPFEFI DGGEKRTSFS SFTSTITLRI PNREAVMYAG
1501: EARPDKKSSF DSAVVELLYE LERRKIVIIQ K
Arabidopsis Description
DCL3Endoribonuclease Dicer homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXW7]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.