Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G411200.6 | Wheat | nucleus | 88.13 | 90.88 |
| TraesCS3B01G450600.3 | Wheat | nucleus | 90.39 | 90.82 |
| TraesCS3A01G415400.2 | Wheat | nucleus | 89.97 | 90.35 |
| Os01t0909200-01 | Rice | cytosol | 68.19 | 69.59 |
| KXG33962 | Sorghum | nucleus | 66.77 | 67.89 |
| Zm00001d042432_P007 | Maize | cytosol | 65.76 | 66.43 |
| GSMUA_Achr10P... | Banana | nucleus | 20.95 | 53.24 |
| GSMUA_Achr10P... | Banana | cytosol | 11.51 | 45.86 |
| Solyc08g067210.2.1 | Tomato | nucleus | 38.87 | 45.8 |
| KRH61605 | Soybean | nucleus | 45.16 | 45.46 |
| HORVU1Hr1G042710.5 | Barley | cytosol, mitochondrion, nucleus | 43.03 | 43.08 |
| KRH52276 | Soybean | cytosol | 12.58 | 42.15 |
| AT3G43920.2 | Thale cress | cytosol, nucleus, plastid | 39.11 | 41.71 |
| CDY30942 | Canola | nucleus | 31.1 | 41.55 |
| Bra019456.1-P | Field mustard | nucleus | 35.31 | 41.12 |
| CDY21223 | Canola | nucleus | 36.74 | 40.43 |
| VIT_04s0008g02170.t01 | Wine grape | mitochondrion | 42.2 | 36.59 |
| HORVU7Hr1G082860.4 | Barley | plastid | 6.11 | 28.69 |
| HORVU5Hr1G019300.8 | Barley | plastid | 25.04 | 28.61 |
| HORVU2Hr1G088270.9 | Barley | endoplasmic reticulum | 26.53 | 27.34 |
| HORVU7Hr1G115000.1 | Barley | nucleus | 2.97 | 26.6 |
| HORVU7Hr1G115100.2 | Barley | plastid | 6.35 | 26.23 |
| HORVU4Hr1G084890.7 | Barley | cytosol, nucleus, plastid | 29.97 | 25.29 |
Protein Annotations
| Gene3D:1.10.1520.10 | MapMan:12.5.1.8 | Gene3D:2.170.260.10 | Gene3D:3.30.160.20 | Gene3D:3.30.160.380 | Gene3D:3.40.50.300 |
| UniProt:A0A287MAB0 | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:Dicer_dimer_sf | InterPro:Dicer_dimerisation_dom | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004525 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016891 | GO:GO:0031047 | GO:GO:0090501 | GO:GO:0090502 |
| EnsemblPlantsGene:HORVU3Hr1G092430 | EnsemblPlants:HORVU3Hr1G092430.9 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR000999 | InterPro:IPR001650 |
| InterPro:IPR003100 | InterPro:IPR005034 | InterPro:IPR014001 | InterPro:IPR014720 | InterPro:IPR036389 | InterPro:IPR038248 |
