Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG40313 | Sorghum | cytosol, nucleus, plastid | 89.59 | 87.45 |
| Zm00001d027412_P004 | Maize | cytosol, nucleus, plastid | 88.9 | 86.69 |
| TraesCS5A01G516000.1 | Wheat | cytosol, nucleus, plastid | 87.31 | 83.37 |
| TraesCS4B01G347300.1 | Wheat | cytosol, nucleus, plastid | 87.1 | 82.79 |
| HORVU4Hr1G084890.7 | Barley | cytosol, nucleus, plastid | 87.47 | 82.47 |
| TraesCS4D01G342300.1 | Wheat | mitochondrion | 87.25 | 81.18 |
| GSMUA_Achr8P12350_001 | Banana | nucleus | 71.75 | 74.31 |
| KRG97266 | Soybean | cytosol, nucleus, plastid | 73.82 | 71.47 |
| KRH68982 | Soybean | cytosol, nucleus, plastid | 73.45 | 71.03 |
| CDY15207 | Canola | nucleus | 68.14 | 70.92 |
| CDX90002 | Canola | nucleus | 68.14 | 70.81 |
| VIT_15s0048g02380.t01 | Wine grape | cytosol, nucleus, plastid | 72.81 | 70.38 |
| Bra033293.1-P | Field mustard | cytosol, nucleus, plastid | 68.14 | 69.5 |
| AT1G01040.2 | Thale cress | nucleus | 69.99 | 69.01 |
| Solyc10g005130.2.1 | Tomato | nucleus | 68.19 | 68.01 |
| PGSC0003DMT400029301 | Potato | nucleus | 69.09 | 67.97 |
| Os06t0358800-01 | Rice | cytosol | 5.79 | 36.45 |
| Os05t0271300-00 | Rice | cytosol, nucleus, plastid | 5.63 | 33.44 |
| Os09t0315050-00 | Rice | cytosol, extracellular, nucleus | 2.34 | 30.77 |
| Os01t0909200-01 | Rice | cytosol | 26.18 | 29.86 |
| Os03t0583900-01 | Rice | nucleus | 22.2 | 29.65 |
| Os10t0485600-01 | Rice | cytosol, plastid | 25.54 | 29.38 |
| Os04t0509300-02 | Rice | cytosol | 24.48 | 27.82 |
| Os01t0551100-01 | Rice | cytosol | 3.66 | 26.95 |
Protein Annotations
| Gene3D:1.10.1520.10 | MapMan:16.10.2.1.1 | Gene3D:2.170.260.10 | Gene3D:3.30.160.20 | Gene3D:3.30.160.380 | Gene3D:3.40.50.300 |
| ProteinID:AAM52322.1 | ProteinID:ABF93701.1 | EMBL:AP014959 | ProteinID:BAF10710.2 | InterPro:Dicer_dimer_sf | InterPro:Dicer_dimerisation_dom |
