Factsheet for AT5G45150.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G20420.1	Thale cress	plastid	15.67	38.36
VIT_19s0090g00940.t01	Wine grape	cytosol	13.06	37.09
KRH14361	Soybean	cytosol	12.96	35.94
GSMUA_Achr7P11130_001	Banana	cytosol, nucleus, plastid	11.91	33.43
PGSC0003DMT400033487	Potato	cytosol	12.23	31.88
Os05t0271300-00	Rice	cytosol, nucleus, plastid	10.24	30.91
TraesCS7A01G512700.1	Wheat	mitochondrion	11.7	30.85
Solyc12g014410.1.1	Tomato	cytosol, nucleus, plastid	12.54	30.69
GSMUA_Achr7P11120_001	Banana	cytosol, nucleus, plastid	12.96	30.47
GSMUA_Achr2P15170_001	Banana	cytosol	10.76	30.29
Zm00001d009879_P002	Maize	plastid	11.6	29.52
TraesCS7D01G398600.2	Wheat	mitochondrion, nucleus	11.39	29.3
TraesCS7D01G502800.1	Wheat	mitochondrion, nucleus	11.18	29.08
TraesCS7B01G428200.1	Wheat	mitochondrion	11.08	29.04
TraesCS7A01G513500.1	Wheat	nucleus	9.61	29.02
TraesCS7D01G504300.3	Wheat	mitochondrion	11.18	28.92
TraesCS7B01G430900.2	Wheat	mitochondrion	11.29	28.88
TraesCS7A01G513400.1	Wheat	cytosol, mitochondrion, nucleus, plastid	11.18	28.84
HORVU7Hr1G115000.1	Barley	nucleus	5.64	28.72
TraesCSU01G086900.1	Wheat	mitochondrion	10.87	28.03
HORVU7Hr1G115100.2	Barley	plastid	11.49	26.96
KXG21693	Sorghum	plastid	11.81	25.57
Os01t0551100-01	Rice	cytosol	6.58	24.61
AT4G15417.2	Thale cress	mitochondrion	5.96	19.72
AT3G03300.1	Thale cress	nucleus	13.58	9.37
AT3G43920.2	Thale cress	cytosol, nucleus, plastid	14.21	8.61
AT5G20320.1	Thale cress	cytosol	15.15	8.52
AT1G01040.2	Thale cress	nucleus	14.84	7.43

Protein Annotations

Gene3D:1.10.1520.10	Gene3D:3.30.160.20	MapMan:35.1	EntrezGene:834551	ProteinID:AED95210.1	ArrayExpress:AT5G45150
EnsemblPlantsGene:AT5G45150	RefSeq:AT5G45150	TAIR:AT5G45150	RefSeq:AT5G45150-TAIR-G	EnsemblPlants:AT5G45150.1	TAIR:AT5G45150.1
Unigene:At.55380	ProteinID:BAB11388.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0004518	GO:GO:0004519	GO:GO:0004525	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006396	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016442	GO:GO:0016787
GO:GO:0019538	GO:GO:0030422	GO:GO:0040029	GO:GO:0090305	GO:GO:0090501	GO:GO:0090502
InterPro:IPR000999	InterPro:IPR014720	InterPro:IPR036389	RefSeq:NP_199328.1	PFAM:PF00035	PFAM:PF00636
PFAM:PF14709	PO:PO:0000293	PFscan:PS50137	PFscan:PS50142	PANTHER:PTHR14950	PANTHER:PTHR14950:SF35
UniProt:Q9FKF0	InterPro:RNase_III_dom	InterPro:RNase_III_sf	Symbol:RTL3	SMART:SM00358	SMART:SM00535
SUPFAM:SSF54768	SUPFAM:SSF69065	UniParc:UPI00000A2E4A	InterPro:dsRBD_dom	SEG:seg	:

Description

RTL3Ribonuclease 3-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKF0]

Coordinates

chr5:+:18260441..18264431

Molecular Weight (calculated)

108306.0 Da

IEP (calculated)

5.096

GRAVY (calculated)

-0.366

Length

957 amino acids

Sequence
(BLAST)

001: MNSVEAVEKI LNYSFVNKTL LKEAITQKSP LFDRLEFFGD SILEVAFTNY ICHTYPNLKV KELRDLRTAN VSNEKFARIA VNHNLHHFLL LQNPSLFKKV
101: KNFAEAVRKE DDPVPYGGLV KAPKILADTL ESIAATVFID VNYDVKRLWE IFRSLLEPIY TPDDLLLQPK LPFLTLFRLA DKHGSESTSG IRKMTTSTKI
201: LLRNKDCLDV DLEDVKGKSF EICSTELFSL STVSENSLTD EMSQEEVVID EDSPNVEPED VKGKLFEICY TRKLQIQTGS SGNPLTYEMT TKQMVVDKDS
301: LHVEPVNGRG ELIEICTKNK WPRPIFSVQE EKGPKNEPKF VCSVKIEIPN IEGTFHMKGD IKSKKKQAEN SLAYHMIRAL ESSLVSLVIS NLQKPKSLDE
401: KNNPLLFSSE MDSSVEAVEK ILNYSFVNKT LLKELLTHNN SPLFQGLMFV GESALSLAFT KHLYLTYPML EPKDLSVLRD ANTCHDKYAC VAVKKGIYQS
501: FIGSVPKPEK MTTDFIELMG KEDDPYRVVK APKILVNLLA GVAGAVYIDV KYNVQRLLEI FRVLLEPIYT LDDLRMQLKQ PFLMLFRLAD KHGKQIDFRY
601: SKDGGSRKNI AQVYMDDMFI ASGCAKRIDT AKLLAAEEAI QKLSECMPIE KIIHQDNLDG EVIQTGSSSL LTAFENPLTE EMTQEQMVID EDSLDVEWKL
701: FETEELQIQT GSSSMSTVSE NPLPCEITPT KMVIGEVSPH VELEDVKGKS FEISSTETSS LPIAFENPLT NELTQEQMVI DENSPYVEPV DTKGKLFESC
801: SVESSSLPTT SENPSTYEMT TKQMVVDKDS PHVEPEDEKG KLFEICAKNK WPNPIFSVEE ERGQQNEQKI VCSVKIEIPN IEGTFHIKGD AKPTKKEAEN
901: SSADHMIRAL ESSVMSLVIT NLQMHENLDG KKKNLQMKES LNENKTLLHS TKRRRRL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.