Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d042432_P007 | Maize | cytosol | 92.52 | 91.91 |
| Os01t0909200-01 | Rice | cytosol | 73.08 | 73.35 |
| TraesCS3D01G411200.6 | Wheat | nucleus | 67.35 | 68.3 |
| TraesCS3A01G415400.2 | Wheat | nucleus | 68.98 | 68.12 |
| TraesCS3B01G450600.3 | Wheat | nucleus | 68.74 | 67.92 |
| HORVU3Hr1G092430.9 | Barley | cytosol, nucleus, plastid | 67.89 | 66.77 |
| GSMUA_Achr10P... | Banana | nucleus | 22.75 | 56.86 |
| KRH61605 | Soybean | nucleus | 48.16 | 47.67 |
| GSMUA_Achr10P... | Banana | cytosol | 12.01 | 47.04 |
| Solyc08g067210.2.1 | Tomato | nucleus | 40.37 | 46.78 |
| KRH52276 | Soybean | cytosol | 13.7 | 45.13 |
| OQU91611 | Sorghum | nucleus, plastid | 44.48 | 45.02 |
| AT3G43920.2 | Thale cress | cytosol, nucleus, plastid | 41.28 | 43.29 |
| CDY30942 | Canola | nucleus | 32.59 | 42.82 |
| Bra019456.1-P | Field mustard | nucleus | 36.21 | 41.47 |
| CDY21223 | Canola | nucleus | 37.9 | 41.02 |
| VIT_04s0008g02170.t01 | Wine grape | mitochondrion | 45.5 | 38.81 |
| EES13704 | Sorghum | cytosol | 5.85 | 33.33 |
| OQU91441 | Sorghum | nucleus | 25.41 | 30.38 |
| OQU81938 | Sorghum | mitochondrion | 29.33 | 29.19 |
| KXG38096 | Sorghum | plastid | 12.61 | 26.86 |
| KXG40313 | Sorghum | cytosol, nucleus, plastid | 31.02 | 26.65 |
| KXG21693 | Sorghum | plastid | 6.58 | 24.66 |
Protein Annotations
| Gene3D:1.10.1520.10 | MapMan:12.5.1.8 | Gene3D:2.170.260.10 | Gene3D:3.30.160.20 | Gene3D:3.30.160.380 | Gene3D:3.40.50.300 |
| UniProt:A0A1B6Q7R2 | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:Dicer_dimer_sf | InterPro:Dicer_dimerisation_dom | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004525 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016891 | GO:GO:0031047 | GO:GO:0090501 | GO:GO:0090502 |
| InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR000999 | InterPro:IPR001650 | InterPro:IPR003100 | InterPro:IPR005034 |
| InterPro:IPR014001 | InterPro:IPR036389 | InterPro:IPR038248 | EnsemblPlants:KXG33962 | ProteinID:KXG33962 | ProteinID:KXG33962.1 |