| ProteinID:EAZ25399.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004386 | GO:GO:0004518 | GO:GO:0004519 | GO:GO:0004525 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0006139 | GO:GO:0006396 | GO:GO:0006412 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016442 | GO:GO:0016787 | GO:GO:0016891 | GO:GO:0019538 |
| GO:GO:0030422 | GO:GO:0031047 | GO:GO:0035196 | GO:GO:0040029 | GO:GO:0046872 | GO:GO:0090305 |
| GO:GO:0090501 | GO:GO:0090502 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR000999 | InterPro:IPR001650 |
| InterPro:IPR003100 | InterPro:IPR005034 | InterPro:IPR014001 | InterPro:IPR014720 | InterPro:IPR036389 | InterPro:IPR038248 |
| EnsemblPlantsGene:Os03g0121800 | EnsemblPlants:Os03t0121800-01 | InterPro:P-loop_NTPase | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF00271 |
| PFAM:PF00636 | PFAM:PF02170 | PFAM:PF03368 | PFAM:PF14709 | ScanProsite:PS00517 | PFscan:PS50137 |
| PFscan:PS50142 | PFscan:PS50821 | PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51327 | PANTHER:PTHR14950 |
| PANTHER:PTHR14950:SF44 | UniProt:Q8LMR2 | InterPro:RNase_III_dom | InterPro:RNase_III_sf | SMART:SM00358 | SMART:SM00487 |
| SMART:SM00490 | SMART:SM00535 | SMART:SM00949 | SUPFAM:SSF101690 | SUPFAM:SSF52540 | SUPFAM:SSF54768 |
| SUPFAM:SSF69065 | UniParc:UPI00000AAFE6 | InterPro:dsRBD_dom | SEG:seg | : | : |
Description
DICER-LIKE 1Dicer-like protein, miRNA biogenesis, Reguration of development (Os03t0121800-01)
Coordinates
chr3:-:1195075..1204839
Molecular Weight (calculated)
210214.0 Da
IEP (calculated)
6.640
GRAVY (calculated)
-0.370
Length
1883 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGGGGVGGG AGEHAAAAYW YDACEDGASL LCGIDFAASA DFDPGLIPAM DTGADDGFVA EIDRILESIN AESSPAPPPP PPPPLPEPVP VAPPELPIQE
0101: KQLQVASAPV ANNAVAVVGV VQRSKGVVAR KEPRRESHGC AANGGGGGEW RDGKRPRLAS GGVGGPRQEW RRRPMLPPPP SRGWDDRRGR RDFDRVRKHE
0201: HHRREARGFW ERDRGGKMVF RSGTWEQESD REAKRARTQD GGSMEKKAEA DRMGAAQREK PVAEERARQY QLEVLEQAKS RNTIAFLETG AGKTLIAVLL
0301: IKSVCDKMLK ENKKMLAVFL VPKVPLVYQV LVMTAQILLN ILRHSIIKMD AIHLLILDEC HHAVKKHPYS LVMSEFYHTT PKEKRPAVFG MTASPVNLKG
0401: VTSQEDCAIK IRNLESKLDS VVCTIKDRKE LEKHVPMPLE VVVQYDKAAT LWSLHEQIKQ MESTVEEAAL SSSKRTKWQF MGARDAGSRD ELRLVYGVSE