| InterPro:P-loop_NTPase | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF00636 |
| PFAM:PF02170 | PFAM:PF03368 | ScanProsite:PS00517 | PFscan:PS50137 | PFscan:PS50142 | PFscan:PS50821 |
| PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51327 | PANTHER:PTHR14950 | PANTHER:PTHR14950:SF31 | InterPro:RNase_III_dom |
| InterPro:RNase_III_sf | SMART:SM00358 | SMART:SM00487 | SMART:SM00490 | SMART:SM00535 | SMART:SM00949 |
| SUPFAM:SSF101690 | SUPFAM:SSF52540 | SUPFAM:SSF54768 | SUPFAM:SSF69065 | UniParc:UPI000B486B73 | InterPro:dsRBD_dom |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:638064590..638074096
Molecular Weight (calculated)
188449.0 Da
IEP (calculated)
6.272
GRAVY (calculated)
-0.247
Length
1685 amino acids
Sequence
(BLAST)
(BLAST)
0001: ASACQPQLPN PKAEASTTAK LAHYNSLLAE AEAEPAAGGR GGDEPMDATG SAEAAACDVN INPLKRSSES CPQGDSLKRQ KTESEVFTPR RYQLDVYEVA
0101: KGRNTIAMLD TGAGKTMIAV MLMKEFGKKI DKSNNNGKII FLAPTVQLVT QQCEVIKTHT DFDVELYCGA SGVDHWTPQR WKEKVSKSQV MVMIPDVLLT
0201: ALRRAFLSLD MVSLMIFDEC HRATRNHPYA MIMKDYYHQS DHKPNVFGMT ASPVIRKGVS SNLDCEVQFA ELEKLLNAKI YTVADREEIE LCAPSAKEVD
0301: RYYDPKRVCF KELSEELGLL HSKYDALITT LQNKPNYQNK ESGEIAKESR GRLFNSSAKI LYCIDDVGLL CASEATTIYI ERGQRNGWLK KASDATNTQC
0401: VANSSFLLAE ISALHLKFFE DMSRIVDKHL QQGSDVLLNS DSGCVEAMKT GYISPKLYEL IQIVRSFCNL DHVQCLIFVD RKITARVMER IMKKIGYLSH
0501: FTVSSLTGGS SSVDALTPKM QKDTLDSFRS GKVNLLFTTD VAEEGIDVTD CSCVIRFDLP KTTRSYMQSR GRARQKDSQY ILMIERENVK QNNLISAILR
0601: SEKSMVETAL NRDSEDLLPG FFPVEEKNEY HVGTTGAKVT AGSSISVIAQ YCDKLPGDKY DTTKPSFEFT NHGDGFVCTL TLPSSDMLPP LVGPKARNKK
0701: RAKQLVCLDA CKQLHLLGVL TDSLSVEEAP LESVNKTDVL TSLAGVGTTK RKELHGTTRV CGLSGTWASE RTAINLQGYR MKFLCDQVGQ KYSDFVLLID
0801: KTIAHEAANL DIELFLHDKM VKASVSPCGL FELDVQQMEQ AKLFQALMFN GLFGKLFTGS KSSDVPWEFI LSKDDNFIWN NPNMYLILPM DPTVESHDIS
0901: CINWRVIDEA ATAVKLMRKI YFEEKINIPG ILDFDQNDED LIHLANTSCE ANFLRNVVVL AVHTGKIYTA LNVADLSANS TFDGVSDEKE TEFHTFAEYF
1001: EKKYGIVLRH PSQPLLVLKP SHRPHNILSS KLRDEGNDEK KKGGTSDITK ANNRVHMPPE LLIPLNFSDD ILRTFYLFPS LMHRIETLML ASQLKSEISY
