Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG97266 | Soybean | cytosol, nucleus, plastid | 96.15 | 96.25 |
| VIT_15s0048g02380.t01 | Wine grape | cytosol, nucleus, plastid | 80.23 | 80.18 |
| Bra033293.1-P | Field mustard | cytosol, nucleus, plastid | 73.14 | 77.14 |
| CDX90002 | Canola | nucleus | 71.6 | 76.93 |
| CDY15207 | Canola | nucleus | 71.39 | 76.84 |
| AT1G01040.2 | Thale cress | nucleus | 74.78 | 76.23 |
| Solyc10g005130.2.1 | Tomato | nucleus | 72.57 | 74.84 |
| PGSC0003DMT400029301 | Potato | nucleus | 73.45 | 74.71 |
| GSMUA_Achr8P12350_001 | Banana | nucleus | 69.29 | 74.2 |
| KXG40313 | Sorghum | cytosol, nucleus, plastid | 73.24 | 73.92 |
| Zm00001d027412_P004 | Maize | cytosol, nucleus, plastid | 72.98 | 73.59 |
| Os03t0121800-01 | Rice | cytosol, nucleus, plasma membrane | 71.03 | 73.45 |
| TraesCS5A01G516000.1 | Wheat | cytosol, nucleus, plastid | 71.55 | 70.64 |
| TraesCS4B01G347300.1 | Wheat | cytosol, nucleus, plastid | 71.65 | 70.42 |
| HORVU4Hr1G084890.7 | Barley | cytosol, nucleus, plastid | 71.34 | 69.55 |
| TraesCS4D01G342300.1 | Wheat | mitochondrion | 71.44 | 68.73 |
| KRH11802 | Soybean | cytosol | 6.16 | 42.11 |
| KRH14361 | Soybean | cytosol | 6.01 | 33.91 |
| KRH36818 | Soybean | cytosol, nucleus, plastid | 23.57 | 32.46 |
| KRH36816 | Soybean | cytosol | 23.11 | 31.67 |
| KRH61605 | Soybean | nucleus | 26.91 | 31.3 |
| KRH52276 | Soybean | cytosol | 7.96 | 30.82 |
| KRH20103 | Soybean | nucleus | 23.88 | 28.41 |
| KRH03544 | Soybean | nucleus | 23.63 | 28.12 |
| KRG97157 | Soybean | cytosol, nucleus, plasma membrane | 10.48 | 25.89 |
Protein Annotations
| Gene3D:1.10.1520.10 | EntrezGene:100780953 | MapMan:16.10.2.1.1 | Gene3D:2.170.260.10 | Gene3D:3.30.160.20 | Gene3D:3.30.160.380 |
| EMBL:ACUP02002128 | InterPro:Dicer_dimer_sf | InterPro:Dicer_dimerisation_dom | EnsemblPlantsGene:GLYMA_03G262100 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004525 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016442 | GO:GO:0016787 | GO:GO:0016891 | GO:GO:0030422 | GO:GO:0031047 |
