CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome

Predictor Summary:

plastid 1
mitochondrion 4
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57822	Canola	peroxisome	96.59	96.44
Bra015494.1-P	Field mustard	mitochondrion, peroxisome	78.04	91.32
AT1G06310.1	Thale cress	peroxisome	85.46	85.33
CDY10192	Canola	mitochondrion	84.42	84.05
CDY57818	Canola	peroxisome	83.98	83.85
PGSC0003DMT400027351	Potato	cytosol, extracellular	69.14	69.04
KRH25680	Soybean	nucleus	68.84	68.74
KRH55840	Soybean	nucleus	68.69	68.59
Solyc10g008110.2.1	Tomato	nucleus	69.14	68.23
VIT_12s0028g02660.t01	Wine grape	mitochondrion	69.88	68.16
PGSC0003DMT400056247	Potato	mitochondrion	27.6	64.58
HORVU7Hr1G083490.8	Barley	mitochondrion	64.69	63.84
TraesCS7D01G346400.2	Wheat	mitochondrion	64.39	63.64
TraesCS7B01G250400.1	Wheat	mitochondrion	64.39	63.64
TraesCS7A01G339100.1	Wheat	mitochondrion	64.24	63.49
GSMUA_Achr2P15230_001	Banana	peroxisome	63.95	63.48
Os06t0354500-01	Rice	plasma membrane	63.5	62.48
GSMUA_Achr6P05860_001	Banana	peroxisome	63.2	62.37
EES01747	Sorghum	plastid	61.42	60.53
Zm00001d042884_P003	Maize	extracellular	61.42	60.53
CDY08820	Canola	peroxisome	30.56	29.86
CDY14540	Canola	peroxisome	30.42	29.75
CDX81267	Canola	plastid	29.67	29.41
CDY18687	Canola	plastid	29.53	29.26
CDY59471	Canola	peroxisome	24.48	24.85
CDY42938	Canola	peroxisome	24.33	24.7
CDX84603	Canola	peroxisome	24.04	24.4
CDX79618	Canola	peroxisome	23.89	24.25

Protein Annotations

KEGG:00071+1.3.3.6	KEGG:00592+1.3.3.6	Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:5.7.3.2.1	GO:A0A078FAY6
UniProt:A0A078FAY6	InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:Acyl-CoA_oxidase	InterPro:Acyl-CoA_oxidase_C	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C
InterPro:AcylCo_DH/oxidase_C	EnsemblPlants:CDY10194	ProteinID:CDY10194	ProteinID:CDY10194.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003997	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006629	GO:GO:0006631	GO:GO:0006635
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016627	GO:GO:0050660
GO:GO:0055114	GO:GO:0071949	EnsemblPlantsGene:GSBRNA2T00032013001	PFAM:PF00441	PFAM:PF01756	PFAM:PF02770
PIRSF:PIRSF000168	PANTHER:PTHR10909	PANTHER:PTHR10909:SF352	MetaCyc:PWY-5136	MetaCyc:PWY-6837	MetaCyc:PWY-6920
MetaCyc:PWY-7007	MetaCyc:PWY-7288	MetaCyc:PWY-7291	MetaCyc:PWY-7337	MetaCyc:PWY-7338	MetaCyc:PWY-7340
MetaCyc:PWY-735	MetaCyc:PWY-7606	MetaCyc:PWY-7726	SUPFAM:SSF47203	SUPFAM:SSF56645	UniParc:UPI0004EE1B37

Description

BnaC05g04370DAcyl-coenzyme A oxidase [Source:UniProtKB/TrEMBL;Acc:A0A078FAY6]

Coordinates

chrLK032001:+:485759..489505

Molecular Weight (calculated)

75989.4 Da

IEP (calculated)

7.545

GRAVY (calculated)

-0.252

Length

674 amino acids

Sequence
(BLAST)

001: MSENCALRRA NVLANHILQS PPQPSNISLA REACLQYTPP EVNESYGFQV KEMRKLLDGH NLEDRDWLYG IIIQSNLFNR KIRGGKVFVS PDYNETMEQQ
101: REISMKRILH LLEKGVFKGW LTETGPEAEL KKFALYEVCG MYDYSLSAKL GVHFLLWGNA IKFFGTKRHH EKWLKHTEDY LVKGCFAMTE LGHGSNVKGI
201: ETVTTYDPRT EEFVINTPCE SAQKYWIGEA AIHANHAIVI SQLEINETNQ GIHVFIAQIR DQDGNICPNI RIADCGHKIG LNGVDNGRIW FDNLRIPREN
301: LLNSVADVSP DGEYVSAIKN PDQRFGAFLA PLTSGRVTIA SCAIYSAKVG LAVAIRYSLS RRTFSAVATG PEVLLLDYPS HQRRLLPLLA KTYAMSFAAN
401: DMKMMYVKRT PETNKEIHVV SMGLKALLTW HNMRTLQECR EACGGQGVKT ENRVGHLKGD YDVQTTFEGD NNVLMQQVSK ALFAEYVSCK KRNKPFKGLG
501: LEHMNSPLPV LPTQLTSSTL RCSHFQQKNV FCLRERDLLE RYTCEVAELQ ERGESRELSF LLSHQLSEDL SKAFAEKAIL QAVLDAEAKL PAGSIKDVVG
601: LVRSMYALIC MEEDPSFLRY GYHSRDSVGD VRREVSKLCI ELRPHALALV TSFGIPDAFL GPIAFNWIEA NAWS

Best Arabidopsis Sequence Match ( AT1G06310.1 )
(BLAST)

001: MSENVELRRA HILANHILRS PRPSSNPSLT PEVCFQYSPP ELNESYGFEV KEMRKLLDGH NLEERDWLYG LMMQSNLFNP KQRGGQIFVS PDYNQTMEQQ
101: RQISMKRIFY LLEKGVFQGW LTETGPEAEL KKFALYEVCG IYDYSLSAKL GVHFLLWGNA VKFFGTKRHH EKWLKDTEDY VVKGCFAMTE LGHGTNVRGI
201: ETVTTYDPTT EEFVINTPCE SAQKYWIGEA ANHANHAIVI SQLSMNGTNQ GIHVFIAQIR DHDGNTCPNV RIADCGHKIG LNGVDNGRIW FDNLRIPREN
301: LLNSVADVLA DGKYVSSIKD PDQRFGAFLA PLTSGRVTIA SSAIYSAKLG LAVAIRYSLS RRAFSVAANG PEVLLLDYPS HQRRLLPLLA KTYAMSFAVN
401: DLKMIYVKRT PETNKAIHVV SSGFKAVLTW HNMRTLQECR EAVGGQGLKT ENRVGHLKGE YDVQTTFEGD NNVLMQLVSK ALFAEYVSCK KRNKPFKGLG
501: LEHMNSPRPV LPTQLTSSTL RCSQFQKSVF CLRERDLLER FTSEVAELQG RGESREFLFL LNHQLSEDLS KAFTEKAILQ TVLDAEAKLP PGSVKDVLGL
601: VRSMYALISL EEDPSLLRYG HLSRDNVGDV RKEVSKLCGE LRPHALALVA SFGIPDAFLS PIAFNWVEAN AWSSL

Arabidopsis Description

ACX3.2Putative acyl-coenzyme A oxidase 3.2, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q9LMI7]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.