Factsheet for VIT_00s0389g00020.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus

Predictor Summary:

nucleus 2
peroxisome 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome
Any Predictor:	nucleus, peroxisome
BaCelLo:	nucleus
EpiLoc:	peroxisome
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28148	Soybean	peroxisome	53.7	69.67
KRH57460	Soybean	nucleus	53.24	69.17
PGSC0003DMT400012322	Potato	peroxisome	52.66	68.52
Solyc08g078390.2.1	Tomato	nucleus, peroxisome, unclear	52.31	68.07
CDY59471	Canola	peroxisome	51.74	67.32
AT4G16760.1	Thale cress	peroxisome	51.62	67.17
CDY42938	Canola	peroxisome	51.62	67.17
Bra040093.1-P	Field mustard	peroxisome	51.5	67.02
GSMUA_Achr7P07440_001	Banana	peroxisome	51.04	66.22
KRH16000	Soybean	cytosol, peroxisome	35.19	65.52
PGSC0003DMT400012318	Potato	peroxisome	50.35	65.51
Zm00001d045251_P001	Maize	peroxisome	50.12	64.92
CDX84603	Canola	peroxisome	49.88	64.91
CDX79618	Canola	peroxisome	49.88	64.91
Bra023025.1-P	Field mustard	peroxisome	49.88	64.91
EER87896	Sorghum	peroxisome	49.88	64.62
AT2G35690.1	Thale cress	peroxisome	49.54	64.46
KXG19087	Sorghum	peroxisome	49.65	64.22
KRH77335	Soybean	peroxisome	53.94	63.92
Os06t0103500-01	Rice	peroxisome	49.31	63.68
TraesCS4A01G494700.1	Wheat	golgi, peroxisome	49.19	63.62
TraesCS7A01G003900.1	Wheat	peroxisome, unclear	49.19	63.62
TraesCS7D01G004400.1	Wheat	peroxisome	49.19	63.53
Solyc08g078400.2.1	Tomato	unclear	47.34	63.02
Zm00001d045606_P002	Maize	peroxisome	48.15	59.77
KRH04170	Soybean	nucleus	37.5	59.67
HORVU2Hr1G031180.5	Barley	peroxisome	12.04	35.02
VIT_00s0662g00010.t01	Wine grape	peroxisome	17.71	22.27
VIT_12s0028g02660.t01	Wine grape	mitochondrion	15.62	19.54

Protein Annotations

KEGG:00071+1.3.3.6	KEGG:00592+1.3.3.6	Gene3D:1.20.140.10	MapMan:11.7.1.8	Gene3D:2.40.110.10	MapMan:5.7.3.2.1
InterPro:Acyl-CoA_oxidase_C	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	ProteinID:CCB57300.1	ncoils:Coil	UniProt:F6HRJ2
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003995	GO:GO:0003997	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006629
GO:GO:0006631	GO:GO:0006635	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016627	GO:GO:0033539	GO:GO:0050660	GO:GO:0055114	GO:GO:0071949	PFAM:PF01756
PANTHER:PTHR10909	PANTHER:PTHR10909:SF369	SUPFAM:SSF47203	SUPFAM:SSF56645	TIGR:TC53265	TIGR:TC59316
TMHMM:TMhelix	UniParc:UPI0002109383	ArrayExpress:VIT_00s0389g00020	EnsemblPlantsGene:VIT_00s0389g00020	EnsemblPlants:VIT_00s0389g00020.t01	SEG:seg

Description

Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F6HRJ2]

Coordinates

chrUn:+:27082538..27090101

Molecular Weight (calculated)

71132.5 Da

IEP (calculated)

7.044

GRAVY (calculated)

-0.023

Length

864 amino acids

Sequence
(BLAST)

001: MEGIDYHEGE RSKAEFDVEE MKIVWAGSRE VFEVSDRMGR LVASDEVNFF VFSFGFLGVF GCSQIVGELG FFSSGFRRSF IFPCVFVCRK VMRKDILDCF
101: GSRRIRSQPL TESFDFVELG FDFCEIKRXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXDSQSD EFVIHSPTLT SSKWWPGGLG KVSTHAVVYA RLITDGQDHG
401: VHGFIVQLRS LEDHLPLPGI TIGDIGMKFG NGGYNSMDNG VLRFDHVRIP RDQMLMRVFQ VTREGKCVQS NVPRQLVYGT MVFVRQTIVS DASSALSRAV
501: CIATRYSVVR RQFGSQNGGP ETQVIDYKTQ QSRLFPLLAS AYAFRFVGQW LKWLYMDVTQ RLQANDFSTL PEAHACTAGL KSLTTSATAD GIEECRKLCG
601: GHGYLCSSGL PELFAVYVPA CTYEGDNIVL LLQVARFLMK TVSQLGSGKQ PVGTTAYMGR VADLMQCCCA VQRAEDWLNP SVILEAFEAR SARMSVACAQ
701: NLSKFANSEE GFAELSADLV EAAVAHCQLI VVSKFIEKLQ EDIPGKGVKR QLEILCNIYA LYLLHKYVGD FLSTSCITPK QASLANEQLR SLYAQARPNA
801: IALVDAFNYT DHYLSSILGC YDGNVYPKLY DAAWKDPLNA SVVPDGYQQY IRPMLKQQLR NARL

Best Arabidopsis Sequence Match ( AT4G16760.2 )
(BLAST)

001: MEGIDHLADE RNKAEFDVED MKIVWAGSRH AFEVFEKSNR ARLSRKELFK STLRKCAHAF KRIIELRLNE EEAGRLRHFI DQPAYVDLHW GMFVPAIKGQ
101: GTEEQQKKWL SLANKMQIIG CYAQTELGHG SNVQGLETTA TFDPKTDEFV IHTPTQTASK WWPGGLGKVS THAVVYARLI TNGKDYGIHG FIVQLRSLED
201: HSPLPNITVG DIGTKMGNGA YNSMDNGFLM FDHVRIPRDQ MLMRLSKVTR EGEYVPSDVP KQLVYGTMVY VRQTIVADAS NALSRAVCIA TRYSAVRRQF
301: GAHNGGIETQ VIDYKTQQNR LFPLLASAYA FRFVGEWLKW LYTDVTERLA ASDFATLPEA HACTAGLKSL TTTATADGIE ECRKLCGGHG YLWCSGLPEL
401: FAVYVPACTY EGDNVVLQLQ VARFLMKTVA QLGSGKVPVG TTAYMGRAAH LLQCRSGVQK AEDWLNPDVV LEAFEARALR MAVTCAKNLS KFENQEQGFQ
501: ELLADLVEAA IAHCQLIVVS KFIAKLEQDI GGKGVKKQLN NLCYIYALYL LHKHLGDFLS TNCITPKQAS LANDQLRSLY TQVRPNAVAL VDAFNYTDHY
601: LNSVLGRYDG NVYPKLFEEA LKDPLNDSVV PDGYQEYLRP VLQQQLRTAR L

Arabidopsis Description

ACX1Peroxisomal acyl-coenzyme A oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65202]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.