| GO:GO:0040029 | GO:GO:0090501 | GO:GO:0090502 | InterPro:Helicase/UvrB_N | InterPro:Helicase_ATP-bd | InterPro:Helicase_C |
| InterPro:IPR000999 | InterPro:IPR001650 | InterPro:IPR003100 | InterPro:IPR005034 | InterPro:IPR014001 | InterPro:IPR014720 |
| InterPro:IPR036389 | InterPro:IPR038248 | UniProt:K7KH72 | EnsemblPlants:KRH68982 | ProteinID:KRH68982 | ProteinID:KRH68982.1 |
| ProteinID:KRH68983.1 | ProteinID:KRH68984.1 | InterPro:P-loop_NTPase | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF00271 |
| PFAM:PF00636 | PFAM:PF02170 | PFAM:PF03368 | PFAM:PF04851 | PFAM:PF14709 | ScanProsite:PS00517 |
| PFscan:PS50137 | PFscan:PS50142 | PFscan:PS50821 | PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51327 |
| PANTHER:PTHR14950 | PANTHER:PTHR14950:SF44 | InterPro:RNase_III_dom | InterPro:RNase_III_sf | SMART:SM00358 | SMART:SM00487 |
| SMART:SM00490 | SMART:SM00535 | SMART:SM00949 | SUPFAM:SSF101690 | SUPFAM:SSF52540 | SUPFAM:SSF54768 |
| SUPFAM:SSF69065 | UniParc:UPI0002965ADC | InterPro:dsRBD_dom | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr3:-:45520071..45532169
Molecular Weight (calculated)
218177.0 Da
IEP (calculated)
6.452
GRAVY (calculated)
-0.440
Length
1947 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEDGSRVPAG DDPSYWLDAC EDISCDDFID FDVSSIVSDQ PDNPSNQDFF GGIDKILDSI KNGAGLPLNH AVEPPNNNGT AAGEVCLPSN ATLEDGAPAA
0101: DAFDHSGGVA RSNGSSKLSN GNETGVLVNY SQERGAPPLN GGHDFDGEER CSKRAWLGGY NNERPYYCRG NYQGKERERC FNNNNRKRPR GDRDEIDRKD
0201: KDGGGRKREH YGAVARRDVR DRDCRDRETR GYWERDKSGS TDMIFRTGAW EPDHNRDDKM VIDTKLENYG KLDKKSEDAI ERVPEEKARQ YQLDVLEQSK
0301: RKNTIAFLET GAGKTLIAVL LIKSIQDSLQ KQNKKMLAVF LVPKVPLVYQ QAEVIRERTG YQVGHYCGEM GQDFWDARRW QREFDTKHVL VMTAQILLNI
0401: LRHSIIKMEA INLLILDECH HAVKKHPYSL VMSEFYHTTP KENRPSVFGM TASPVNLKGV SSQVDCAIKI RNLESKLDSI VCTIKDRKEL EKHVPMPSEV
0501: VVEYDKAASL CYLHEQIKQM EVEVEEAAKY SSRRSKWQFM GARDAGAKEE LRQVYGVSER TESDGAANLI QKLRAVNYAL GELGQWCAYK VALSFLAALQ
