CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84603	Canola	peroxisome	98.49	98.49
AT2G35690.1	Thale cress	peroxisome	89.46	89.46
CDY59471	Canola	peroxisome	85.09	85.09
CDY42938	Canola	peroxisome	85.09	85.09
KRH57460	Soybean	nucleus	77.41	77.29
Solyc08g078390.2.1	Tomato	nucleus, peroxisome, unclear	77.26	77.26
PGSC0003DMT400012322	Potato	peroxisome	76.96	76.96
KRH16000	Soybean	cytosol, peroxisome	53.61	76.72
KRH28148	Soybean	peroxisome	76.81	76.58
GSMUA_Achr7P07440_001	Banana	peroxisome	76.36	76.13
TraesCS7A01G003900.1	Wheat	peroxisome, unclear	74.7	74.25
TraesCS4A01G494700.1	Wheat	golgi, peroxisome	74.7	74.25
TraesCS7D01G004400.1	Wheat	peroxisome	74.25	73.69
Os06t0103500-01	Rice	peroxisome	74.1	73.54
KXG19087	Sorghum	peroxisome	73.95	73.5
PGSC0003DMT400012318	Potato	peroxisome	72.89	72.89
Zm00001d045251_P001	Maize	peroxisome	73.19	72.86
EER87896	Sorghum	peroxisome	73.04	72.71
KRH04170	Soybean	nucleus	58.73	71.82
Solyc08g078400.2.1	Tomato	unclear	69.73	71.34
KRH77335	Soybean	peroxisome	76.81	69.96
Zm00001d045606_P002	Maize	peroxisome	72.29	68.97
VIT_00s0389g00020.t01	Wine grape	nucleus, peroxisome	64.91	49.88
HORVU2Hr1G031180.5	Barley	peroxisome	21.23	47.47
CDY14540	Canola	peroxisome	26.05	25.11
CDY08820	Canola	peroxisome	26.05	25.07
CDY18687	Canola	plastid	25.6	25.0
CDX81267	Canola	plastid	25.6	25.0
CDY57818	Canola	peroxisome	25.3	24.89
CDY10192	Canola	mitochondrion	25.0	24.52
CDY10194	Canola	mitochondrion, peroxisome	24.25	23.89
CDY57822	Canola	peroxisome	23.95	23.56

Protein Annotations

KEGG:00071+1.3.3.6	KEGG:00592+1.3.3.6	Gene3D:1.10.540.10	Gene3D:1.20.140.10	MapMan:11.7.1.8	Gene3D:2.40.110.10
MapMan:5.7.3.2.1	GO:A0A078CWW3	InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:Acyl-CoA_ox_N	InterPro:Acyl-CoA_oxidase	InterPro:Acyl-CoA_oxidase_C
InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	EnsemblPlants:CDX79618	ProteinID:CDX79618	ProteinID:CDX79618.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003997	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006629	GO:GO:0006631
GO:GO:0006635	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016627
GO:GO:0050660	GO:GO:0055114	GO:GO:0071949	EnsemblPlantsGene:GSBRNA2T00132396001	InterPro:IPR037069	PFAM:PF01756
PFAM:PF02770	PFAM:PF14749	PIRSF:PIRSF000168	PANTHER:PTHR10909	PANTHER:PTHR10909:SF369	MetaCyc:PWY-5136
MetaCyc:PWY-6837	MetaCyc:PWY-6920	MetaCyc:PWY-7007	MetaCyc:PWY-7288	MetaCyc:PWY-7291	MetaCyc:PWY-7337
MetaCyc:PWY-7338	MetaCyc:PWY-7340	MetaCyc:PWY-735	MetaCyc:PWY-7606	MetaCyc:PWY-7726	SUPFAM:SSF47203
SUPFAM:SSF56645	UniParc:UPI0004EB5181	:	:	:	:

Description

BnaC03g19540D

Coordinates

chrLK031818:+:1184399..1188420

Molecular Weight (calculated)

74390.3 Da

IEP (calculated)

8.399

GRAVY (calculated)

-0.231

Length

664 amino acids

Sequence
(BLAST)

001: MEGGDHLAHE RNKAEFDVNE MKIVWAGSRH AFEVSNRMSR LVASDPVFDK SNRAVMTRKE LFKNTLRKSA HAWKLINELR LSDEESVIFK YFMDQPGFLD
101: LHWRMFVPAI KGQGTEEQKQ KWLPLANKMQ IIGCYAQTEL GHGSNVQGLE TTATFDPQTD QFILHSPTQT SSKWWPGGLG KVSTHAVVYA RLITNGKDHG
201: VHGFIVQLRN LDDHSPLPGI TIGDIGVKFG NGAYNSMDNG FLMFDKFCIP RDQMLMRLSK VTREGKYVPS DVPRQLMYGT MVSVRQTIVS NASVAMARAA
301: CIATRYSAVR RQFGSQNGGI ETQVIDYKTQ QNRLFPLLAS AYAFRFVGEW LKWLYTDVTQ RLEASDFATL PEAHACTAGL KSMTTSATSD GIEECRKLCG
401: GHGYLWCSGL PELFAVYVPA CTYEGDNVVL QLQVARFLMK TVAQLSSGKA PAGTTAYMGR AKHLLHCHSS IRKAEDWLNP AMVLEAFEAR ALRMAVSCAN
501: NLSKFENQEQ GFSELLADLV EAAIAHCQLI VVSKFIAKLE GDIKGKGVKN QLKNLCYIYA LHLIHKHLGD FLSTNTITPE QASLANNQLR SLYSQLRPNA
601: VALVDAFDYT DHYLGSVLGR YDGNVYPKLF EEALKDPFND SVVPDGYHEY IRPFIKQHLR SARL

Best Arabidopsis Sequence Match ( AT2G35690.1 )
(BLAST)

001: MERVDHLADE RNKAEFNVDD MKIVWAGSRH AFDVSNRMSR LVANDPVFEK SKRAVMSRKE LFKNTLRKSV HAWKLINELR LSDEEGLKLR SFMDQPGFLD
101: LHWGMFVPAI KGQGTEQQQQ KWLSLATKMQ IIGCYAQTEL GHGSNVQGLE TTATFDPKTD QFIIHSPTQT SSKWWPGGLG KVSTHAVIYA RLITNGKDHG
201: VHGFIVQLRS LDDHSPLPGI TVGDIGMKFG NGAYNSMDNG FLMFDHFRIP RDQMLMRLSK VTREGKYVAS DVPRQLVYGT MVYVRQSIVS NASTALARAV
301: CIATRYSAVR RQFGSHDGGI ETQVINYKTQ QNRLFPLLAS AYAFRFVGEW LKWLYTDVTK RLEASDFATL PEAHACTAGL KSMTTSATSD GIEECRKLCG
401: GHGYLWCSGL PELFAVYVPA CTYEGDNVVL QLQVARFLMK TVSQLGSGKA PSGTTAYMGR AKHLLQCSSG VRNARDWLNP GMVLEAFEAR ALRMAVTCAN
501: NLSKFENQEQ GFSELLADLV EAATAHCQLI VVSKFIAKVE GDIEGKGVKK QLKNLCYIYA LYLLHKHLGD FLSTNSVTPE QASLANQQLR SLYSQVRPNA
601: VALVDAFDYT DQYLGSVLGR YDGNVYPKLF EEALKDPLND SVVPDGYREY IRPLIKQRFR SAKL

Arabidopsis Description

ACX1.2Putative peroxisomal acyl-coenzyme A oxidase 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQP2]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.