CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 3
peroxisome 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28148	Soybean	peroxisome	88.89	97.3
KRH16000	Soybean	cytosol, peroxisome	61.04	95.91
KRH57460	Soybean	nucleus	80.25	87.97
Solyc08g078390.2.1	Tomato	nucleus, peroxisome, unclear	75.31	82.68
PGSC0003DMT400012322	Potato	peroxisome	75.31	82.68
CDY59471	Canola	peroxisome	73.94	81.17
CDY42938	Canola	peroxisome	73.8	81.02
Bra040093.1-P	Field mustard	peroxisome	73.66	80.87
KRH04170	Soybean	nucleus	60.22	80.85
AT4G16760.1	Thale cress	peroxisome	73.11	80.27
GSMUA_Achr7P07440_001	Banana	peroxisome	72.43	79.28
PGSC0003DMT400012318	Potato	peroxisome	71.88	78.92
AT2G35690.1	Thale cress	peroxisome	70.78	77.71
CDX79618	Canola	peroxisome	69.96	76.81
Solyc08g078400.2.1	Tomato	unclear	68.31	76.73
CDX84603	Canola	peroxisome	69.68	76.51
Bra023025.1-P	Field mustard	peroxisome	69.68	76.51
Zm00001d045251_P001	Maize	peroxisome	69.68	76.16
KXG19087	Sorghum	peroxisome	69.55	75.9
Os06t0103500-01	Rice	peroxisome	69.27	75.49
TraesCS4A01G494700.1	Wheat	golgi, peroxisome	69.14	75.45
EER87896	Sorghum	peroxisome	69.0	75.41
TraesCS7D01G004400.1	Wheat	peroxisome	69.14	75.34
TraesCS7A01G003900.1	Wheat	peroxisome, unclear	69.0	75.3
Zm00001d045606_P002	Maize	peroxisome	68.04	71.26
VIT_00s0389g00020.t01	Wine grape	nucleus, peroxisome	63.92	53.94
HORVU2Hr1G031180.5	Barley	peroxisome	19.48	47.81
KRH59378	Soybean	nucleus	24.69	26.63
KRH55840	Soybean	nucleus	22.91	24.74
KRH25680	Soybean	nucleus	22.77	24.59

Protein Annotations

KEGG:00071+1.3.3.6	KEGG:00592+1.3.3.6	Gene3D:1.10.540.10	Gene3D:1.20.140.10	EntrezGene:100810829	MapMan:11.7.1.8
Gene3D:2.40.110.10	MapMan:5.7.3.2.1	EMBL:ACUP02000669	InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:Acyl-CoA_ox_N	InterPro:Acyl-CoA_oxidase
InterPro:Acyl-CoA_oxidase_C	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	EnsemblPlantsGene:GLYMA_01G207500	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003995	GO:GO:0003997	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006629	GO:GO:0006631
GO:GO:0006635	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016627
GO:GO:0033539	GO:GO:0050660	GO:GO:0055114	GO:GO:0071949	UniProt:I1J9T7	InterPro:IPR037069
EnsemblPlants:KRH77335	ProteinID:KRH77335	ProteinID:KRH77335.1	PFAM:PF01756	PFAM:PF02770	PFAM:PF14749
PIRSF:PIRSF000168	PANTHER:PTHR10909	PANTHER:PTHR10909:SF369	MetaCyc:PWY-5136	MetaCyc:PWY-6837	MetaCyc:PWY-6920
MetaCyc:PWY-7007	MetaCyc:PWY-7288	MetaCyc:PWY-7291	MetaCyc:PWY-7337	MetaCyc:PWY-7338	MetaCyc:PWY-7340
MetaCyc:PWY-735	MetaCyc:PWY-7574	MetaCyc:PWY-7606	MetaCyc:PWY-7726	MetaCyc:PWY-7854	MetaCyc:PWY-7858
SUPFAM:SSF47203	SUPFAM:SSF56645	UniParc:UPI000295F5A7	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:53941559..53948530