0601: NDERANYQLD VKFQETYLSK VVSLLKCQLS EGAASDKNAG IDDSENGAAQ SGSEHEEMEE GELPDSHVVS GGEHVDVIIG AAVADGKVTP KVQALIKILL
0701: KYQHTEDFRA IIFVERVVSA LVLPKVFAEL PSLSFVKCAS LIGHNNSQEM RTYQMQDTIA KFRDGRVTLL VATSVAEEGL DIRQCNVVIR FDLAKTVLAY
0801: IQSRGRARKP GSDYILMVER DNLSHEAFLR NAKNSEETLR KEAIERTDLS HLKDTSRLIS VDTRPGTVYQ VKSTGAVVSL NSAVGLIHFY CSQLPSDRYS
0901: ILRPEFIMER HEKPGGPTEY SCKLQLPCNA PFENLEGPIC SSMRLAQQAV CLAACKKLHE MGAFTDMLLP DKGSGGEREK DEQTDEGDPL PGTARHREFY
1001: PEGVADILKG EWILSEKDAC NNYKLLHLYM YAVKCENLGH SKDPFLTQVS NFAVLFGNEL DAEVLSMSMD LFIARTVTTK ASLVFSGLIN ITESQLASLK
1101: SFHVRLMSIV LDVDVEPSTT PWDPAKAYLF VPMVGDKSVD PMNQIDWHLV ETIIGADAWK NPLQKARPDV YLGTNERTLG GDRREYGFGK LRHGMAFGQK
1201: SHPTYGIRGA VAQFDVVKAS GLVPNRDAMQ TQKHINMTTN GKLMMADICT NAEDLVGRIV TAAHSGKRFY VDSICYDMSA ENSFPRKEGY LGPLEYSSYA
1301: DYYKQKYGVN LIYKQQPLIR GRGVSYCKNL LSPRFEHSEA HEGESEEIHD KTYYVFLPPE LCLVHPLPGS LVRGAQRLPS IMRRVESMLL AVQLKNMINY
1401: PVLASKILGA LTAASCQETF CYERAELLGD AYLKWVVSRF LFLKYPQKHE GQLTRMRQQM VSNMVLYQYA LSKGLQSYIQ ADRFAPSRWA APGVLPVFDE
1501: DTKDGESSLF DQERSISKIE RMDCHTNGYE DEMEDGELES DSSSYRVLSS KTLADVVEAL IGVYYVEGGK NAANHLMKWI GIQIEFDPDT MECTKKPFNV
1601: PDSILRSVDF DALEGALNMK FNDRGLLVES ITHASRPSSG VSCYQRLEFV GDAVLDHLIT RHLFFTYTNL PPGRLTDLRA AAVNNENFAR VAVKHNLHVH
1701: LRHGSSALEK QIKEFVKEVQ VELSKPGFNS FGLGDCKAPK VLGDIVESIA GAIFLDSGRD TTVVWKVFQP LLHPMVTPET LPMHPVRELQ ERCQQQAEGL
1801: EYKASRIGNL ATVEVFIDGV QVGAAQNPQK KMAQKLAARN ALAALKEKEV GKTQEKNDEN GKKNGNQTFT RQTLNDICLR RNWPMPFYRC VNEGGPAHAK
1901: RFTFAVRVNT TDRGWTDECV GEPMPSVKKA KDSAAVLLLE LLNKLYS
0101: DAFDHSGGVA RSNGSSKLSN GNETGVLVNY SQERGAPPLN GGHDFDGEER CSKRAWLGGY NNERPYYCRG NYQGKERERC FNNNNRKRPR GDRDEIDRKD
0201: KDGGGRKREH YGAVARRDVR DRDCRDRETR GYWERDKSGS TDMIFRTGAW EPDHNRDDKM VIDTKLENYG KLDKKSEDAI ERVPEEKARQ YQLDVLEQSK
0301: RKNTIAFLET GAGKTLIAVL LIKSIQDSLQ KQNKKMLAVF LVPKVPLVYQ QAEVIRERTG YQVGHYCGEM GQDFWDARRW QREFDTKHVL VMTAQILLNI
0401: LRHSIIKMEA INLLILDECH HAVKKHPYSL VMSEFYHTTP KENRPSVFGM TASPVNLKGV SSQVDCAIKI RNLESKLDSI VCTIKDRKEL EKHVPMPSEV
