Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH68982 | Soybean | cytosol, nucleus, plastid | 96.25 | 96.15 |
| VIT_15s0048g02380.t01 | Wine grape | cytosol, nucleus, plastid | 80.72 | 80.6 |
| Bra033293.1-P | Field mustard | cytosol, nucleus, plastid | 73.16 | 77.09 |
| CDX90002 | Canola | nucleus | 71.57 | 76.82 |
| CDY15207 | Canola | nucleus | 71.36 | 76.73 |
| AT1G01040.2 | Thale cress | nucleus | 75.01 | 76.39 |
| Solyc10g005130.2.1 | Tomato | nucleus | 72.96 | 75.16 |
| PGSC0003DMT400029301 | Potato | nucleus | 73.93 | 75.13 |
| GSMUA_Achr8P12350_001 | Banana | nucleus | 69.77 | 74.64 |
| KXG40313 | Sorghum | cytosol, nucleus, plastid | 73.52 | 74.13 |
| Zm00001d027412_P004 | Maize | cytosol, nucleus, plastid | 73.32 | 73.85 |
| Os03t0121800-01 | Rice | cytosol, nucleus, plasma membrane | 71.47 | 73.82 |
| TraesCS5A01G516000.1 | Wheat | cytosol, nucleus, plastid | 71.98 | 70.99 |
| TraesCS4B01G347300.1 | Wheat | cytosol, nucleus, plastid | 72.19 | 70.87 |
| HORVU4Hr1G084890.7 | Barley | cytosol, nucleus, plastid | 71.83 | 69.95 |
| TraesCS4D01G342300.1 | Wheat | mitochondrion | 72.03 | 69.22 |
| KRH11802 | Soybean | cytosol | 6.22 | 42.46 |
| KRH14361 | Soybean | cytosol | 5.96 | 33.62 |
| KRH36818 | Soybean | cytosol, nucleus, plastid | 23.65 | 32.53 |
| KRH36816 | Soybean | cytosol | 23.24 | 31.81 |
| KRH61605 | Soybean | nucleus | 26.89 | 31.24 |
| KRH52276 | Soybean | cytosol | 7.92 | 30.62 |
| KRH20103 | Soybean | nucleus | 23.8 | 28.28 |
| KRH03544 | Soybean | nucleus | 23.65 | 28.12 |
| KRG97157 | Soybean | cytosol, nucleus, plasma membrane | 10.54 | 26.02 |
Protein Annotations
| Gene3D:1.10.1520.10 | EntrezGene:100811631 | MapMan:16.10.2.1.1 | Gene3D:2.170.260.10 | Gene3D:3.30.160.20 | Gene3D:3.30.160.380 |
| EMBL:ACUP02012181 | InterPro:Dicer_dimer_sf | InterPro:Dicer_dimerisation_dom | EnsemblPlantsGene:GLYMA_19G261200 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004525 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016442 | GO:GO:0016787 | GO:GO:0016891 | GO:GO:0030422 | GO:GO:0031047 |