| InterPro:P-loop_NTPase | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF00636 |
| PFAM:PF02170 | PFAM:PF03368 | ScanProsite:PS00517 | PFscan:PS50142 | PFscan:PS50821 | PFscan:PS51192 |
| PFscan:PS51194 | PFscan:PS51327 | PANTHER:PTHR14950 | PANTHER:PTHR14950:SF31 | InterPro:RNase_III_dom | InterPro:RNase_III_sf |
| SMART:SM00487 | SMART:SM00490 | SMART:SM00535 | SMART:SM00949 | EnsemblPlantsGene:SORBI_3003G396700 | SUPFAM:SSF101690 |
| SUPFAM:SSF52540 | SUPFAM:SSF54768 | SUPFAM:SSF69065 | UniParc:UPI00081ABCC4 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr3:-:70664245..70674636
Molecular Weight (calculated)
186545.0 Da
IEP (calculated)
7.208
GRAVY (calculated)
-0.304
Length
1657 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEAAAAADGG MNLLKRPSNS SPPEDETDKH KRQKRECQDF TPRRYQLDVY EVAMRQNTIA MLDTGAGKTM IAVMLIKHFG KISKANNDRK LIIFLAPTVQ
0101: LVTQQCEVIK SYTDFEVEHY HGAKGVDQWK AHSWQQQFLK YQVMVMTPQV LLDALRQAFL ILDMVSLMIF DECHHATGNH PYTRIMKEFY HGSEHKPNVF
0201: GMTASPIIRK GVSSDLDCEN QLSELENILD SKIHAVVDRE EIELCVPSAK EVNRYYEPRT VSFEDLSEEL EILCSKYDGL IVQLHNRSTN QYKDADEITK
0301: ESRRRLSKSL AKICYCLEDA GLLCASEATK ICIERGQRKG WLKGGSDTTD QQSDPNGPIL FAEISMLHMK FFQEVLDIID KRLQQQQGID ALLNSESGCV
0401: EAAKMGYISP KLYELMRVFL SFSDSDNVRC LIFVDRKISA RVIERTMKKI GRLSCFRVSF LTGGSSSVDA LTPKMQKDTL DSFRSGKVNL LFTTDVAEEG
0501: IHIPDCSCVI RFDLPRTTRS YVQSRGRARQ RDSQYILMIE KGNVKQSDLI SRIMRSKTSM TEIASNREPE DSHRNFFPIE EINEYHISTT GAKITTDSSI
0601: SVLNQYCDKL PKDKYYTPRP TFQFTHYGDG YECTVTLPSS AMFQLLVGPK ARNMQKAKQL VCLDACKRLH QLGALDDHLS PSVEETPLEI SSKSSISTSG
0701: AGLGTTKRKE LHGTTKVLSM SGSWGSDKSV TKLQGYKLNF VCDQVDQKYC DFVLLIDTSI AKEAATLNID LYLHDKMVKA SVSPCGPLEL DARQMEKTKL
0801: FQALLFNGLF GKLFIGSKAS KTPREFILKK DDAFLWNKEN MYLLLPVDST QDSHKSVCIN WSIVDIAATT VGLMRSIYSD GKHNLKDKLN HEKNDENFIR
0901: LANKSCKADD LKNMVVLAIH TGKIYTVLKV SDLCANSKFD GTSDKKEAKF QTFAEYFEKK YNIFLCHPLQ PLLVLKPTHN PHNLLSSKNR DEGNVVENKN
1001: RANSLVHMPP ELLIPLDLPV DVLRVFYLFP SLMHRLESLM LASQLRSEIA YTDSDISSFV ILEAITTLRC CEDFSMERLE LLGDSVLKYA VSAHLFMTFL