0501: VVEYDKAASL CYLHEQIKQM EVEVEEAAKY SSRRSKWQFM GARDAGAKEE LRQVYGVSER TESDGAANLI QKLRAVNYAL GELGQWCAYK VALSFLAALQ
0601: NDERANYQLD VKFQETYLSK VVSLLKCQLS EGAASDKNAG IDDSENGAAQ SGSEHEEMEE GELPDSHVVS GGEHVDVIIG AAVADGKVTP KVQALIKILL
0701: KYQHTEDFRA IIFVERVVSA LVLPKVFAEL PSLSFVKCAS LIGHNNSQEM RTYQMQDTIA KFRDGRVTLL VATSVAEEGL DIRQCNVVIR FDLAKTVLAY
0801: IQSRGRARKP GSDYILMVER DNLSHEAFLR NAKNSEETLR KEAIERTDLS HLKDTSRLIS VDTRPGTVYQ VKSTGAVVSL NSAVGLIHFY CSQLPSDRYS
0901: ILRPEFIMER HEKPGGPTEY SCKLQLPCNA PFENLEGPIC SSMRLAQQAV CLAACKKLHE MGAFTDMLLP DKGSGGEREK DEQTDEGDPL PGTARHREFY
1001: PEGVADILKG EWILSEKDAC NNYKLLHLYM YAVKCENLGH SKDPFLTQVS NFAVLFGNEL DAEVLSMSMD LFIARTVTTK ASLVFSGLIN ITESQLASLK
1101: SFHVRLMSIV LDVDVEPSTT PWDPAKAYLF VPMVGDKSVD PMNQIDWHLV ETIIGADAWK NPLQKARPDV YLGTNERTLG GDRREYGFGK LRHGMAFGQK
1201: SHPTYGIRGA VAQFDVVKAS GLVPNRDAMQ TQKHINMTTN GKLMMADICT NAEDLVGRIV TAAHSGKRFY VDSICYDMSA ENSFPRKEGY LGPLEYSSYA
1301: DYYKQKYGVN LIYKQQPLIR GRGVSYCKNL LSPRFEHSEA HEGESEEIHD KTYYVFLPPE LCLVHPLPGS LVRGAQRLPS IMRRVESMLL AVQLKNMINY
1401: PVLASKILGA LTAASCQETF CYERAELLGD AYLKWVVSRF LFLKYPQKHE GQLTRMRQQM VSNMVLYQYA LSKGLQSYIQ ADRFAPSRWA APGVLPVFDE
1501: DTKDGESSLF DQERSISKIE RMDCHTNGYE DEMEDGELES DSSSYRVLSS KTLADVVEAL IGVYYVEGGK NAANHLMKWI GIQIEFDPDT MECTKKPFNV
1601: PDSILRSVDF DALEGALNMK FNDRGLLVES ITHASRPSSG VSCYQRLEFV GDAVLDHLIT RHLFFTYTNL PPGRLTDLRA AAVNNENFAR VAVKHNLHVH
1701: LRHGSSALEK QIKEFVKEVQ VELSKPGFNS FGLGDCKAPK VLGDIVESIA GAIFLDSGRD TTVVWKVFQP LLHPMVTPET LPMHPVRELQ ERCQQQAEGL
1801: EYKASRIGNL ATVEVFIDGV QVGAAQNPQK KMAQKLAARN ALAALKEKEV GKTQEKNDEN GKKNGNQTFT RQTLNDICLR RNWPMPFYRC VNEGGPAHAK
1901: RFTFAVRVNT TDRGWTDECV GEPMPSVKKA KDSAAVLLLE LLNKLYS
0001: MVMEDEPREA TIKPSYWLDA CEDISCDLID DLVSEFDPSS VAVNESTDEN GVINDFFGGI DHILDSIKNG GGLPNNGVSD TNSQINEVTV TPQVIAKETV
0101: KENGLQKNGG KRDEFSKEEG DKDRKRARVC SYQSERSNLS GRGHVNNSRE GDRFMNRKRT RNWDEAGNNK KKRECNNYRR DGRDREVRGY WERDKVGSNE
0201: LVYRSGTWEA DHERDVKKVS GGNRECDVKA EENKSKPEER KEKVVEEQAR RYQLDVLEQA KAKNTIAFLE TGAGKTLIAI LLIKSVHKDL MSQNRKMLSV