| GO:GO:0040029 | GO:GO:0090501 | GO:GO:0090502 | InterPro:Helicase/UvrB_N | InterPro:Helicase_ATP-bd | InterPro:Helicase_C |
| InterPro:IPR000999 | InterPro:IPR001650 | InterPro:IPR003100 | InterPro:IPR005034 | InterPro:IPR014001 | InterPro:IPR014720 |
| InterPro:IPR036389 | InterPro:IPR038248 | UniProt:K7N0F5 | ProteinID:KRG97264.1 | ProteinID:KRG97265.1 | EnsemblPlants:KRG97266 |
| ProteinID:KRG97266 | ProteinID:KRG97266.1 | ProteinID:KRG97267.1 | InterPro:P-loop_NTPase | InterPro:PAZ_dom | InterPro:PAZ_dom_sf |
| PFAM:PF00271 | PFAM:PF00636 | PFAM:PF02170 | PFAM:PF03368 | PFAM:PF04851 | PFAM:PF14709 |
| ScanProsite:PS00517 | PFscan:PS50137 | PFscan:PS50142 | PFscan:PS50821 | PFscan:PS51192 | PFscan:PS51194 |
| PFscan:PS51327 | PANTHER:PTHR14950 | PANTHER:PTHR14950:SF44 | InterPro:RNase_III_dom | InterPro:RNase_III_sf | SMART:SM00358 |
| SMART:SM00487 | SMART:SM00490 | SMART:SM00535 | SMART:SM00949 | SUPFAM:SSF101690 | SUPFAM:SSF52540 |
| SUPFAM:SSF54768 | SUPFAM:SSF69065 | UniParc:UPI0002948A2A | InterPro:dsRBD_dom | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr19:-:50422235..50434967
Molecular Weight (calculated)
217712.0 Da
IEP (calculated)
6.515
GRAVY (calculated)
-0.456
Length
1945 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEDGSRVPAG DDPSYWLDAC EDISCDDFID FDVSSIVVSD QPDNPSNQDF FGGIDKILDS IKNGAGLPLN HAAAEPPSNV TAAASGGAEV CLPSNATPED
0101: SFDHSGGAAL SNGSSKQSNG NETGVLVDYS QERGTPTLNG GLDFDGEERC SKRARLGGYN NDRPYHGRGN YQGKERERCF SNNRKRPRGG RDEIDRRDKD
0201: GGGRKREHCG AVGRRDVRDR DWRDRETRGY WERDKSGSTD MVFRTGAWEP DCNREDKMAI DMKLEKNGNL DKKSEEAKER VPEEKARQYQ LDVLEQAKRK
0301: NTIAFLETGA GKTLIAVLLI KSIQESLHKQ NKKMLAVFLV PKVPLVYQQA EVIRERTGYQ VGHYCGEMGQ DFWDARRWQR EFDTKHVLVM TAQILLNILR
0401: HSIIKMEAIN LLILDECHHA VKKHPYSLVM SEFYHTTPKE NRPSVFGMTA SPVNLKGVSS QVDCAIKIRN LESKLDSIVC TIKDRKELEK HVPMPSEVVV
0501: EYDKAASLCY LHEQIKQMEV EVEEAAKCSS RRSKWQFMGA RDAGAKEELR QVYGVSERTE SDGAANLIQK LRAVNYALGE LGQWCAYKVA QSFLAALQND