1101: NKHEGQLSSR RQETICNATL YRLGTERRIQ GYIRDAAFDP RRWLAPGQLS SRPCPCECPV KSEVITEDIH RIDDKSIIIG KACDKGHRWI CSKTISDCVE
1201: AIIGAYYVEG GLKAAFAVLK WLQIETLEEE QIMEALSSAS VRNYLPKVDV VEFLEAKLGY TFQVKGLLIE ALTHPSQQES GATYCYQRLE FLGDAVLDIL
1301: ITRHLFLSHK DTDEGELTDL RSASVNNENF AQVAVKHNLH QFLQHSSGFL QDQITEYVNS LEGSSMDRTS LLSSGPSRGP KVLGDIVESI AGAILIDSKL
1401: DLDLVWRVFK PLLSPIVTPE NLELPPFREL NEWCDKNGYF IGIKCENRGD KTTAILSLQL KDLLLVRQGC GKNKIDAKAH AASLLLRDLE EKGLIIPKNA
1501: SRVEQFEKNS GTRNHCNNLV DVMDTQNVAP PRQKELPVSS TAPGSVLDKP LVVKVKLSKG GPRVSLYESC KKLQWPMPMF EFVKVEPSVC SSSGDSSQKV
1601: APQGYAFAST ITLHIPNGDI ISLTGDGRAD KKSSQDSAAL LMLYELQRRG RFQVQEV
0101: LVTQQCEVIK SYTDFEVEHY HGAKGVDQWK AHSWQQQFLK YQVMVMTPQV LLDALRQAFL ILDMVSLMIF DECHHATGNH PYTRIMKEFY HGSEHKPNVF
0201: GMTASPIIRK GVSSDLDCEN QLSELENILD SKIHAVVDRE EIELCVPSAK EVNRYYEPRT VSFEDLSEEL EILCSKYDGL IVQLHNRSTN QYKDADEITK
0301: ESRRRLSKSL AKICYCLEDA GLLCASEATK ICIERGQRKG WLKGGSDTTD QQSDPNGPIL FAEISMLHMK FFQEVLDIID KRLQQQQGID ALLNSESGCV
0401: EAAKMGYISP KLYELMRVFL SFSDSDNVRC LIFVDRKISA RVIERTMKKI GRLSCFRVSF LTGGSSSVDA LTPKMQKDTL DSFRSGKVNL LFTTDVAEEG
0501: IHIPDCSCVI RFDLPRTTRS YVQSRGRARQ RDSQYILMIE KGNVKQSDLI SRIMRSKTSM TEIASNREPE DSHRNFFPIE EINEYHISTT GAKITTDSSI
0601: SVLNQYCDKL PKDKYYTPRP TFQFTHYGDG YECTVTLPSS AMFQLLVGPK ARNMQKAKQL VCLDACKRLH QLGALDDHLS PSVEETPLEI SSKSSISTSG
0701: AGLGTTKRKE LHGTTKVLSM SGSWGSDKSV TKLQGYKLNF VCDQVDQKYC DFVLLIDTSI AKEAATLNID LYLHDKMVKA SVSPCGPLEL DARQMEKTKL
0801: FQALLFNGLF GKLFIGSKAS KTPREFILKK DDAFLWNKEN MYLLLPVDST QDSHKSVCIN WSIVDIAATT VGLMRSIYSD GKHNLKDKLN HEKNDENFIR
0901: LANKSCKADD LKNMVVLAIH TGKIYTVLKV SDLCANSKFD GTSDKKEAKF QTFAEYFEKK YNIFLCHPLQ PLLVLKPTHN PHNLLSSKNR DEGNVVENKN
1001: RANSLVHMPP ELLIPLDLPV DVLRVFYLFP SLMHRLESLM LASQLRSEIA YTDSDISSFV ILEAITTLRC CEDFSMERLE LLGDSVLKYA VSAHLFMTFL
1101: NKHEGQLSSR RQETICNATL YRLGTERRIQ GYIRDAAFDP RRWLAPGQLS SRPCPCECPV KSEVITEDIH RIDDKSIIIG KACDKGHRWI CSKTISDCVE
1201: AIIGAYYVEG GLKAAFAVLK WLQIETLEEE QIMEALSSAS VRNYLPKVDV VEFLEAKLGY TFQVKGLLIE ALTHPSQQES GATYCYQRLE FLGDAVLDIL