0301: FLVPKVPLVY QQAEVIRNQT CFQVGHYCGE MGQDFWDSRR WQREFESKQV LVMTAQILLN ILRHSIIRME TIDLLILDEC HHAVKKHPYS LVMSEFYHTT
0401: PKDKRPAIFG MTASPVNLKG VSSQVDCAIK IRNLETKLDS TVCTIKDRKE LEKHVPMPSE IVVEYDKAAT MWSLHETIKQ MIAAVEEAAQ ASSRKSKWQF
0501: MGARDAGAKD ELRQVYGVSE RTESDGAANL IHKLRAINYT LAELGQWCAY KVGQSFLSAL QSDERVNFQV DVKFQESYLS EVVSLLQCEL LEGAAAEKVA
0601: AEVGKPENGN AHDEMEEGEL PDDPVVSGGE HVDEVIGAAV ADGKVTPKVQ SLIKLLLKYQ HTADFRAIVF VERVVAALVL PKVFAELPSL SFIRCASMIG
0701: HNNSQEMKSS QMQDTISKFR DGHVTLLVAT SVAEEGLDIR QCNVVMRFDL AKTVLAYIQS RGRARKPGSD YILMVERGNV SHAAFLRNAR NSEETLRKEA
0801: IERTDLSHLK DTSRLISIDA VPGTVYKVEA TGAMVSLNSA VGLVHFYCSQ LPGDRYAILR PEFSMEKHEK PGGHTEYSCR LQLPCNAPFE ILEGPVCSSM
0901: RLAQQAVCLA ACKKLHEMGA FTDMLLPDKG SGQDAEKADQ DDEGEPVPGT ARHREFYPEG VADVLKGEWV SSGKEVCESS KLFHLYMYNV RCVDFGSSKD
1001: PFLSEVSEFA ILFGNELDAE VLSMSMDLYV ARAMITKASL AFKGSLDITE NQLSSLKKFH VRLMSIVLDV DVEPSTTPWD PAKAYLFVPV TDNTSMEPIK
1101: GINWELVEKI TKTTAWDNPL QRARPDVYLG TNERTLGGDR REYGFGKLRH NIVFGQKSHP TYGIRGAVAS FDVVRASGLL PVRDAFEKEV EEDLSKGKLM
1201: MADGCMVAED LIGKIVTAAH SGKRFYVDSI CYDMSAETSF PRKEGYLGPL EYNTYADYYK QKYGVDLNCK QQPLIKGRGV SYCKNLLSPR FEQSGESETV
1301: LDKTYYVFLP PELCVVHPLS GSLIRGAQRL PSIMRRVESM LLAVQLKNLI SYPIPTSKIL EALTAASCQE TFCYERAELL GDAYLKWVVS RFLFLKYPQK
1401: HEGQLTRMRQ QMVSNMVLYQ FALVKGLQSY IQADRFAPSR WSAPGVPPVF DEDTKDGGSS FFDEEQKPVS EENSDVFEDG EMEDGELEGD LSSYRVLSSK
1501: TLADVVEALI GVYYVEGGKI AANHLMKWIG IHVEDDPDEV DGTLKNVNVP ESVLKSIDFV GLERALKYEF KEKGLLVEAI THASRPSSGV SCYQRLEFVG
1601: DAVLDHLITR HLFFTYTSLP PGRLTDLRAA AVNNENFARV AVKHKLHLYL RHGSSALEKQ IREFVKEVQT ESSKPGFNSF GLGDCKAPKV LGDIVESIAG
1701: AIFLDSGKDT TAAWKVFQPL LQPMVTPETL PMHPVRELQE RCQQQAEGLE YKASRSGNTA TVEVFIDGVQ VGVAQNPQKK MAQKLAARNA LAALKEKEIA
1801: ESKEKHINNG NAGEDQGENE NGNKKNGHQP FTRQTLNDIC LRKNWPMPSY RCVKEGGPAH AKRFTFGVRV NTSDRGWTDE CIGEPMPSVK KAKDSAAVLL
1901: LELLNKTFS
0101: KENGLQKNGG KRDEFSKEEG DKDRKRARVC SYQSERSNLS GRGHVNNSRE GDRFMNRKRT RNWDEAGNNK KKRECNNYRR DGRDREVRGY WERDKVGSNE
0201: LVYRSGTWEA DHERDVKKVS GGNRECDVKA EENKSKPEER KEKVVEEQAR RYQLDVLEQA KAKNTIAFLE TGAGKTLIAI LLIKSVHKDL MSQNRKMLSV