1101: DDSNVSSFLI LEAITTLRCS EDFSMERLEL LGDSVLKYVV SCHLFLKFPD KDEGQLTSSR VDIISNAALY GFGIEHKIQG YIRDAAFDPR RWLAPGQLSI
1201: HPVPCNCPVN SEAVTEDIHV KVGQLCDKGH RWMCSKTISD CVEAIIGAYY VEGGLRAAMA VLKWLGIDVE VEEELIGQFL SASVQTYLPK NDVIEKFEAK
1301: LGYVFLMKGL LLEALTHPSL QESAERYSYQ RLEFLGDAVL DILLTRHLFH SHKDTDEGEL TDLRSASVNN ENFARLAVKH KFYQCLQHSS GKLPDNITEY
1401: VNSLENPSMD KINSLSDAAL RGPKVLGDIV ESIAGAILID RKLDLEVVWG IFKPLLSPIV TPEKLELPPF RELLEWCSEN GYFIGIKCTD GDKIEATMDV
1501: QLKETLLIRR SCGKSKKDAK AHAASMLLKD LEEQGLLVPK NASNKQQFQD HRNIFDAMDI QLSTPIRRKK SAGSKIADSL DKPVDWAVRM SKGGPRAALH
1601: EFCKMLQWPR PIFDSAEVEQ SVPTPQGQGF SFVSTIKLHI PNSDVISLRG DGFADKKSAM DSAALLMLYE LQRRGRLQVQ EIHVQ
0101: KGRNTIAMLD TGAGKTMIAV MLMKEFGKKI DKSNNNGKII FLAPTVQLVT QQCEVIKTHT DFDVELYCGA SGVDHWTPQR WKEKVSKSQV MVMIPDVLLT
0201: ALRRAFLSLD MVSLMIFDEC HRATRNHPYA MIMKDYYHQS DHKPNVFGMT ASPVIRKGVS SNLDCEVQFA ELEKLLNAKI YTVADREEIE LCAPSAKEVD
0301: RYYDPKRVCF KELSEELGLL HSKYDALITT LQNKPNYQNK ESGEIAKESR GRLFNSSAKI LYCIDDVGLL CASEATTIYI ERGQRNGWLK KASDATNTQC
0401: VANSSFLLAE ISALHLKFFE DMSRIVDKHL QQGSDVLLNS DSGCVEAMKT GYISPKLYEL IQIVRSFCNL DHVQCLIFVD RKITARVMER IMKKIGYLSH
0501: FTVSSLTGGS SSVDALTPKM QKDTLDSFRS GKVNLLFTTD VAEEGIDVTD CSCVIRFDLP KTTRSYMQSR GRARQKDSQY ILMIERENVK QNNLISAILR
0601: SEKSMVETAL NRDSEDLLPG FFPVEEKNEY HVGTTGAKVT AGSSISVIAQ YCDKLPGDKY DTTKPSFEFT NHGDGFVCTL TLPSSDMLPP LVGPKARNKK
0701: RAKQLVCLDA CKQLHLLGVL TDSLSVEEAP LESVNKTDVL TSLAGVGTTK RKELHGTTRV CGLSGTWASE RTAINLQGYR MKFLCDQVGQ KYSDFVLLID
0801: KTIAHEAANL DIELFLHDKM VKASVSPCGL FELDVQQMEQ AKLFQALMFN GLFGKLFTGS KSSDVPWEFI LSKDDNFIWN NPNMYLILPM DPTVESHDIS
0901: CINWRVIDEA ATAVKLMRKI YFEEKINIPG ILDFDQNDED LIHLANTSCE ANFLRNVVVL AVHTGKIYTA LNVADLSANS TFDGVSDEKE TEFHTFAEYF
1001: EKKYGIVLRH PSQPLLVLKP SHRPHNILSS KLRDEGNDEK KKGGTSDITK ANNRVHMPPE LLIPLNFSDD ILRTFYLFPS LMHRIETLML ASQLKSEISY
1101: DDSNVSSFLI LEAITTLRCS EDFSMERLEL LGDSVLKYVV SCHLFLKFPD KDEGQLTSSR VDIISNAALY GFGIEHKIQG YIRDAAFDPR RWLAPGQLSI
1201: HPVPCNCPVN SEAVTEDIHV KVGQLCDKGH RWMCSKTISD CVEAIIGAYY VEGGLRAAMA VLKWLGIDVE VEEELIGQFL SASVQTYLPK NDVIEKFEAK