1301: ITRHLFLSHK DTDEGELTDL RSASVNNENF AQVAVKHNLH QFLQHSSGFL QDQITEYVNS LEGSSMDRTS LLSSGPSRGP KVLGDIVESI AGAILIDSKL
1401: DLDLVWRVFK PLLSPIVTPE NLELPPFREL NEWCDKNGYF IGIKCENRGD KTTAILSLQL KDLLLVRQGC GKNKIDAKAH AASLLLRDLE EKGLIIPKNA
1501: SRVEQFEKNS GTRNHCNNLV DVMDTQNVAP PRQKELPVSS TAPGSVLDKP LVVKVKLSKG GPRVSLYESC KKLQWPMPMF EFVKVEPSVC SSSGDSSQKV
1601: APQGYAFAST ITLHIPNGDI ISLTGDGRAD KKSSQDSAAL LMLYELQRRG RFQVQEV
0001: MHSSLEPEKM EEGGGSNSLK RKFSEIDGDQ NLDSVSSPMM TDSNGSYELK VYEVAKNRNI IAVLGTGIDK SEITKRLIKA MGSSDTDKRL IIFLAPTVNL
0101: VKQQCCEIRA LVNLKVEEYF GAKGVDKWTS QRWDEEFSKH DVLVMTPQIL LDVLRSAFLK LEMVCLLIID ECHHTTGNHP YAKLMKEFYH ESTSKPKIFG
0201: LTASAVIRKG IVSSPSNYAA QVSELERLMD SKIFNPEERE GVEKFATTVK EGPILYNPSP SCSLELKEKL ETSHLKFDAS LRRLQELGKD SFLNMDNKFE
0301: TYQKRLSIDY REILHCLDNL GLICAHLAAE VCLEKISDTK EESETYKECS MVCKEFLEDI LSTIGVYLPQ DDKSLVDLQQ NHLSAVISGH VSPKLKELFH
0401: LLDSFRGDKQ KQCLILVERI ITAKVIERFV KKEASLAYLN VLYLTENNPS TNVSAQKMQI EIPDLFQHGK VNLLFITDVV EEGFQVPDCS CMVCFDLPKT
0501: MCSYSQSQKH AKQSNSKSIM FLERGNPKQR DHLHDLMRRE VLIQDPEAPN LKSCPPPVKN GHGVKEIGSM VIPDSNITVS EEAASTQTMS DPPSRNEQLP
0601: PCKKLRLDNN LLQSNGKEKV ASSKSKSSSS AAGSKKRKEL HGTTCANALS GTWGENIDGA TFQAYKFDFC CNISGEVYSS FSLLLESTLA EDVGKVEMDL
0701: YLVRKLVKAS VSPCGQIRLS QEELVKAKYF QQFFFNGMFG KLFVGSKSQG TKREFLLQTD TSSLWHPAFM FLLLPVETND LASSATIDWS AINSCASIVE
0801: FLKKNSLLDL RDSDGNQCNT SSGQEVLLDD KMEETNLIHF ANASSDKNSL EELVVIAIHT GRIYSIVEAV SDSSAMSPFE VDASSGYATY AEYFNKKYGI
0901: VLAHPNQPLM KLKQSHHAHN LLVDFNEEMV VKTEPKAGNV RKRKPNIHAH LPPELLARID VPRAVLKSIY LLPSVMHRLE SLMLASQLRE EIDCSIDNFS
1001: ISSTSILEAV TTLTCPESFS MERLELLGDS VLKYVASCHL FLKYPDKDEG QLSRQRQSII SNSNLHRLTT SRKLQGYIRN GAFEPRRWTA PGQFSLFPVP
1101: CKCGIDTREV PLDPKFFTEN MTIKIGKSCD MGHRWVVSKS VSDCAEALIG AYYVSGGLSA SLHMMKWLGI DVDFDPNLVV EAINRVSLRC YIPKEDELIE
1201: LERKIQHEFS AKFLLKEAIT HSSLRESYSY ERLEFLGDSV LDFLITRHLF NTYEQTGPGE MTDLRSACVN NENFAQVAVK NNLHTHLQRC ATVLETQIND
1301: YLMSFQKPDE TGRSIPSIQG PKALGDVVES IAGALLIDTR LDLDQVWRVF EPLLSPLVTP DKLQLPPYRE LNELCDSLGY FFRVKCSNDG VKAQATIQLQ