Molecular Weight (calculated)

82021.3 Da

IEP (calculated)

8.262

GRAVY (calculated)

-0.248

Length

729 amino acids

Sequence
(BLAST)

001: MKYEIFSSDS NVITFSSFGT LKTQLNHIKH PLFYSNCCYC NTTQSSFITE TKATSCDIRK TLARMEDSID HLAFERNKAQ FDVDEMKIVW AGSRQDFELS
101: DRISRLVASD PAFRKDDRTT LGRKELFKNT LRKAAYAWKR INELRLNEQE AYKLRSFVDQ PAFTDLHWGM FVPAIQGQGT DEQQQKWLPL AYRMQIIGCY
201: AQTELGHGSN VQGLETTATF DPKTDEFVIH NPTLTSSKWW PGGLGKISTH AVVYARLIIG GEDHGVHGFI VQLRSLDDHL PLSGITIGDI GMKFGNAAYN
301: TMDNGVLRFD HVRIPRNQML MRVSQVTREG KYVHSNVPRQ LVYGTMVNVR QKIVADASVA LSRAVCIATR YSAVRRQFGS HNGGLETQVI DYKTQQARLF
401: PLLASAYAFR FVGEWLKWLY MDVTKRLQAN DFSTLPEAHA CTAGLKSLTT TATADGIEEC RKLCGGHGYL CSSGLPELFA VYVPACTYEG DNIVLLLQVA
501: RYLMKTVSQL GSGNKPVGTT AYMARVEQLM QYHSDVKKAE DWLKPNVVLE AFEARAARMS VACAQNLSKF TNPEEGFQEL AADLVDAAVA HCQLIVVSKF
601: IEKLQQDIPG KGVKKQLEVL CSIYALFLLH KHLGDFLSTG CINPKQGSLA SEQLRNLYSQ VRPNAIALVD AFNYTDHYLG SILGRYDGNV YPKLYEEAWK
701: DPLNDSVVPD GFKEYIQPML KQQLRNARL

Best Arabidopsis Sequence Match ( AT4G16760.1 )
(BLAST)

001: MEGIDHLADE RNKAEFDVED MKIVWAGSRH AFEVSDRIAR LVASDPVFEK SNRARLSRKE LFKSTLRKCA HAFKRIIELR LNEEEAGRLR HFIDQPAYVD
101: LHWGMFVPAI KGQGTEEQQK KWLSLANKMQ IIGCYAQTEL GHGSNVQGLE TTATFDPKTD EFVIHTPTQT ASKWWPGGLG KVSTHAVVYA RLITNGKDYG
201: IHGFIVQLRS LEDHSPLPNI TVGDIGTKMG NGAYNSMDNG FLMFDHVRIP RDQMLMRLSK VTREGEYVPS DVPKQLVYGT MVYVRQTIVA DASNALSRAV
301: CIATRYSAVR RQFGAHNGGI ETQVIDYKTQ QNRLFPLLAS AYAFRFVGEW LKWLYTDVTE RLAASDFATL PEAHACTAGL KSLTTTATAD GIEECRKLCG
401: GHGYLWCSGL PELFAVYVPA CTYEGDNVVL QLQVARFLMK TVAQLGSGKV PVGTTAYMGR AAHLLQCRSG VQKAEDWLNP DVVLEAFEAR ALRMAVTCAK
501: NLSKFENQEQ GFQELLADLV EAAIAHCQLI VVSKFIAKLE QDIGGKGVKK QLNNLCYIYA LYLLHKHLGD FLSTNCITPK QASLANDQLR SLYTQVRPNA
601: VALVDAFNYT DHYLNSVLGR YDGNVYPKLF EEALKDPLND SVVPDGYQEY LRPVLQQQLR TARL

Arabidopsis Description

ACX1Peroxisomal acyl-coenzyme A oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65202]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.