Factsheet for GSMUA_Achr2P15230_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
mitochondrion 2
peroxisome 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr5P13870_001
GSMUA_Achr5P13890_001
GSMUA_Achr5P13900_001
GSMUA_Achr8P14800_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G06290.1	GSMUA_Achr5P13870_001	AT5G65940.1	21798944
AT1G06290.1	GSMUA_Achr5P13890_001	AT5G65940.1	21798944
AT1G06290.1	GSMUA_Achr5P13900_001	AT5G65940.1	21798944
AT1G06290.1	GSMUA_Achr8P14800_001	AT5G65940.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P05860_001	Banana	peroxisome	80.71	80.23
Os06t0354500-01	Rice	plasma membrane	70.99	70.36
HORVU7Hr1G083490.8	Barley	mitochondrion	69.51	69.11
TraesCS7B01G250400.1	Wheat	mitochondrion	69.37	69.06
TraesCS7D01G346400.2	Wheat	mitochondrion	69.22	68.92
TraesCS7A01G339100.1	Wheat	mitochondrion	69.22	68.92
Zm00001d042884_P003	Maize	extracellular	69.22	68.71
EES01747	Sorghum	plastid	69.22	68.71
VIT_12s0028g02660.t01	Wine grape	mitochondrion	68.78	67.58
KRH25680	Soybean	nucleus	67.16	67.56
PGSC0003DMT400027351	Potato	cytosol, extracellular	66.86	67.26
KRH55840	Soybean	nucleus	66.86	67.26
CDY57818	Canola	peroxisome	66.42	66.81
Bra015491.1-P	Field mustard	peroxisome	66.42	66.81
AT1G06290.1	Thale cress	mitochondrion	66.13	66.52
Solyc10g008110.2.1	Tomato	nucleus	66.86	66.47
CDY10192	Canola	mitochondrion	65.98	66.17
AT1G06310.1	Thale cress	peroxisome	65.24	65.63
Bra015492.1-P	Field mustard	peroxisome	63.77	64.05
CDY57822	Canola	peroxisome	63.62	64.0
CDY10194	Canola	mitochondrion, peroxisome	63.48	63.95
Bra015494.1-P	Field mustard	mitochondrion, peroxisome	53.17	62.67
PGSC0003DMT400056247	Potato	mitochondrion	26.21	61.81
GSMUA_Achr2P22160_001	Banana	peroxisome	30.04	29.52
GSMUA_Achr7P07440_001	Banana	peroxisome	25.48	25.98

Protein Annotations

KEGG:00071+1.3.3.6	KEGG:00592+1.3.3.6	Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:5.7.3.2.1	InterPro:Acyl-CoA_Oxase/DH_cen-dom
InterPro:Acyl-CoA_oxidase	InterPro:Acyl-CoA_oxidase_C	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003997	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006629	GO:GO:0006631	GO:GO:0006635
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016627	GO:GO:0050660
GO:GO:0055114	GO:GO:0071949	EnsemblPlantsGene:GSMUA_Achr2G15230_001	EnsemblPlants:GSMUA_Achr2P15230_001	EnsemblPlants:GSMUA_Achr2T15230_001	UniProt:M0S864
PFAM:PF00441	PFAM:PF01756	PFAM:PF02770	PIRSF:PIRSF000168	PANTHER:PTHR10909	PANTHER:PTHR10909:SF352
SUPFAM:SSF47203	SUPFAM:SSF56645	UniParc:UPI000294B484	SEG:seg	:	:

Description

Acyl-coenzyme A oxidase 3, peroxisomal [Source:GMGC_GENE;Acc:GSMUA_Achr2G15230_001]

Coordinates

chr2:+:16599574..16604414

Molecular Weight (calculated)

75540.8 Da

IEP (calculated)

7.918

GRAVY (calculated)

-0.119

Length

679 amino acids

Sequence
(BLAST)

001: MDPQSAAARH VAVIAGHLNC PSPSAAAPLA LAACLHYDPP ELSEKPPAFD LAALRRVLDG HDLAARDWLF RLMEESPLFC PRRRGDRTFV APDYNQTKEQ
101: QRAVTMRRIE YLLRRGVFEG WITGSGPEAE LRKLAFFECI AIYDHSLSVK LGVTFFLWGG AIRFFGTKRH HDKWLKATED YQVKGCFAMT ELGHGSNVRG
201: IETIAIYDTN TREFVINTPC ESAQKYWIGG AANHATHTII FSQLLINGTS QGIHAFVAQI RDADGNVCPN VRIADCGHKI GLNGVDNGRI WFDNLRVPRE
301: NLLNSVADVL PDGQYVSSIK DKDKRFAAFM APLTFGRVNI AATAVYISKV ALAITVRYAL TRRAFSISAN GPEVLLLDYP SHQWRILPLI AKTCAMSSAA
401: NYLKRLYVKR TPETNKSIHI YSSSLKATLT WHNMRALQEC RKACGGQGLK TENRIGILNG EYDVQSTFEG DNNVLMQQVS KALLAEYLAA EKMKSSFEGL
501: GLEHMNDPCP IIPANLTSCT LRSIKFQLDL LCLRERDLLG RYASEVSQYQ AQGESKQKAM LLSHQLADEL ARAFTERTIL QIFADDEMTQ SAGPLKELLG
601: LLRSMYALIC VEEDASFLRY GYLSLESAAA ARKEVMKLCG DLRPHALSVV SSFGIPDAFL SPIAFDWIQA NSWASLSNE

Best Arabidopsis Sequence Match ( AT1G06290.1 )
(BLAST)

001: MSDNRALRRA HVLANHILQS NPPSSNPSLS RELCLQYSPP ELNESYGFDV KEMRKLLDGH NVVDRDWIYG LMMQSNLFNR KERGGKIFVS PDYNQTMEQQ
101: REITMKRIWY LLENGVFKGW LTETGPEAEL RKLALLEVCG IYDHSVSIKV GVHFFLWGNA VKFFGTKRHH EKWLKNTEDY VVKGCFAMTE LGHGSNVRGI
201: ETVTTYDPKT EEFVINTPCE SAQKYWIGGA ANHATHTIVF SQLHINGTNQ GVHAFIAQIR DQDGSICPNI RIADCGHKIG LNGVDNGRIW FDNLRIPREN
301: LLNAVADVSS DGKYVSSIKD PDQRFGAFMA PLTSGRVTIA SSAIYSAKVG LSIAIRYSLS RRAFSVTANG PEVLLLDYPS HQRRLLPLLA KTYAMSFAAN
401: ELKMIYVKRT PETNKAIHVV SSGFKAVLTW HNMHTLQECR EAVGGQGVKT ENLVGQLKGE FDVQTTFEGD NNVLMQQVSK ALFAEYVSCK KRNKPFKGLG
501: LEHMNSPRPV LPTQLTSSTL RCSQFQTNVF CLRERDLLEQ FTSEVAQLQG RGESREFSFL LSHQLAEDLG KAFTEKAILQ TILDAEAKLP TGSVKDVLGL
601: VRSMYALISL EEDPSLLRYG YLSQDNVGDV RREVSKLCGE LRPHALALVT SFGIPDSFLS PIAFNWVEAN AWSSV

Arabidopsis Description

ACX3Acyl-coenzyme A oxidase 3, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:P0CZ23]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.