1301: LGYVFLMKGL LLEALTHPSL QESAERYSYQ RLEFLGDAVL DILLTRHLFH SHKDTDEGEL TDLRSASVNN ENFARLAVKH KFYQCLQHSS GKLPDNITEY
1401: VNSLENPSMD KINSLSDAAL RGPKVLGDIV ESIAGAILID RKLDLEVVWG IFKPLLSPIV TPEKLELPPF RELLEWCSEN GYFIGIKCTD GDKIEATMDV
1501: QLKETLLIRR SCGKSKKDAK AHAASMLLKD LEEQGLLVPK NASNKQQFQD HRNIFDAMDI QLSTPIRRKK SAGSKIADSL DKPVDWAVRM SKGGPRAALH
1601: EFCKMLQWPR PIFDSAEVEQ SVPTPQGQGF SFVSTIKLHI PNSDVISLRG DGFADKKSAM DSAALLMLYE LQRRGRLQVQ EIHVQ
0001: MHSSLEPEKM EEGGGSNSLK RKFSEIDGDQ NLDSVSSPMM TDSNGSYELK VYEVAKNRNI IAVLGTGIDK SEITKRLIKA MGSSDTDKRL IIFLAPTVNL
0101: VKQQCCEIRA LVNLKVEEYF GAKGVDKWTS QRWDEEFSKH DVLVMTPQIL LDVLRSAFLK LEMVCLLIID ECHHTTGNHP YAKLMKEFYH ESTSKPKIFG
0201: LTASAVIRKG IVSSPSNYAA QVSELERLMD SKIFNPEERE GVEKFATTVK EGPILYNPSP SCSLELKEKL ETSHLKFDAS LRRLQELGKD SFLNMDNKFE
0301: TYQKRLSIDY REILHCLDNL GLICAHLAAE VCLEKISDTK EESETYKECS MVCKEFLEDI LSTIGVYLPQ DDKSLVDLQQ NHLSAVISGH VSPKLKELFH
0401: LLDSFRGDKQ KQCLILVERI ITAKVIERFV KKEASLAYLN VLYLTENNPS TNVSAQKMQI EIPDLFQHGK VNLLFITDVV EEGFQVPDCS CMVCFDLPKT
0501: MCSYSQSQKH AKQSNSKSIM FLERGNPKQR DHLHDLMRRE VLIQDPEAPN LKSCPPPVKN GHGVKEIGSM VIPDSNITVS EEAASTQTMS DPPSRNEQLP
0601: PCKKLRLDNN LLQSNGKEKV ASSKSKSSSS AAGSKKRKEL HGTTCANALS GTWGENIDGA TFQAYKFDFC CNISGEVYSS FSLLLESTLA EDVGKVEMDL
0701: YLVRKLVKAS VSPCGQIRLS QEELVKAKYF QQFFFNGMFG KLFVGSKSQG TKREFLLQTD TSSLWHPAFM FLLLPVETND LASSATIDWS AINSCASIVE
0801: FLKKNSLLDL RDSDGNQCNT SSGQEVLLDD KMEETNLIHF ANASSDKNSL EELVVIAIHT GRIYSIVEAV SDSSAMSPFE VDASSGYATY AEYFNKKYGI
0901: VLAHPNQPLM KLKQSHHAHN LLVDFNEEMV VKTEPKAGNV RKRKPNIHAH LPPELLARID VPRAVLKSIY LLPSVMHRLE SLMLASQLRE EIDCSIDNFS
1001: ISSTSILEAV TTLTCPESFS MERLELLGDS VLKYVASCHL FLKYPDKDEG QLSRQRQSII SNSNLHRLTT SRKLQGYIRN GAFEPRRWTA PGQFSLFPVP
1101: CKCGIDTREV PLDPKFFTEN MTIKIGKSCD MGHRWVVSKS VSDCAEALIG AYYVSGGLSA SLHMMKWLGI DVDFDPNLVV EAINRVSLRC YIPKEDELIE
1201: LERKIQHEFS AKFLLKEAIT HSSLRESYSY ERLEFLGDSV LDFLITRHLF NTYEQTGPGE MTDLRSACVN NENFAQVAVK NNLHTHLQRC ATVLETQIND
1301: YLMSFQKPDE TGRSIPSIQG PKALGDVVES IAGALLIDTR LDLDQVWRVF EPLLSPLVTP DKLQLPPYRE LNELCDSLGY FFRVKCSNDG VKAQATIQLQ