0601: ERANYQLDVK FQETYLSKVV SLLKCQLSEG AVSDKNAGID DSENGAVQSG SEHEEMEEGE LPDSHVVSGG EHVDVIIGAA VADGKVTPKV QALIKILLKY
0701: QHTEDFRAII FVERVVSALV LPKVFAELPS LSFVKCASLI GHNNSQEMRT YQMQDTIAKF RDGRVTLLVA TSVAEEGLDI RQCNVVIRFD LAKTVLAYIQ
0801: SRGRARKPGS DYILMVERDN LSHEAFLRNA RNSEETLRKE AIERTDLSHL KDTSRLISVD TRPGTVYQVK STGAVVSLNS AVGLIHFYCS QLPSDRYSIL
0901: RPEFIMERHE KPGGPTEYSC KLQLPCNAPF ENLEGPICSS MRLAQQAVCL AACKKLHEMG AFTDMLLPDK GSGGEKEKDE QTDEGDPLPG TARHREFYPE
1001: GVADILKGEW ILSGKDACNN SKLLHLYMYA VKCENLGHSK DPFLTQVSNF AVLFGNELDA EVLSMSMDLF IARTVTTKSS LVFRGLISIT ESQLASLKSF
1101: HVRLMSIVLD VDVEPSTTPW DPAKAYLFVP MVGDKSVDPT NQIDWHLVET IIGADAWKNP LQKARPDVYL GTNERTLGGD RREYGFGKLR HGMAFGQKSH
1201: PTYGIRGAVA QFDVVKASGL VPNRDAMQTQ KHINMTTNGK LMMADTCTNA EDLIGKIVTA AHSGKRFYVD SIRYDMSAEN SFPRKEGYLG PLEYSSYADY
1301: YKQKYGVDLI YRQQPLIRGR GVSYCKNLLS PRFEHSEAHE GESEETHDKT YYVFLPPELC LVHPLPGSLV RGAQRLPSIM RRVESMLLAV QLKNMINYPV
1401: QASKILEALT AASCQETFCY ERAELLGDAY LKWVVSRFLF LKYPQKHEGQ LTRMRQQMVS NMVLYQYALS KGLQSYIQAD RFAPSRWAAP GVLPVFDEDT
1501: KDGESSLFDQ ERSISKIERM DCHTDGYEDE MEDGELESDS SSYRVLSSKT LADVVEALIG VYYVEGGKNA ANHLMKWMGI QIEFDPDTMD CTRKPFNVPD
1601: SILRSVDFDA LEGALNMKFK DRGLLVESIT HASRPSSGVS CYQRLEFVGD AVLDHLITRH LFFTYTNLPP GRLTDLRAAA VNNENFARVA VKHNLHVHLR
1701: HGSSALEKQI KEFVKEVQDE LSKPGFNSFG LGDCKAPKVL GDILESIAGA IFLDSGRDTT VVWKVFQPLL HPMVTPETLP MHPVRELQER CQQQAEGLEY
1801: KASRIGNLAT VEVFIDGVQV GAAQNPQKKM AQKLAARNAL AALKEKEVGK TQEKNDDNGK KNGNQTFTRQ TLNDICLRRN WPMPFYRCVN EGGPAHAKRF
1901: TFAVRVNTTD KGWTDECVGE PMPSVKKAKD SAAVLLLELL NKLYS
0101: SFDHSGGAAL SNGSSKQSNG NETGVLVDYS QERGTPTLNG GLDFDGEERC SKRARLGGYN NDRPYHGRGN YQGKERERCF SNNRKRPRGG RDEIDRRDKD
0201: GGGRKREHCG AVGRRDVRDR DWRDRETRGY WERDKSGSTD MVFRTGAWEP DCNREDKMAI DMKLEKNGNL DKKSEEAKER VPEEKARQYQ LDVLEQAKRK
0301: NTIAFLETGA GKTLIAVLLI KSIQESLHKQ NKKMLAVFLV PKVPLVYQQA EVIRERTGYQ VGHYCGEMGQ DFWDARRWQR EFDTKHVLVM TAQILLNILR
0401: HSIIKMEAIN LLILDECHHA VKKHPYSLVM SEFYHTTPKE NRPSVFGMTA SPVNLKGVSS QVDCAIKIRN LESKLDSIVC TIKDRKELEK HVPMPSEVVV