0501: RTESDGAANL IQKLRAINYA LGELGQWCAY KVAQSFLTAL QNDERANYQV DVKFQESYLK KVVDLLHCQL TEGAAMKSET SDVEMQNTEK HNTNDLEEGE
0601: LPDSHGEHVD EVIGAAVADG KVTPRVQALI KILLKYQHTE DFRAIIFVER VVTALVLPKV LAELPSLSFI RCASLIGHNN NQEMRACQMQ DTISKFRDGR
0701: VTLLVATSVA EEGLDIRQCN VVIRFDLAKT VLAYIQSRGR ARKPGSDYIL MLERGNISHE TFLRNARNSE ETLRKEAMER TDLSHLDGTS VLSPVDTSPG
0801: SMYQVESTGA VVSLNSAVGL IHFYCSQLPS DRYSILHPEF IMQKYEKPGG SVEYSCKLQL PCNAPFEKLE GPICSSIRLA QQAVCLAACK KLHEMGAFTD
0901: TLLPDRGSGE GEKTEQNDEG EPLPGTARHR EFYPEGVADI LRGEWILSGR DGYQNSQFIK LYMYSVNCVN VGTSKDPFVT QLSNFAIIFG NELDAEVLST
1001: TMDLFVARTM ITKASLVFRG RIEITESQLV LLKSFHVRLM SIVLDVDVDP STTPWDPAKA YLFVPVGAEK CTDPLREIDW TLVNNIVNTD AWNNPLQRAR
1101: PDVYLGTNER TLGGDRREYG FGKLRHGTAF GQKAHPTYGI RGAIAEFDIV KASGLVPARD RGHFSDYQNQ GKLFMADSCW NAKDLAGMVV TAAHSGKRFY
1201: VDCICYNMNA ENSFPRKEGY LGPLEYSSYA DYYKQKYGVE LIYRKQPLIR ARGVSYCKNL LSPRFEHSDA REGDFSENLD KTYYVYLPPE LCLVHPLPGS
1301: LVRGAQRLPS IMRRVESMLL AVQLKDIIDY PVPATKILEA LTAASCQETL CYERAELLGD AYLKWVVSRF LFLKYPQKHE GQLTRMRQQM VSNMVLYQYA
1401: LNKTLQSYIQ ADRFAPSRWA APGVLPVFDE ESREYEPSIF DEESTGCELQ KESYDDYADN MQEDGEIEGD SSCYRVLSSK TLADVVEALI GVYYVAGGKI
1501: AANHLMKWIG IHAELDPEEI PPPKPYDIPE SIMRSINFDT LKGVLGIEFQ NKGLLVEAIT HASRPSSGVS CYQRLEFVGD AVLDHLITRH LFFTYTDLPP
1601: GRLTDLRAAA VNNENFARVA VKHKLHVHLR HGSSALETQI REFVKDVQEE LLKPGFNSFG LGDCKAPKVL GDIVESIAGA IFLDSGYDTS VVWKVFQPLL
1701: HPMVTPETLP MHPVRELQER CQQQAEGLEY KASRAGNIAT VEVFVDGVQI GVAQNPQKKM AQKLAARNAL VVLKEKETAT KKEDERDGEK KNGAQMFTRQ
1801: TLNDICLRRQ WPMPQYRCVN EGGPAHAKRF VYSVRVNTSD RGWTDECIGE PMPSVKKAKD SAAVLLLELL NRDFPDKPDG KQP
0101: KQLQVASAPV ANNAVAVVGV VQRSKGVVAR KEPRRESHGC AANGGGGGEW RDGKRPRLAS GGVGGPRQEW RRRPMLPPPP SRGWDDRRGR RDFDRVRKHE
0201: HHRREARGFW ERDRGGKMVF RSGTWEQESD REAKRARTQD GGSMEKKAEA DRMGAAQREK PVAEERARQY QLEVLEQAKS RNTIAFLETG AGKTLIAVLL
0301: IKSVCDKMLK ENKKMLAVFL VPKVPLVYQV LVMTAQILLN ILRHSIIKMD AIHLLILDEC HHAVKKHPYS LVMSEFYHTT PKEKRPAVFG MTASPVNLKG