1401: LDDVLLTGDG SEQTNKLALG KAASHLLTQL EKRNISRKTS LGDNQSSMDV NLACNHSDRE TLTSETTEIQ SIVIPFIGPI NMKKGGPRGT LHEFCKKHLW
1501: PMPTFDTSEE KSRTPFEFID GGEKRTSFSS FTSTITLRIP NREAVMYAGE ARPDKKSSFD SAVVELLYEL ERRKIVIIQK
0101: VKQQCCEIRA LVNLKVEEYF GAKGVDKWTS QRWDEEFSKH DVLVMTPQIL LDVLRSAFLK LEMVCLLIID ECHHTTGNHP YAKLMKEFYH ESTSKPKIFG
0201: LTASAVIRKG IVSSPSNYAA QVSELERLMD SKIFNPEERE GVEKFATTVK EGPILYNPSP SCSLELKEKL ETSHLKFDAS LRRLQELGKD SFLNMDNKFE
0301: TYQKRLSIDY REILHCLDNL GLICAHLAAE VCLEKISDTK EESETYKECS MVCKEFLEDI LSTIGVYLPQ DDKSLVDLQQ NHLSAVISGH VSPKLKELFH
0401: LLDSFRGDKQ KQCLILVERI ITAKVIERFV KKEASLAYLN VLYLTENNPS TNVSAQKMQI EIPDLFQHGK VNLLFITDVV EEGFQVPDCS CMVCFDLPKT
0501: MCSYSQSQKH AKQSNSKSIM FLERGNPKQR DHLHDLMRRE VLIQDPEAPN LKSCPPPVKN GHGVKEIGSM VIPDSNITVS EEAASTQTMS DPPSRNEQLP
0601: PCKKLRLDNN LLQSNGKEKV ASSKSKSSSS AAGSKKRKEL HGTTCANALS GTWGENIDGA TFQAYKFDFC CNISGEVYSS FSLLLESTLA EDVGKVEMDL
0701: YLVRKLVKAS VSPCGQIRLS QEELVKAKYF QQFFFNGMFG KLFVGSKSQG TKREFLLQTD TSSLWHPAFM FLLLPVETND LASSATIDWS AINSCASIVE
0801: FLKKNSLLDL RDSDGNQCNT SSGQEVLLDD KMEETNLIHF ANASSDKNSL EELVVIAIHT GRIYSIVEAV SDSSAMSPFE VDASSGYATY AEYFNKKYGI
0901: VLAHPNQPLM KLKQSHHAHN LLVDFNEEMV VKTEPKAGNV RKRKPNIHAH LPPELLARID VPRAVLKSIY LLPSVMHRLE SLMLASQLRE EIDCSIDNFS
1001: ISSTSILEAV TTLTCPESFS MERLELLGDS VLKYVASCHL FLKYPDKDEG QLSRQRQSII SNSNLHRLTT SRKLQGYIRN GAFEPRRWTA PGQFSLFPVP
1101: CKCGIDTREV PLDPKFFTEN MTIKIGKSCD MGHRWVVSKS VSDCAEALIG AYYVSGGLSA SLHMMKWLGI DVDFDPNLVV EAINRVSLRC YIPKEDELIE
1201: LERKIQHEFS AKFLLKEAIT HSSLRESYSY ERLEFLGDSV LDFLITRHLF NTYEQTGPGE MTDLRSACVN NENFAQVAVK NNLHTHLQRC ATVLETQIND
1301: YLMSFQKPDE TGRSIPSIQG PKALGDVVES IAGALLIDTR LDLDQVWRVF EPLLSPLVTP DKLQLPPYRE LNELCDSLGY FFRVKCSNDG VKAQATIQLQ
1401: LDDVLLTGDG SEQTNKLALG KAASHLLTQL EKRNISRKTS LGDNQSSMDV NLACNHSDRE TLTSETTEIQ SIVIPFIGPI NMKKGGPRGT LHEFCKKHLW
1501: PMPTFDTSEE KSRTPFEFID GGEKRTSFSS FTSTITLRIP NREAVMYAGE ARPDKKSSFD SAVVELLYEL ERRKIVIIQK
Arabidopsis Description
DCL3Endoribonuclease Dicer homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXW7]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.