0501: EYDKAASLCY LHEQIKQMEV EVEEAAKCSS RRSKWQFMGA RDAGAKEELR QVYGVSERTE SDGAANLIQK LRAVNYALGE LGQWCAYKVA QSFLAALQND
0601: ERANYQLDVK FQETYLSKVV SLLKCQLSEG AVSDKNAGID DSENGAVQSG SEHEEMEEGE LPDSHVVSGG EHVDVIIGAA VADGKVTPKV QALIKILLKY
0701: QHTEDFRAII FVERVVSALV LPKVFAELPS LSFVKCASLI GHNNSQEMRT YQMQDTIAKF RDGRVTLLVA TSVAEEGLDI RQCNVVIRFD LAKTVLAYIQ
0801: SRGRARKPGS DYILMVERDN LSHEAFLRNA RNSEETLRKE AIERTDLSHL KDTSRLISVD TRPGTVYQVK STGAVVSLNS AVGLIHFYCS QLPSDRYSIL
0901: RPEFIMERHE KPGGPTEYSC KLQLPCNAPF ENLEGPICSS MRLAQQAVCL AACKKLHEMG AFTDMLLPDK GSGGEKEKDE QTDEGDPLPG TARHREFYPE
1001: GVADILKGEW ILSGKDACNN SKLLHLYMYA VKCENLGHSK DPFLTQVSNF AVLFGNELDA EVLSMSMDLF IARTVTTKSS LVFRGLISIT ESQLASLKSF
1101: HVRLMSIVLD VDVEPSTTPW DPAKAYLFVP MVGDKSVDPT NQIDWHLVET IIGADAWKNP LQKARPDVYL GTNERTLGGD RREYGFGKLR HGMAFGQKSH
1201: PTYGIRGAVA QFDVVKASGL VPNRDAMQTQ KHINMTTNGK LMMADTCTNA EDLIGKIVTA AHSGKRFYVD SIRYDMSAEN SFPRKEGYLG PLEYSSYADY
1301: YKQKYGVDLI YRQQPLIRGR GVSYCKNLLS PRFEHSEAHE GESEETHDKT YYVFLPPELC LVHPLPGSLV RGAQRLPSIM RRVESMLLAV QLKNMINYPV
1401: QASKILEALT AASCQETFCY ERAELLGDAY LKWVVSRFLF LKYPQKHEGQ LTRMRQQMVS NMVLYQYALS KGLQSYIQAD RFAPSRWAAP GVLPVFDEDT
1501: KDGESSLFDQ ERSISKIERM DCHTDGYEDE MEDGELESDS SSYRVLSSKT LADVVEALIG VYYVEGGKNA ANHLMKWMGI QIEFDPDTMD CTRKPFNVPD
1601: SILRSVDFDA LEGALNMKFK DRGLLVESIT HASRPSSGVS CYQRLEFVGD AVLDHLITRH LFFTYTNLPP GRLTDLRAAA VNNENFARVA VKHNLHVHLR
1701: HGSSALEKQI KEFVKEVQDE LSKPGFNSFG LGDCKAPKVL GDILESIAGA IFLDSGRDTT VVWKVFQPLL HPMVTPETLP MHPVRELQER CQQQAEGLEY
1801: KASRIGNLAT VEVFIDGVQV GAAQNPQKKM AQKLAARNAL AALKEKEVGK TQEKNDDNGK KNGNQTFTRQ TLNDICLRRN WPMPFYRCVN EGGPAHAKRF
1901: TFAVRVNTTD KGWTDECVGE PMPSVKKAKD SAAVLLLELL NKLYS
0001: MVMEDEPREA TIKPSYWLDA CEDISCDLID DLVSEFDPSS VAVNESTDEN GVINDFFGGI DHILDSIKNG GGLPNNGVSD TNSQINEVTV TPQVIAKETV
0101: KENGLQKNGG KRDEFSKEEG DKDRKRARVC SYQSERSNLS GRGHVNNSRE GDRFMNRKRT RNWDEAGNNK KKRECNNYRR DGRDREVRGY WERDKVGSNE
0201: LVYRSGTWEA DHERDVKKVS GGNRECDVKA EENKSKPEER KEKVVEEQAR RYQLDVLEQA KAKNTIAFLE TGAGKTLIAI LLIKSVHKDL MSQNRKMLSV