0301: FLVPKVPLVY QQAEVIRNQT CFQVGHYCGE MGQDFWDSRR WQREFESKQV LVMTAQILLN ILRHSIIRME TIDLLILDEC HHAVKKHPYS LVMSEFYHTT
0401: PKDKRPAIFG MTASPVNLKG VSSQVDCAIK IRNLETKLDS TVCTIKDRKE LEKHVPMPSE IVVEYDKAAT MWSLHETIKQ MIAAVEEAAQ ASSRKSKWQF
0501: MGARDAGAKD ELRQVYGVSE RTESDGAANL IHKLRAINYT LAELGQWCAY KVGQSFLSAL QSDERVNFQV DVKFQESYLS EVVSLLQCEL LEGAAAEKVA
0601: AEVGKPENGN AHDEMEEGEL PDDPVVSGGE HVDEVIGAAV ADGKVTPKVQ SLIKLLLKYQ HTADFRAIVF VERVVAALVL PKVFAELPSL SFIRCASMIG
0701: HNNSQEMKSS QMQDTISKFR DGHVTLLVAT SVAEEGLDIR QCNVVMRFDL AKTVLAYIQS RGRARKPGSD YILMVERGNV SHAAFLRNAR NSEETLRKEA
0801: IERTDLSHLK DTSRLISIDA VPGTVYKVEA TGAMVSLNSA VGLVHFYCSQ LPGDRYAILR PEFSMEKHEK PGGHTEYSCR LQLPCNAPFE ILEGPVCSSM
0901: RLAQQAVCLA ACKKLHEMGA FTDMLLPDKG SGQDAEKADQ DDEGEPVPGT ARHREFYPEG VADVLKGEWV SSGKEVCESS KLFHLYMYNV RCVDFGSSKD
1001: PFLSEVSEFA ILFGNELDAE VLSMSMDLYV ARAMITKASL AFKGSLDITE NQLSSLKKFH VRLMSIVLDV DVEPSTTPWD PAKAYLFVPV TDNTSMEPIK
1101: GINWELVEKI TKTTAWDNPL QRARPDVYLG TNERTLGGDR REYGFGKLRH NIVFGQKSHP TYGIRGAVAS FDVVRASGLL PVRDAFEKEV EEDLSKGKLM
1201: MADGCMVAED LIGKIVTAAH SGKRFYVDSI CYDMSAETSF PRKEGYLGPL EYNTYADYYK QKYGVDLNCK QQPLIKGRGV SYCKNLLSPR FEQSGESETV
1301: LDKTYYVFLP PELCVVHPLS GSLIRGAQRL PSIMRRVESM LLAVQLKNLI SYPIPTSKIL EALTAASCQE TFCYERAELL GDAYLKWVVS RFLFLKYPQK
1401: HEGQLTRMRQ QMVSNMVLYQ FALVKGLQSY IQADRFAPSR WSAPGVPPVF DEDTKDGGSS FFDEEQKPVS EENSDVFEDG EMEDGELEGD LSSYRVLSSK
1501: TLADVVEALI GVYYVEGGKI AANHLMKWIG IHVEDDPDEV DGTLKNVNVP ESVLKSIDFV GLERALKYEF KEKGLLVEAI THASRPSSGV SCYQRLEFVG
1601: DAVLDHLITR HLFFTYTSLP PGRLTDLRAA AVNNENFARV AVKHKLHLYL RHGSSALEKQ IREFVKEVQT ESSKPGFNSF GLGDCKAPKV LGDIVESIAG
1701: AIFLDSGKDT TAAWKVFQPL LQPMVTPETL PMHPVRELQE RCQQQAEGLE YKASRSGNTA TVEVFIDGVQ VGVAQNPQKK MAQKLAARNA LAALKEKEIA
1801: ESKEKHINNG NAGEDQGENE NGNKKNGHQP FTRQTLNDIC LRKNWPMPSY RCVKEGGPAH AKRFTFGVRV NTSDRGWTDE CIGEPMPSVK KAKDSAAVLL
1901: LELLNKTFS
Arabidopsis Description
DCL1Dicer-like 1 [Source:UniProtKB/TrEMBL;Acc:F4HQG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.