Factsheet for TraesCS7A01G003900.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear, peroxisome

Predictor Summary:

peroxisome 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, unclear
Any Predictor:	peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	peroxisome

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G494700.1	Wheat	golgi, peroxisome	99.25	99.25
HORVU6Hr1G020600.1	Barley	mitochondrion	22.6	94.97
Os06t0103500-01	Rice	peroxisome	91.32	91.18
EER87896	Sorghum	peroxisome	89.82	89.95
KXG19087	Sorghum	peroxisome	89.82	89.82
Zm00001d045251_P001	Maize	peroxisome	89.52	89.66
HORVU7Hr1G000580.2	Barley	peroxisome	97.6	85.56
Zm00001d045606_P002	Maize	peroxisome	87.28	83.76
GSMUA_Achr7P07440_001	Banana	peroxisome	80.69	80.93
CDY42938	Canola	peroxisome	77.54	78.01
Bra040093.1-P	Field mustard	peroxisome	77.4	77.86
CDY59471	Canola	peroxisome	77.4	77.86
AT4G16760.1	Thale cress	peroxisome	77.25	77.71
KRH57460	Soybean	nucleus	76.65	76.99
KRH16000	Soybean	cytosol, peroxisome	53.44	76.94
Solyc08g078390.2.1	Tomato	nucleus, peroxisome, unclear	75.9	76.36
PGSC0003DMT400012322	Potato	peroxisome	75.3	75.75
KRH28148	Soybean	peroxisome	75.45	75.68
AT2G35690.1	Thale cress	peroxisome	74.55	75.0
CDX79618	Canola	peroxisome	74.25	74.7
CDX84603	Canola	peroxisome	74.1	74.55
Bra023025.1-P	Field mustard	peroxisome	74.1	74.55
PGSC0003DMT400012318	Potato	peroxisome	73.05	73.49
Solyc08g078400.2.1	Tomato	unclear	69.61	71.65
KRH04170	Soybean	nucleus	56.74	69.8
KRH77335	Soybean	peroxisome	75.3	69.0
VIT_00s0389g00020.t01	Wine grape	nucleus, peroxisome	63.62	49.19
TraesCS4A01G172900.1	Wheat	mitochondrion	12.43	37.05
TraesCS7A01G223500.2	Wheat	peroxisome	27.4	26.33
TraesCS7A01G141800.1	Wheat	peroxisome	27.25	26.04
TraesCS7A01G339100.1	Wheat	mitochondrion	25.15	24.63

Protein Annotations

KEGG:00071+1.3.3.6	KEGG:00592+1.3.3.6	Gene3D:1.10.540.10	Gene3D:1.20.140.10	MapMan:11.7.1.8	Gene3D:2.40.110.10
MapMan:5.7.3.2.1	InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:Acyl-CoA_ox_N	InterPro:Acyl-CoA_oxidase	InterPro:Acyl-CoA_oxidase_C	InterPro:AcylCoA_DH/ox_N_sf
InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003997
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777
GO:GO:0006629	GO:GO:0006631	GO:GO:0006635	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016627	GO:GO:0050660	GO:GO:0055114	GO:GO:0071949	InterPro:IPR037069
PFAM:PF01756	PFAM:PF02770	PFAM:PF14749	PIRSF:PIRSF000168	PANTHER:PTHR10909	PANTHER:PTHR10909:SF369
SUPFAM:SSF47203	SUPFAM:SSF56645	EnsemblPlantsGene:TraesCS7A01G003900	EnsemblPlants:TraesCS7A01G003900.1	:	:

Description

No Description!

Coordinates

chr7A:+:1921522..1926376

Molecular Weight (calculated)

73925.7 Da

IEP (calculated)

7.032

GRAVY (calculated)

-0.190

Length

668 amino acids

Sequence
(BLAST)

001: MADGGGEPDQ LAGERATAQF DVDGMKVAWA GSRHAVEVAD RMARLVASDP VFRKDIRTML SRKELFKDTL KKAAHAWKRI VELRLTEEEA NLLRLYVDQP
101: GYVDLHWGMF VPAIKGQGTE EQQKKWLPMA YKFQIIGCYA QTELGHGSNV QGLETTATFD PSTDEFVMHS PTLTSSKWWP GGLGKASTHA VVYARLITEG
201: KDYGIHGFIV QLRSLDDHSP LPGVTLGDIG GKFGSGAYNS MDNGVLRFDH VRIPRDQMLM RLSQVTREGK YVHSDVPKQL LYGTMVYVRQ TIVADASKAL
301: SRAVCIAVRY SAIRKQFGSQ DGGPETQVLN YKTQQSRLFP LLASAYAYRF VGQWLKWLYT DVTQKLEAKD YSTLPEAHAC TAGLKSVTTS ATADAIEECR
401: KLCGGHGYLN SSGLPELFAV YVPACTYEGD NVVLLLQVAR FLMKTVAQVA TGKQPVGTIA YMGNIQHLMQ CKSAVNTAED WLNPAAIKEV FEARALRMAV
501: NCAQNISKAP SQEEGFSELS PDLLEAAVAH VQLIIVTKFI EKLQEDIPGP GVKEQLQNLC SIYALHLLHK HLGDFLSTGC VTARQGALAN ELLGKLYAQV
601: RPNAVALVDA FDYTDHYLGS VLGRYDGDVY PALYEEAWKD PLNETVVPDG YQEHLRPLLK QQLKLSRL

Best Arabidopsis Sequence Match ( AT4G16760.1 )
(BLAST)

001: MEGIDHLADE RNKAEFDVED MKIVWAGSRH AFEVSDRIAR LVASDPVFEK SNRARLSRKE LFKSTLRKCA HAFKRIIELR LNEEEAGRLR HFIDQPAYVD
101: LHWGMFVPAI KGQGTEEQQK KWLSLANKMQ IIGCYAQTEL GHGSNVQGLE TTATFDPKTD EFVIHTPTQT ASKWWPGGLG KVSTHAVVYA RLITNGKDYG
201: IHGFIVQLRS LEDHSPLPNI TVGDIGTKMG NGAYNSMDNG FLMFDHVRIP RDQMLMRLSK VTREGEYVPS DVPKQLVYGT MVYVRQTIVA DASNALSRAV
301: CIATRYSAVR RQFGAHNGGI ETQVIDYKTQ QNRLFPLLAS AYAFRFVGEW LKWLYTDVTE RLAASDFATL PEAHACTAGL KSLTTTATAD GIEECRKLCG
401: GHGYLWCSGL PELFAVYVPA CTYEGDNVVL QLQVARFLMK TVAQLGSGKV PVGTTAYMGR AAHLLQCRSG VQKAEDWLNP DVVLEAFEAR ALRMAVTCAK
501: NLSKFENQEQ GFQELLADLV EAAIAHCQLI VVSKFIAKLE QDIGGKGVKK QLNNLCYIYA LYLLHKHLGD FLSTNCITPK QASLANDQLR SLYTQVRPNA
601: VALVDAFNYT DHYLNSVLGR YDGNVYPKLF EEALKDPLND SVVPDGYQEY LRPVLQQQLR TARL

Arabidopsis Description

ACX1Peroxisomal acyl-coenzyme A oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65202]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.