0401: VTSQEDCAIK IRNLESKLDS VVCTIKDRKE LEKHVPMPLE VVVQYDKAAT LWSLHEQIKQ MESTVEEAAL SSSKRTKWQF MGARDAGSRD ELRLVYGVSE
0501: RTESDGAANL IQKLRAINYA LGELGQWCAY KVAQSFLTAL QNDERANYQV DVKFQESYLK KVVDLLHCQL TEGAAMKSET SDVEMQNTEK HNTNDLEEGE
0601: LPDSHGEHVD EVIGAAVADG KVTPRVQALI KILLKYQHTE DFRAIIFVER VVTALVLPKV LAELPSLSFI RCASLIGHNN NQEMRACQMQ DTISKFRDGR
0701: VTLLVATSVA EEGLDIRQCN VVIRFDLAKT VLAYIQSRGR ARKPGSDYIL MLERGNISHE TFLRNARNSE ETLRKEAMER TDLSHLDGTS VLSPVDTSPG
0801: SMYQVESTGA VVSLNSAVGL IHFYCSQLPS DRYSILHPEF IMQKYEKPGG SVEYSCKLQL PCNAPFEKLE GPICSSIRLA QQAVCLAACK KLHEMGAFTD
0901: TLLPDRGSGE GEKTEQNDEG EPLPGTARHR EFYPEGVADI LRGEWILSGR DGYQNSQFIK LYMYSVNCVN VGTSKDPFVT QLSNFAIIFG NELDAEVLST
1001: TMDLFVARTM ITKASLVFRG RIEITESQLV LLKSFHVRLM SIVLDVDVDP STTPWDPAKA YLFVPVGAEK CTDPLREIDW TLVNNIVNTD AWNNPLQRAR
1101: PDVYLGTNER TLGGDRREYG FGKLRHGTAF GQKAHPTYGI RGAIAEFDIV KASGLVPARD RGHFSDYQNQ GKLFMADSCW NAKDLAGMVV TAAHSGKRFY
1201: VDCICYNMNA ENSFPRKEGY LGPLEYSSYA DYYKQKYGVE LIYRKQPLIR ARGVSYCKNL LSPRFEHSDA REGDFSENLD KTYYVYLPPE LCLVHPLPGS
1301: LVRGAQRLPS IMRRVESMLL AVQLKDIIDY PVPATKILEA LTAASCQETL CYERAELLGD AYLKWVVSRF LFLKYPQKHE GQLTRMRQQM VSNMVLYQYA
1401: LNKTLQSYIQ ADRFAPSRWA APGVLPVFDE ESREYEPSIF DEESTGCELQ KESYDDYADN MQEDGEIEGD SSCYRVLSSK TLADVVEALI GVYYVAGGKI
1501: AANHLMKWIG IHAELDPEEI PPPKPYDIPE SIMRSINFDT LKGVLGIEFQ NKGLLVEAIT HASRPSSGVS CYQRLEFVGD AVLDHLITRH LFFTYTDLPP
1601: GRLTDLRAAA VNNENFARVA VKHKLHVHLR HGSSALETQI REFVKDVQEE LLKPGFNSFG LGDCKAPKVL GDIVESIAGA IFLDSGYDTS VVWKVFQPLL
1701: HPMVTPETLP MHPVRELQER CQQQAEGLEY KASRAGNIAT VEVFVDGVQI GVAQNPQKKM AQKLAARNAL VVLKEKETAT KKEDERDGEK KNGAQMFTRQ
1801: TLNDICLRRQ WPMPQYRCVN EGGPAHAKRF VYSVRVNTSD RGWTDECIGE PMPSVKKAKD SAAVLLLELL NRDFPDKPDG KQP
0001: MVMEDEPREA TIKPSYWLDA CEDISCDLID DLVSEFDPSS VAVNESTDEN GVINDFFGGI DHILDSIKNG GGLPNNGVSD TNSQINEVTV TPQVIAKETV
0101: KENGLQKNGG KRDEFSKEEG DKDRKRARVC SYQSERSNLS GRGHVNNSRE GDRFMNRKRT RNWDEAGNNK KKRECNNYRR DGRDREVRGY WERDKVGSNE
0201: LVYRSGTWEA DHERDVKKVS GGNRECDVKA EENKSKPEER KEKVVEEQAR RYQLDVLEQA KAKNTIAFLE TGAGKTLIAI LLIKSVHKDL MSQNRKMLSV