1401: LDDVLLTGDG SEQTNKLALG KAASHLLTQL EKRNISRKTS LGDNQSSMDV NLACNHSDRE TLTSETTEIQ SIVIPFIGPI NMKKGGPRGT LHEFCKKHLW
1501: PMPTFDTSEE KSRTPFEFID GGEKRTSFSS FTSTITLRIP NREAVMYAGE ARPDKKSSFD SAVVELLYEL ERRKIVIIQK
0101: VKQQCCEIRA LVNLKVEEYF GAKGVDKWTS QRWDEEFSKH DVLVMTPQIL LDVLRSAFLK LEMVCLLIID ECHHTTGNHP YAKLMKEFYH ESTSKPKIFG
0201: LTASAVIRKG IVSSPSNYAA QVSELERLMD SKIFNPEERE GVEKFATTVK EGPILYNPSP SCSLELKEKL ETSHLKFDAS LRRLQELGKD SFLNMDNKFE
0301: TYQKRLSIDY REILHCLDNL GLICAHLAAE VCLEKISDTK EESETYKECS MVCKEFLEDI LSTIGVYLPQ DDKSLVDLQQ NHLSAVISGH VSPKLKELFH
0401: LLDSFRGDKQ KQCLILVERI ITAKVIERFV KKEASLAYLN VLYLTENNPS TNVSAQKMQI EIPDLFQHGK VNLLFITDVV EEGFQVPDCS CMVCFDLPKT
0501: MCSYSQSQKH AKQSNSKSIM FLERGNPKQR DHLHDLMRRE VLIQDPEAPN LKSCPPPVKN GHGVKEIGSM VIPDSNITVS EEAASTQTMS DPPSRNEQLP
0601: PCKKLRLDNN LLQSNGKEKV ASSKSKSSSS AAGSKKRKEL HGTTCANALS GTWGENIDGA TFQAYKFDFC CNISGEVYSS FSLLLESTLA EDVGKVEMDL
0701: YLVRKLVKAS VSPCGQIRLS QEELVKAKYF QQFFFNGMFG KLFVGSKSQG TKREFLLQTD TSSLWHPAFM FLLLPVETND LASSATIDWS AINSCASIVE
0801: FLKKNSLLDL RDSDGNQCNT SSGQEVLLDD KMEETNLIHF ANASSDKNSL EELVVIAIHT GRIYSIVEAV SDSSAMSPFE VDASSGYATY AEYFNKKYGI
0901: VLAHPNQPLM KLKQSHHAHN LLVDFNEEMV VKTEPKAGNV RKRKPNIHAH LPPELLARID VPRAVLKSIY LLPSVMHRLE SLMLASQLRE EIDCSIDNFS
1001: ISSTSILEAV TTLTCPESFS MERLELLGDS VLKYVASCHL FLKYPDKDEG QLSRQRQSII SNSNLHRLTT SRKLQGYIRN GAFEPRRWTA PGQFSLFPVP
1101: CKCGIDTREV PLDPKFFTEN MTIKIGKSCD MGHRWVVSKS VSDCAEALIG AYYVSGGLSA SLHMMKWLGI DVDFDPNLVV EAINRVSLRC YIPKEDELIE
1201: LERKIQHEFS AKFLLKEAIT HSSLRESYSY ERLEFLGDSV LDFLITRHLF NTYEQTGPGE MTDLRSACVN NENFAQVAVK NNLHTHLQRC ATVLETQIND
1301: YLMSFQKPDE TGRSIPSIQG PKALGDVVES IAGALLIDTR LDLDQVWRVF EPLLSPLVTP DKLQLPPYRE LNELCDSLGY FFRVKCSNDG VKAQATIQLQ
1401: LDDVLLTGDG SEQTNKLALG KAASHLLTQL EKRNISRKTS LGDNQSSMDV NLACNHSDRE TLTSETTEIQ SIVIPFIGPI NMKKGGPRGT LHEFCKKHLW
1501: PMPTFDTSEE KSRTPFEFID GGEKRTSFSS FTSTITLRIP NREAVMYAGE ARPDKKSSFD SAVVELLYEL ERRKIVIIQK
Arabidopsis Description
DCL3Endoribonuclease Dicer homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXW7]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.