Factsheet for PGSC0003DMT400012318

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	nucleus, peroxisome
BaCelLo:	nucleus
EpiLoc:	peroxisome
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g078400.2.1	Tomato	unclear	91.11	93.22
PGSC0003DMT400012322	Potato	peroxisome	83.89	83.89
KRH28148	Soybean	peroxisome	78.46	78.23
KRH57460	Soybean	nucleus	78.31	78.2
KRH16000	Soybean	cytosol, peroxisome	54.37	77.8
CDY42938	Canola	peroxisome	76.66	76.66
Bra040093.1-P	Field mustard	peroxisome	76.51	76.51
CDY59471	Canola	peroxisome	76.51	76.51
GSMUA_Achr7P07440_001	Banana	peroxisome	76.05	75.83
AT4G16760.1	Thale cress	peroxisome	75.75	75.75
AT2G35690.1	Thale cress	peroxisome	73.19	73.19
TraesCS7A01G003900.1	Wheat	peroxisome, unclear	73.49	73.05
TraesCS4A01G494700.1	Wheat	golgi, peroxisome	73.49	73.05
CDX84603	Canola	peroxisome	73.04	73.04
Bra023025.1-P	Field mustard	peroxisome	73.04	73.04
CDX79618	Canola	peroxisome	72.89	72.89
Os06t0103500-01	Rice	peroxisome	73.34	72.8
TraesCS7D01G004400.1	Wheat	peroxisome	73.34	72.8
KXG19087	Sorghum	peroxisome	72.89	72.46
Zm00001d045251_P001	Maize	peroxisome	72.59	72.26
EER87896	Sorghum	peroxisome	72.29	71.96
KRH77335	Soybean	peroxisome	78.92	71.88
KRH04170	Soybean	nucleus	57.68	70.53
Zm00001d045606_P002	Maize	peroxisome	71.99	68.68
HORVU2Hr1G031180.5	Barley	peroxisome	22.59	50.51
VIT_00s0389g00020.t01	Wine grape	nucleus, peroxisome	65.51	50.35
PGSC0003DMT400027351	Potato	cytosol, extracellular	25.3	24.89
PGSC0003DMT400053145	Potato	peroxisome	25.75	24.68
PGSC0003DMT400056247	Potato	mitochondrion	10.69	24.65

Protein Annotations

KEGG:00071+1.3.3.6	KEGG:00592+1.3.3.6	Gene3D:1.10.540.10	Gene3D:1.20.140.10	EntrezGene:102586848	MapMan:11.7.1.8
Gene3D:2.40.110.10	MapMan:5.7.3.2.1	InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:Acyl-CoA_ox_N	InterPro:Acyl-CoA_oxidase	InterPro:Acyl-CoA_oxidase_C
InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003997	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005777	GO:GO:0006629	GO:GO:0006631	GO:GO:0006635	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016627	GO:GO:0050660	GO:GO:0055114	GO:GO:0071949
InterPro:IPR037069	UniProt:M1A128	PFAM:PF01756	PFAM:PF02770	PFAM:PF14749	EnsemblPlantsGene:PGSC0003DMG400004827
PGSC:PGSC0003DMG400004827	EnsemblPlants:PGSC0003DMT400012318	PIRSF:PIRSF000168	PANTHER:PTHR10909	PANTHER:PTHR10909:SF369	SUPFAM:SSF47203
SUPFAM:SSF56645	UniParc:UPI000296A664	RefSeq:XP_006355418.1	:	:	:

Description

Peroxisomal acyl-CoA oxidase 1B [Source:PGSC_GENE;Acc:PGSC0003DMG400004827]

Coordinates

chr8:+:52051597..52055200

Molecular Weight (calculated)

74573.2 Da

IEP (calculated)

6.657

GRAVY (calculated)

-0.245

Length

664 amino acids

Sequence
(BLAST)

001: MERIDYLADE RKKAEFNVDE MKIVWAGSRR AFEVSDYISK LVADDPGFSK EERTMLPRKE LFKNTLRKSA CSWKHIIDLQ LSEEEAERLR YFVDEPAFID
101: SHLGVFIPAI KGQGTKEQLK KWLPLAYKMQ IIGCYAQTEL GHGSNVQGLE TTATFDPQTD EFVMHSPTLT SSKWWPGGLG KVSTHAIVYA RLITDGIDHG
201: INGFIVQLRS LEDHKPLPGI TVGDIGTKFG NGAYNTMDNG VLRFDHVRIP RDQMLMRVAQ VTKDGKYVQS DVPRQLLYVS MVYTRQELVT YASGALSRAV
301: CIATRYSAVR RQFGSQNGGQ EIQVIDYKTQ QSRLFPLLAS AYAFRFVGEW LKWFYTDVTQ RLQANDFSTL PELHATTAGI KSLTTTATAD GIEECRKLCG
401: GHGYLCSSGL PELYAVYVPA CTFEGDNVVL LLQVARFLMK TVSQLSSGKK PTGTITYMGK IEHLMQCHSD VEQAKDWLKP SAILEAFESR AARMSVACAQ
501: SLTKFDNPEE GFQELAPDLV EAALAHSQLI VVSKFIEKLQ QDIPGEGVKQ QLEVLCSIYA LFLLHKHQGD FLATGYITSK QGLFANEQLR ALYTQVRPNA
601: VSLADAFNHT DHFLGSILGR YDGNVYPKLY EAAWKDPLNE SDVPDGFDEY IRPLLKQQLQ TARL

Best Arabidopsis Sequence Match ( AT4G16760.1 )
(BLAST)

001: MEGIDHLADE RNKAEFDVED MKIVWAGSRH AFEVSDRIAR LVASDPVFEK SNRARLSRKE LFKSTLRKCA HAFKRIIELR LNEEEAGRLR HFIDQPAYVD
101: LHWGMFVPAI KGQGTEEQQK KWLSLANKMQ IIGCYAQTEL GHGSNVQGLE TTATFDPKTD EFVIHTPTQT ASKWWPGGLG KVSTHAVVYA RLITNGKDYG
201: IHGFIVQLRS LEDHSPLPNI TVGDIGTKMG NGAYNSMDNG FLMFDHVRIP RDQMLMRLSK VTREGEYVPS DVPKQLVYGT MVYVRQTIVA DASNALSRAV
301: CIATRYSAVR RQFGAHNGGI ETQVIDYKTQ QNRLFPLLAS AYAFRFVGEW LKWLYTDVTE RLAASDFATL PEAHACTAGL KSLTTTATAD GIEECRKLCG
401: GHGYLWCSGL PELFAVYVPA CTYEGDNVVL QLQVARFLMK TVAQLGSGKV PVGTTAYMGR AAHLLQCRSG VQKAEDWLNP DVVLEAFEAR ALRMAVTCAK
501: NLSKFENQEQ GFQELLADLV EAAIAHCQLI VVSKFIAKLE QDIGGKGVKK QLNNLCYIYA LYLLHKHLGD FLSTNCITPK QASLANDQLR SLYTQVRPNA
601: VALVDAFNYT DHYLNSVLGR YDGNVYPKLF EEALKDPLND SVVPDGYQEY LRPVLQQQLR TARL

Arabidopsis Description

ACX1Peroxisomal acyl-coenzyme A oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65202]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.