Factsheet for TraesCS7D01G346400.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G190800.1
TraesCS1B01G206000.1
TraesCS1D01G194800.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G06290.1	TraesCS1A01G190800.1	AT5G65940.1	21798944
AT1G06290.1	TraesCS1B01G206000.1	AT5G65940.1	21798944
AT1G06290.1	TraesCS1D01G194800.2	AT5G65940.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G250400.1	Wheat	mitochondrion	99.12	99.12
TraesCS7A01G339100.1	Wheat	mitochondrion	98.09	98.09
HORVU7Hr1G083490.8	Barley	mitochondrion	97.65	97.51
Os06t0354500-01	Rice	plasma membrane	86.66	86.28
Zm00001d042884_P003	Maize	extracellular	82.84	82.6
EES01747	Sorghum	plastid	82.4	82.16
GSMUA_Achr2P15230_001	Banana	peroxisome	68.92	69.22
KRH55840	Soybean	nucleus	67.45	68.15
KRH25680	Soybean	nucleus	67.3	68.0
AT1G06290.1	Thale cress	mitochondrion	66.72	67.41
PGSC0003DMT400027351	Potato	cytosol, extracellular	66.57	67.26
VIT_12s0028g02660.t01	Wine grape	mitochondrion	67.6	66.71
GSMUA_Achr6P05860_001	Banana	peroxisome	66.72	66.62
Solyc10g008110.2.1	Tomato	nucleus	66.57	66.47
CDY57818	Canola	peroxisome	65.69	66.37
Bra015491.1-P	Field mustard	peroxisome	65.69	66.37
CDY10192	Canola	mitochondrion	65.54	66.03
PGSC0003DMT400056247	Potato	mitochondrion	27.42	64.93
AT1G06310.1	Thale cress	peroxisome	64.22	64.89
CDY57822	Canola	peroxisome	63.93	64.59
CDY10194	Canola	mitochondrion, peroxisome	63.64	64.39
Bra015492.1-P	Field mustard	peroxisome	63.2	63.76
Bra015494.1-P	Field mustard	mitochondrion, peroxisome	53.81	63.72
TraesCS7D01G225100.1	Wheat	unclear	31.96	31.32
TraesCS7D01G143200.1	Wheat	peroxisome	31.38	30.66
TraesCS7D01G004400.1	Wheat	peroxisome	24.49	24.96

Protein Annotations

KEGG:00071+1.3.3.6	KEGG:00592+1.3.3.6	Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:5.7.3.2.1	InterPro:Acyl-CoA_Oxase/DH_cen-dom
InterPro:Acyl-CoA_oxidase	InterPro:Acyl-CoA_oxidase_C	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003997	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006629	GO:GO:0006631	GO:GO:0006635
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016627	GO:GO:0055114
GO:GO:0071949	PFAM:PF00441	PFAM:PF01756	PFAM:PF02770	PIRSF:PIRSF000168	PANTHER:PTHR10909
PANTHER:PTHR10909:SF352	SUPFAM:SSF47203	SUPFAM:SSF56645	EnsemblPlantsGene:TraesCS7D01G346400	EnsemblPlants:TraesCS7D01G346400.2	SEG:seg

Description

No Description!

Coordinates

chr7D:+:446203722..446215721

Molecular Weight (calculated)

75610.2 Da

IEP (calculated)

7.878

GRAVY (calculated)

-0.089

Length

682 amino acids

Sequence
(BLAST)

001: MDASPTAAAR RAAAIARHLA GLPSGAAAAV AGLQFSPCLS YAPPESSEAP PAFAPMELRA LLDGHHLRER DWAYGAMEES PLFCPRRAGG KVFVSPDYNE
101: GKEGQREATM RRIGYLTRRG VFRGWLTEPG PDAELRKLAL LECLGVYDHS LAIKVGVHFF LWGGAVKFLG TKRHHDKWLL DTENYVIKGC FAMTELGHGS
201: NVRGIETVAT YDSKTGEFVI NTPCESAQKY WIGGAANHAT HTIVFAQLHI NGRNEGVHAF IAQIRDQDEN VLPNIHIADC GHKIGLNGVD NGRIWFNNIR
301: VPRENLLNLV ADVLPDGKYV SMIDNPDQRF AAFLSPLTLG RVNIAVNAVY ISKVGLAIAV RYALSRRAFS ITPDGPEMLL LDYPSHQRRL LPLLAKVCMM
401: SSASNFMKNM YVKRTPEISK AIHVYSSALK ATLTWQNMTT LQECREACGG QGLKTENRVG IFKAEFDVQS TFEGDNNVLL QQVSKALYAE FLTTQRKKKS
501: FKGLGLEHLN GPCPVIPHSL TSVILRSSKF QMDLFCLRER DLLKQFAEEV ARHLAQGESR ERALMLSYQI AEDLARAFTE RTILQIFLED EMNAPAGSLK
601: DVLVLLRSMY VMVCIDESAS FLRYGYLSRD NVTTVRKEVM ILCSELRPHA LAIVGSFGIP DAFLSPLAFD WIEANALSSG SE

Best Arabidopsis Sequence Match ( AT1G06290.1 )
(BLAST)

001: MSDNRALRRA HVLANHILQS NPPSSNPSLS RELCLQYSPP ELNESYGFDV KEMRKLLDGH NVVDRDWIYG LMMQSNLFNR KERGGKIFVS PDYNQTMEQQ
101: REITMKRIWY LLENGVFKGW LTETGPEAEL RKLALLEVCG IYDHSVSIKV GVHFFLWGNA VKFFGTKRHH EKWLKNTEDY VVKGCFAMTE LGHGSNVRGI
201: ETVTTYDPKT EEFVINTPCE SAQKYWIGGA ANHATHTIVF SQLHINGTNQ GVHAFIAQIR DQDGSICPNI RIADCGHKIG LNGVDNGRIW FDNLRIPREN
301: LLNAVADVSS DGKYVSSIKD PDQRFGAFMA PLTSGRVTIA SSAIYSAKVG LSIAIRYSLS RRAFSVTANG PEVLLLDYPS HQRRLLPLLA KTYAMSFAAN
401: ELKMIYVKRT PETNKAIHVV SSGFKAVLTW HNMHTLQECR EAVGGQGVKT ENLVGQLKGE FDVQTTFEGD NNVLMQQVSK ALFAEYVSCK KRNKPFKGLG
501: LEHMNSPRPV LPTQLTSSTL RCSQFQTNVF CLRERDLLEQ FTSEVAQLQG RGESREFSFL LSHQLAEDLG KAFTEKAILQ TILDAEAKLP TGSVKDVLGL
601: VRSMYALISL EEDPSLLRYG YLSQDNVGDV RREVSKLCGE LRPHALALVT SFGIPDSFLS PIAFNWVEAN AWSSV

Arabidopsis Description

ACX3Acyl-coenzyme A oxidase 3, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:P0CZ23]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.