0301: FLVPKVPLVY QQAEVIRNQT CFQVGHYCGE MGQDFWDSRR WQREFESKQV LVMTAQILLN ILRHSIIRME TIDLLILDEC HHAVKKHPYS LVMSEFYHTT
0401: PKDKRPAIFG MTASPVNLKG VSSQVDCAIK IRNLETKLDS TVCTIKDRKE LEKHVPMPSE IVVEYDKAAT MWSLHETIKQ MIAAVEEAAQ ASSRKSKWQF
0501: MGARDAGAKD ELRQVYGVSE RTESDGAANL IHKLRAINYT LAELGQWCAY KVGQSFLSAL QSDERVNFQV DVKFQESYLS EVVSLLQCEL LEGAAAEKVA
0601: AEVGKPENGN AHDEMEEGEL PDDPVVSGGE HVDEVIGAAV ADGKVTPKVQ SLIKLLLKYQ HTADFRAIVF VERVVAALVL PKVFAELPSL SFIRCASMIG
0701: HNNSQEMKSS QMQDTISKFR DGHVTLLVAT SVAEEGLDIR QCNVVMRFDL AKTVLAYIQS RGRARKPGSD YILMVERGNV SHAAFLRNAR NSEETLRKEA
0801: IERTDLSHLK DTSRLISIDA VPGTVYKVEA TGAMVSLNSA VGLVHFYCSQ LPGDRYAILR PEFSMEKHEK PGGHTEYSCR LQLPCNAPFE ILEGPVCSSM
0901: RLAQQAVCLA ACKKLHEMGA FTDMLLPDKG SGQDAEKADQ DDEGEPVPGT ARHREFYPEG VADVLKGEWV SSGKEVCESS KLFHLYMYNV RCVDFGSSKD
1001: PFLSEVSEFA ILFGNELDAE VLSMSMDLYV ARAMITKASL AFKGSLDITE NQLSSLKKFH VRLMSIVLDV DVEPSTTPWD PAKAYLFVPV TDNTSMEPIK
1101: GINWELVEKI TKTTAWDNPL QRARPDVYLG TNERTLGGDR REYGFGKLRH NIVFGQKSHP TYGIRGAVAS FDVVRASGLL PVRDAFEKEV EEDLSKGKLM
1201: MADGCMVAED LIGKIVTAAH SGKRFYVDSI CYDMSAETSF PRKEGYLGPL EYNTYADYYK QKYGVDLNCK QQPLIKGRGV SYCKNLLSPR FEQSGESETV
1301: LDKTYYVFLP PELCVVHPLS GSLIRGAQRL PSIMRRVESM LLAVQLKNLI SYPIPTSKIL EALTAASCQE TFCYERAELL GDAYLKWVVS RFLFLKYPQK
1401: HEGQLTRMRQ QMVSNMVLYQ FALVKGLQSY IQADRFAPSR WSAPGVPPVF DEDTKDGGSS FFDEEQKPVS EENSDVFEDG EMEDGELEGD LSSYRVLSSK
1501: TLADVVEALI GVYYVEGGKI AANHLMKWIG IHVEDDPDEV DGTLKNVNVP ESVLKSIDFV GLERALKYEF KEKGLLVEAI THASRPSSGV SCYQRLEFVG
1601: DAVLDHLITR HLFFTYTSLP PGRLTDLRAA AVNNENFARV AVKHKLHLYL RHGSSALEKQ IREFVKEVQT ESSKPGFNSF GLGDCKAPKV LGDIVESIAG
1701: AIFLDSGKDT TAAWKVFQPL LQPMVTPETL PMHPVRELQE RCQQQAEGLE YKASRSGNTA TVEVFIDGVQ VGVAQNPQKK MAQKLAARNA LAALKEKEIA
1801: ESKEKHINNG NAGEDQGENE NGNKKNGHQP FTRQTLNDIC LRKNWPMPSY RCVKEGGPAH AKRFTFGVRV NTSDRGWTDE CIGEPMPSVK KAKDSAAVLL
1901: LELLNKTFS
0101: KENGLQKNGG KRDEFSKEEG DKDRKRARVC SYQSERSNLS GRGHVNNSRE GDRFMNRKRT RNWDEAGNNK KKRECNNYRR DGRDREVRGY WERDKVGSNE
0201: LVYRSGTWEA DHERDVKKVS GGNRECDVKA EENKSKPEER KEKVVEEQAR RYQLDVLEQA KAKNTIAFLE TGAGKTLIAI LLIKSVHKDL MSQNRKMLSV