0301: FLVPKVPLVY QQAEVIRNQT CFQVGHYCGE MGQDFWDSRR WQREFESKQV LVMTAQILLN ILRHSIIRME TIDLLILDEC HHAVKKHPYS LVMSEFYHTT
0401: PKDKRPAIFG MTASPVNLKG VSSQVDCAIK IRNLETKLDS TVCTIKDRKE LEKHVPMPSE IVVEYDKAAT MWSLHETIKQ MIAAVEEAAQ ASSRKSKWQF
0501: MGARDAGAKD ELRQVYGVSE RTESDGAANL IHKLRAINYT LAELGQWCAY KVGQSFLSAL QSDERVNFQV DVKFQESYLS EVVSLLQCEL LEGAAAEKVA
0601: AEVGKPENGN AHDEMEEGEL PDDPVVSGGE HVDEVIGAAV ADGKVTPKVQ SLIKLLLKYQ HTADFRAIVF VERVVAALVL PKVFAELPSL SFIRCASMIG
0701: HNNSQEMKSS QMQDTISKFR DGHVTLLVAT SVAEEGLDIR QCNVVMRFDL AKTVLAYIQS RGRARKPGSD YILMVERGNV SHAAFLRNAR NSEETLRKEA
0801: IERTDLSHLK DTSRLISIDA VPGTVYKVEA TGAMVSLNSA VGLVHFYCSQ LPGDRYAILR PEFSMEKHEK PGGHTEYSCR LQLPCNAPFE ILEGPVCSSM
0901: RLAQQAVCLA ACKKLHEMGA FTDMLLPDKG SGQDAEKADQ DDEGEPVPGT ARHREFYPEG VADVLKGEWV SSGKEVCESS KLFHLYMYNV RCVDFGSSKD
1001: PFLSEVSEFA ILFGNELDAE VLSMSMDLYV ARAMITKASL AFKGSLDITE NQLSSLKKFH VRLMSIVLDV DVEPSTTPWD PAKAYLFVPV TDNTSMEPIK
1101: GINWELVEKI TKTTAWDNPL QRARPDVYLG TNERTLGGDR REYGFGKLRH NIVFGQKSHP TYGIRGAVAS FDVVRASGLL PVRDAFEKEV EEDLSKGKLM
1201: MADGCMVAED LIGKIVTAAH SGKRFYVDSI CYDMSAETSF PRKEGYLGPL EYNTYADYYK QKYGVDLNCK QQPLIKGRGV SYCKNLLSPR FEQSGESETV
1301: LDKTYYVFLP PELCVVHPLS GSLIRGAQRL PSIMRRVESM LLAVQLKNLI SYPIPTSKIL EALTAASCQE TFCYERAELL GDAYLKWVVS RFLFLKYPQK
1401: HEGQLTRMRQ QMVSNMVLYQ FALVKGLQSY IQADRFAPSR WSAPGVPPVF DEDTKDGGSS FFDEEQKPVS EENSDVFEDG EMEDGELEGD LSSYRVLSSK
1501: TLADVVEALI GVYYVEGGKI AANHLMKWIG IHVEDDPDEV DGTLKNVNVP ESVLKSIDFV GLERALKYEF KEKGLLVEAI THASRPSSGV SCYQRLEFVG
1601: DAVLDHLITR HLFFTYTSLP PGRLTDLRAA AVNNENFARV AVKHKLHLYL RHGSSALEKQ IREFVKEVQT ESSKPGFNSF GLGDCKAPKV LGDIVESIAG
1701: AIFLDSGKDT TAAWKVFQPL LQPMVTPETL PMHPVRELQE RCQQQAEGLE YKASRSGNTA TVEVFIDGVQ VGVAQNPQKK MAQKLAARNA LAALKEKEIA
1801: ESKEKHINNG NAGEDQGENE NGNKKNGHQP FTRQTLNDIC LRKNWPMPSY RCVKEGGPAH AKRFTFGVRV NTSDRGWTDE CIGEPMPSVK KAKDSAAVLL
1901: LELLNKTFS
0101: KENGLQKNGG KRDEFSKEEG DKDRKRARVC SYQSERSNLS GRGHVNNSRE GDRFMNRKRT RNWDEAGNNK KKRECNNYRR DGRDREVRGY WERDKVGSNE
0201: LVYRSGTWEA DHERDVKKVS GGNRECDVKA EENKSKPEER KEKVVEEQAR RYQLDVLEQA KAKNTIAFLE TGAGKTLIAI LLIKSVHKDL MSQNRKMLSV
