Factsheet for Bra015491.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
mitochondrion 3
peroxisome 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra031802.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G06290.1	Bra031802.1-P	AT5G65940.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57818	Canola	peroxisome	100.0	100.0
AT1G06290.1	Thale cress	mitochondrion	91.41	91.41
Bra015492.1-P	Field mustard	peroxisome	84.44	84.32
Bra015494.1-P	Field mustard	mitochondrion, peroxisome	69.93	81.94
PGSC0003DMT400027351	Potato	cytosol, extracellular	73.93	73.93
Solyc10g008110.2.1	Tomato	nucleus	74.07	73.21
KRH25680	Soybean	nucleus	71.85	71.85
VIT_12s0028g02660.t01	Wine grape	mitochondrion	73.33	71.64
KRH55840	Soybean	nucleus	71.41	71.41
PGSC0003DMT400056247	Potato	mitochondrion	29.04	68.06
GSMUA_Achr2P15230_001	Banana	peroxisome	66.81	66.42
TraesCS7D01G346400.2	Wheat	mitochondrion	66.37	65.69
TraesCS7B01G250400.1	Wheat	mitochondrion	66.37	65.69
TraesCS7A01G339100.1	Wheat	mitochondrion	66.22	65.54
HORVU7Hr1G083490.8	Barley	mitochondrion	66.22	65.45
GSMUA_Achr6P05860_001	Banana	peroxisome	66.07	65.3
Os06t0354500-01	Rice	plasma membrane	64.89	63.94
EES01747	Sorghum	plastid	64.74	63.89
Zm00001d042884_P003	Maize	extracellular	64.0	63.16
Bra037804.1-P	Field mustard	plastid	29.93	29.71
Bra024355.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plastid	30.22	29.57
Bra040093.1-P	Field mustard	peroxisome	25.33	25.75
Bra023025.1-P	Field mustard	peroxisome	25.19	25.6

Protein Annotations

KEGG:00071+1.3.3.6	KEGG:00592+1.3.3.6	Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:5.7.3.2.1	InterPro:Acyl-CoA_Oxase/DH_cen-dom
InterPro:Acyl-CoA_oxidase	InterPro:Acyl-CoA_oxidase_C	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C	EnsemblPlantsGene:Bra015491
EnsemblPlants:Bra015491.1	EnsemblPlants:Bra015491.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003997
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777
GO:GO:0006629	GO:GO:0006631	GO:GO:0006635	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016627	GO:GO:0050660	GO:GO:0055114	GO:GO:0071949	UniProt:M4DG68
PFAM:PF00441	PFAM:PF01756	PFAM:PF02770	PIRSF:PIRSF000168	PANTHER:PTHR10909	PANTHER:PTHR10909:SF352
SUPFAM:SSF47203	SUPFAM:SSF56645	UniParc:UPI000254513E	SEG:seg	:	:

Description

AT1G06290 (E=0.0) ACX3, ATACX3 | ACX3 (ACYL-COA OXIDASE 3); acyl-CoA oxidase

Coordinates

chrA10:-:1442512..1445888

Molecular Weight (calculated)

75718.8 Da

IEP (calculated)

8.334

GRAVY (calculated)

-0.277

Length

675 amino acids

Sequence
(BLAST)

001: MSENRALQRA HILANHILRS PPLPSSLSLA REVCLQYSPP ELNESYGFDV KEMRRLLDGH NTEDRDWLYG LMMQSNLFNR KERGGKIFVS PDYNQTMEQQ
101: REITMKRIWY LLEKGVYRGW LTDSGPEAEL KKLALLEVCG IYDHSLSIKL GVHFFLWGNA VKFFGTKRHH EKWLKNTEDY VVKGCFAMTE LGHGSNVRGI
201: ETVTTYDPRT GEFVINTPCE SAQKYWIGGA AKHATHTIVF SQLNINGTNQ GVHAFIAQIR DEDGNICPNI RVADCGHKIG LNGVDNGRIW FDNLRIPREN
301: LLNSVADVSP DGEYVSAIKD PDQRFGAFMA PLTSGRVTIA SSAIYSAKVG LAIALRYSLS RRAFSVKANG PEVLLLDYPS HQRRLLPLLA KTYAMSFAAN
401: DLKMIYVKRT PETNKAIHVV SSGLKAVLTW HNMHTLQECR EAVGGQGVKT ENLVGQLKGE FDVQTTFEGD NNVLMQQVSK ALFAEYVSCK KRNKPFRGLG
501: LEHMNSSRPV LPTQLSSSTL RCSQFQKNVF CLRERDLLER FTSEVAQLQG RGESRESSFL VNHELAEDLG KAFTEKAILQ TILDAEAKLP AGSMKDVLGL
601: VRSMYALISI EEDPSFLRYG YLSRDNVGDV RREVSKLCGE LRPHALALVS SFGIPDAFLG PIAFNWVEAN AWSSV

Best Arabidopsis Sequence Match ( AT1G06290.1 )
(BLAST)

001: MSDNRALRRA HVLANHILQS NPPSSNPSLS RELCLQYSPP ELNESYGFDV KEMRKLLDGH NVVDRDWIYG LMMQSNLFNR KERGGKIFVS PDYNQTMEQQ
101: REITMKRIWY LLENGVFKGW LTETGPEAEL RKLALLEVCG IYDHSVSIKV GVHFFLWGNA VKFFGTKRHH EKWLKNTEDY VVKGCFAMTE LGHGSNVRGI
201: ETVTTYDPKT EEFVINTPCE SAQKYWIGGA ANHATHTIVF SQLHINGTNQ GVHAFIAQIR DQDGSICPNI RIADCGHKIG LNGVDNGRIW FDNLRIPREN
301: LLNAVADVSS DGKYVSSIKD PDQRFGAFMA PLTSGRVTIA SSAIYSAKVG LSIAIRYSLS RRAFSVTANG PEVLLLDYPS HQRRLLPLLA KTYAMSFAAN
401: ELKMIYVKRT PETNKAIHVV SSGFKAVLTW HNMHTLQECR EAVGGQGVKT ENLVGQLKGE FDVQTTFEGD NNVLMQQVSK ALFAEYVSCK KRNKPFKGLG
501: LEHMNSPRPV LPTQLTSSTL RCSQFQTNVF CLRERDLLEQ FTSEVAQLQG RGESREFSFL LSHQLAEDLG KAFTEKAILQ TILDAEAKLP TGSVKDVLGL
601: VRSMYALISL EEDPSLLRYG YLSQDNVGDV RREVSKLCGE LRPHALALVT SFGIPDSFLS PIAFNWVEAN AWSSV

Arabidopsis Description

ACX3Acyl-coenzyme A oxidase 3, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:P0CZ23]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.