0301: FLVPKVPLVY QQAEVIRNQT CFQVGHYCGE MGQDFWDSRR WQREFESKQV LVMTAQILLN ILRHSIIRME TIDLLILDEC HHAVKKHPYS LVMSEFYHTT
0401: PKDKRPAIFG MTASPVNLKG VSSQVDCAIK IRNLETKLDS TVCTIKDRKE LEKHVPMPSE IVVEYDKAAT MWSLHETIKQ MIAAVEEAAQ ASSRKSKWQF
0501: MGARDAGAKD ELRQVYGVSE RTESDGAANL IHKLRAINYT LAELGQWCAY KVGQSFLSAL QSDERVNFQV DVKFQESYLS EVVSLLQCEL LEGAAAEKVA
0601: AEVGKPENGN AHDEMEEGEL PDDPVVSGGE HVDEVIGAAV ADGKVTPKVQ SLIKLLLKYQ HTADFRAIVF VERVVAALVL PKVFAELPSL SFIRCASMIG
0701: HNNSQEMKSS QMQDTISKFR DGHVTLLVAT SVAEEGLDIR QCNVVMRFDL AKTVLAYIQS RGRARKPGSD YILMVERGNV SHAAFLRNAR NSEETLRKEA
0801: IERTDLSHLK DTSRLISIDA VPGTVYKVEA TGAMVSLNSA VGLVHFYCSQ LPGDRYAILR PEFSMEKHEK PGGHTEYSCR LQLPCNAPFE ILEGPVCSSM
0901: RLAQQAVCLA ACKKLHEMGA FTDMLLPDKG SGQDAEKADQ DDEGEPVPGT ARHREFYPEG VADVLKGEWV SSGKEVCESS KLFHLYMYNV RCVDFGSSKD
1001: PFLSEVSEFA ILFGNELDAE VLSMSMDLYV ARAMITKASL AFKGSLDITE NQLSSLKKFH VRLMSIVLDV DVEPSTTPWD PAKAYLFVPV TDNTSMEPIK
1101: GINWELVEKI TKTTAWDNPL QRARPDVYLG TNERTLGGDR REYGFGKLRH NIVFGQKSHP TYGIRGAVAS FDVVRASGLL PVRDAFEKEV EEDLSKGKLM
1201: MADGCMVAED LIGKIVTAAH SGKRFYVDSI CYDMSAETSF PRKEGYLGPL EYNTYADYYK QKYGVDLNCK QQPLIKGRGV SYCKNLLSPR FEQSGESETV
1301: LDKTYYVFLP PELCVVHPLS GSLIRGAQRL PSIMRRVESM LLAVQLKNLI SYPIPTSKIL EALTAASCQE TFCYERAELL GDAYLKWVVS RFLFLKYPQK
1401: HEGQLTRMRQ QMVSNMVLYQ FALVKGLQSY IQADRFAPSR WSAPGVPPVF DEDTKDGGSS FFDEEQKPVS EENSDVFEDG EMEDGELEGD LSSYRVLSSK
1501: TLADVVEALI GVYYVEGGKI AANHLMKWIG IHVEDDPDEV DGTLKNVNVP ESVLKSIDFV GLERALKYEF KEKGLLVEAI THASRPSSGV SCYQRLEFVG
1601: DAVLDHLITR HLFFTYTSLP PGRLTDLRAA AVNNENFARV AVKHKLHLYL RHGSSALEKQ IREFVKEVQT ESSKPGFNSF GLGDCKAPKV LGDIVESIAG
1701: AIFLDSGKDT TAAWKVFQPL LQPMVTPETL PMHPVRELQE RCQQQAEGLE YKASRSGNTA TVEVFIDGVQ VGVAQNPQKK MAQKLAARNA LAALKEKEIA
1801: ESKEKHINNG NAGEDQGENE NGNKKNGHQP FTRQTLNDIC LRKNWPMPSY RCVKEGGPAH AKRFTFGVRV NTSDRGWTDE CIGEPMPSVK KAKDSAAVLL
1901: LELLNKTFS
Arabidopsis Description
DCL1Dicer-like 1 [Source:UniProtKB/TrEMBL;Acc:F4HQG6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.