0301: FLVPKVPLVY QQAEVIRNQT CFQVGHYCGE MGQDFWDSRR WQREFESKQV LVMTAQILLN ILRHSIIRME TIDLLILDEC HHAVKKHPYS LVMSEFYHTT
0401: PKDKRPAIFG MTASPVNLKG VSSQVDCAIK IRNLETKLDS TVCTIKDRKE LEKHVPMPSE IVVEYDKAAT MWSLHETIKQ MIAAVEEAAQ ASSRKSKWQF
0501: MGARDAGAKD ELRQVYGVSE RTESDGAANL IHKLRAINYT LAELGQWCAY KVGQSFLSAL QSDERVNFQV DVKFQESYLS EVVSLLQCEL LEGAAAEKVA
0601: AEVGKPENGN AHDEMEEGEL PDDPVVSGGE HVDEVIGAAV ADGKVTPKVQ SLIKLLLKYQ HTADFRAIVF VERVVAALVL PKVFAELPSL SFIRCASMIG
0701: HNNSQEMKSS QMQDTISKFR DGHVTLLVAT SVAEEGLDIR QCNVVMRFDL AKTVLAYIQS RGRARKPGSD YILMVERGNV SHAAFLRNAR NSEETLRKEA
0801: IERTDLSHLK DTSRLISIDA VPGTVYKVEA TGAMVSLNSA VGLVHFYCSQ LPGDRYAILR PEFSMEKHEK PGGHTEYSCR LQLPCNAPFE ILEGPVCSSM
0901: RLAQQAVCLA ACKKLHEMGA FTDMLLPDKG SGQDAEKADQ DDEGEPVPGT ARHREFYPEG VADVLKGEWV SSGKEVCESS KLFHLYMYNV RCVDFGSSKD
1001: PFLSEVSEFA ILFGNELDAE VLSMSMDLYV ARAMITKASL AFKGSLDITE NQLSSLKKFH VRLMSIVLDV DVEPSTTPWD PAKAYLFVPV TDNTSMEPIK
1101: GINWELVEKI TKTTAWDNPL QRARPDVYLG TNERTLGGDR REYGFGKLRH NIVFGQKSHP TYGIRGAVAS FDVVRASGLL PVRDAFEKEV EEDLSKGKLM
1201: MADGCMVAED LIGKIVTAAH SGKRFYVDSI CYDMSAETSF PRKEGYLGPL EYNTYADYYK QKYGVDLNCK QQPLIKGRGV SYCKNLLSPR FEQSGESETV
1301: LDKTYYVFLP PELCVVHPLS GSLIRGAQRL PSIMRRVESM LLAVQLKNLI SYPIPTSKIL EALTAASCQE TFCYERAELL GDAYLKWVVS RFLFLKYPQK
1401: HEGQLTRMRQ QMVSNMVLYQ FALVKGLQSY IQADRFAPSR WSAPGVPPVF DEDTKDGGSS FFDEEQKPVS EENSDVFEDG EMEDGELEGD LSSYRVLSSK
1501: TLADVVEALI GVYYVEGGKI AANHLMKWIG IHVEDDPDEV DGTLKNVNVP ESVLKSIDFV GLERALKYEF KEKGLLVEAI THASRPSSGV SCYQRLEFVG
1601: DAVLDHLITR HLFFTYTSLP PGRLTDLRAA AVNNENFARV AVKHKLHLYL RHGSSALEKQ IREFVKEVQT ESSKPGFNSF GLGDCKAPKV LGDIVESIAG
1701: AIFLDSGKDT TAAWKVFQPL LQPMVTPETL PMHPVRELQE RCQQQAEGLE YKASRSGNTA TVEVFIDGVQ VGVAQNPQKK MAQKLAARNA LAALKEKEIA
1801: ESKEKHINNG NAGEDQGENE NGNKKNGHQP FTRQTLNDIC LRKNWPMPSY RCVKEGGPAH AKRFTFGVRV NTSDRGWTDE CIGEPMPSVK KAKDSAAVLL
1901: LELLNKTFS
Arabidopsis Description
DCL1Dicer-like 1 [Source:UniProtKB/TrEMBL;Acc:F4HQG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.