Factsheet for Zm00001d042884_P003

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
peroxisome 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	peroxisome

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d007726_P001
Zm00001d007728_P001
Zm00001d007732_P002
Zm00001d007740_P001
Zm00001d007746_P002
Zm00001d021132_P004
Zm00001d023779_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G06290.1	Zm00001d007726_P001	AT5G65940.1	21798944
AT1G06290.1	Zm00001d007728_P001	AT5G65940.1	21798944
AT1G06290.1	Zm00001d007732_P002	AT5G65940.1	21798944
AT1G06290.1	Zm00001d007740_P001	AT5G65940.1	21798944
AT1G06290.1	Zm00001d007746_P002	AT5G65940.1	21798944
AT1G06290.1	Zm00001d021132_P004	AT5G65940.1	21798944
AT1G06290.1	Zm00001d023779_P001	AT5G65940.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01747	Sorghum	plastid	93.86	93.86
HORVU7Hr1G083490.8	Barley	mitochondrion	82.75	82.87
TraesCS7D01G346400.2	Wheat	mitochondrion	82.6	82.84
TraesCS7B01G250400.1	Wheat	mitochondrion	82.46	82.7
TraesCS7A01G339100.1	Wheat	mitochondrion	82.46	82.7
Os06t0354500-01	Rice	plasma membrane	82.16	82.04
GSMUA_Achr2P15230_001	Banana	peroxisome	68.71	69.22
KRH25680	Soybean	nucleus	65.79	66.67
GSMUA_Achr6P05860_001	Banana	peroxisome	66.08	66.18
KRH55840	Soybean	nucleus	65.2	66.07
VIT_12s0028g02660.t01	Wine grape	mitochondrion	66.08	65.41
PGSC0003DMT400027351	Potato	cytosol, extracellular	64.47	65.33
Solyc10g008110.2.1	Tomato	nucleus	64.47	64.57
CDY57818	Canola	peroxisome	63.16	64.0
Bra015491.1-P	Field mustard	peroxisome	63.16	64.0
AT1G06290.1	Thale cress	mitochondrion	62.87	63.7
CDY10192	Canola	mitochondrion	62.87	63.52
AT1G06310.1	Thale cress	peroxisome	61.11	61.93
CDY57822	Canola	peroxisome	60.67	61.48
CDY10194	Canola	mitochondrion, peroxisome	60.53	61.42
PGSC0003DMT400056247	Potato	mitochondrion	25.58	60.76
Bra015494.1-P	Field mustard	mitochondrion, peroxisome	51.02	60.59
Bra015492.1-P	Field mustard	peroxisome	59.8	60.5
Zm00001d029176_P001	Maize	plastid	19.59	35.73
Zm00001d048890_P002	Maize	endoplasmic reticulum, mitochondrion, peroxisome, plastid	28.66	31.92
Zm00001d003744_P001	Maize	peroxisome	23.98	28.13
Zm00001d045251_P001	Maize	peroxisome	25.44	26.09
Zm00001d052931_P001	Maize	mitochondrion, peroxisome, plasma membrane, plastid	25.0	25.83
Zm00001d045606_P002	Maize	peroxisome	24.56	24.14
Zm00001d018581_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	5.99	21.93

Protein Annotations

KEGG:00071+1.3.3.6	KEGG:00592+1.3.3.6	Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:5.7.3.2.1	UniProt:A0A1D6N7A4
InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:Acyl-CoA_oxidase	InterPro:Acyl-CoA_oxidase_C	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003997	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006629	GO:GO:0006631
GO:GO:0006635	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016627
GO:GO:0050660	GO:GO:0055114	GO:GO:0071949	ProteinID:ONM36467.1	PFAM:PF00441	PFAM:PF01756
PFAM:PF02770	PIRSF:PIRSF000168	PANTHER:PTHR10909	PANTHER:PTHR10909:SF352	SUPFAM:SSF47203	SUPFAM:SSF56645
UniParc:UPI000221A465	EnsemblPlantsGene:Zm00001d042884	EnsemblPlants:Zm00001d042884_P003	EnsemblPlants:Zm00001d042884_T003	SEG:seg	:

Description

Acyl-coenzyme A oxidase

Coordinates

chr3:-:182846767..182851933

Molecular Weight (calculated)

76198.7 Da

IEP (calculated)

7.598

GRAVY (calculated)

-0.105

Length

684 amino acids

Sequence
(BLAST)

001: MDLTSPSPAA RRAAAIARHL AAAAAPIPAS SPLEPSCCLS YVPPESTERP AAFAPADLRL LLDGHDLPTR DWLFRAMEES PLFRSRSSRT GSRVFVAPDF
101: NDGKEGQREA TMRRIAYLNR RGVFRGWLTE DGAAAELRKL ALLDCIAIYD HSLAIKIGVH FFLWGSAIKF LGTKRHHDKW LVATENYDIK GCFAMTELGH
201: GSNVRGIETI ATYDSETREF IINTPCESAQ KYWIGGAANH ATHTIVFCQL HINGRNEGVH AFVAQIRDED GTVLPNIHIA DCGHKIGLNG VDNGRIWFQN
301: IRVPRENLLN LVADVLPDGR YVSMIDNPDQ RFAAFLSPLT LGRVNIAVNS VYISKVSLAI AVRYSLSRRA FSIAPDAPEM LLLDYPSHQR RLLPLLAKVC
401: LMSSAGNFMK NMYVKRTPEM SKDIHIYSSA LKATLTWQNM ITIQECREAC GGQGLKTENR IGIFKSEFDV QSTFEGDNNV LMQQVSKALY AEFLGAQKKQ
501: QPFKGLGLEH LNGSSPVIPD KLTSSILRSS KFQMDLFCLR ERDLLKQFVE EVSLHLAQGE SREKALMLSY QVAEDLARAF TERTILQIFL EDEMNVPSGS
601: LKEVLGLLRS LYVMVNIDES TSFLRYGHLS RDNVALVRKE VLKLCSELRP HALAVVSSFG IPDAFLSPLA FDWIEANALS TGSH

Best Arabidopsis Sequence Match ( AT1G06290.1 )
(BLAST)

001: MSDNRALRRA HVLANHILQS NPPSSNPSLS RELCLQYSPP ELNESYGFDV KEMRKLLDGH NVVDRDWIYG LMMQSNLFNR KERGGKIFVS PDYNQTMEQQ
101: REITMKRIWY LLENGVFKGW LTETGPEAEL RKLALLEVCG IYDHSVSIKV GVHFFLWGNA VKFFGTKRHH EKWLKNTEDY VVKGCFAMTE LGHGSNVRGI
201: ETVTTYDPKT EEFVINTPCE SAQKYWIGGA ANHATHTIVF SQLHINGTNQ GVHAFIAQIR DQDGSICPNI RIADCGHKIG LNGVDNGRIW FDNLRIPREN
301: LLNAVADVSS DGKYVSSIKD PDQRFGAFMA PLTSGRVTIA SSAIYSAKVG LSIAIRYSLS RRAFSVTANG PEVLLLDYPS HQRRLLPLLA KTYAMSFAAN
401: ELKMIYVKRT PETNKAIHVV SSGFKAVLTW HNMHTLQECR EAVGGQGVKT ENLVGQLKGE FDVQTTFEGD NNVLMQQVSK ALFAEYVSCK KRNKPFKGLG
501: LEHMNSPRPV LPTQLTSSTL RCSQFQTNVF CLRERDLLEQ FTSEVAQLQG RGESREFSFL LSHQLAEDLG KAFTEKAILQ TILDAEAKLP TGSVKDVLGL
601: VRSMYALISL EEDPSLLRYG YLSQDNVGDV RREVSKLCGE LRPHALALVT SFGIPDSFLS PIAFNWVEAN AWSSV

Arabidopsis Description

ACX3Acyl-coenzyme A oxidase 3, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:P0CZ23]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.