Factsheet for TraesCS7D01G225100.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

peroxisome 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G223500.2	Wheat	peroxisome	97.99	98.13
TraesCS7B01G190300.1	Wheat	peroxisome	97.41	97.98
TraesCS7D01G143200.1	Wheat	peroxisome	91.67	91.4
OQU83808	Sorghum	mitochondrion, peroxisome	80.46	90.61
Os11t0605500-01	Rice	peroxisome	84.63	84.26
HORVU7Hr1G045800.4	Barley	peroxisome	88.07	84.2
Zm00001d048890_P002	Maize	endoplasmic reticulum, mitochondrion, peroxisome, plastid	74.14	84.04
Zm00001d029176_P001	Maize	plastid	41.67	77.33
GSMUA_Achr2P22160_001	Banana	peroxisome	76.15	76.7
CDX81267	Canola	plastid	73.13	74.85
KRH59378	Soybean	nucleus	72.41	74.56
Bra037804.1-P	Field mustard	plastid	72.7	74.41
CDY18687	Canola	plastid	72.7	74.41
CDY14540	Canola	peroxisome	73.42	74.17
AT5G65110.1	Thale cress	peroxisome	73.13	73.55
VIT_00s0662g00010.t01	Wine grape	peroxisome	72.27	73.22
Solyc04g054890.2.1	Tomato	nucleus	72.13	72.97
Bra024355.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plastid	72.27	72.9
CDY08820	Canola	peroxisome	72.13	72.75
PGSC0003DMT400053145	Potato	peroxisome	70.83	71.14
Zm00001d003744_P001	Maize	peroxisome	59.48	71.01
Zm00001d018581_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	17.39	64.71
Zm00001d052931_P001	Maize	mitochondrion, peroxisome, plasma membrane, plastid	53.45	56.19
TraesCS7D01G346400.2	Wheat	mitochondrion	31.32	31.96
TraesCS7D01G004400.1	Wheat	peroxisome	26.29	27.35

Protein Annotations

KEGG:00071+1.3.3.6	KEGG:00592+1.3.3.6	Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:5.7.3.2.1	InterPro:Acyl-CoA_Oxase/DH_cen-dom
InterPro:Acyl-CoA_oxidase	InterPro:Acyl-CoA_oxidase_C	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003997	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006629	GO:GO:0006631	GO:GO:0006635
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016627	GO:GO:0055114
GO:GO:0071949	PFAM:PF00441	PFAM:PF01756	PFAM:PF02770	PIRSF:PIRSF000168	PANTHER:PTHR10909
PANTHER:PTHR10909:SF347	SUPFAM:SSF47203	SUPFAM:SSF56645	EnsemblPlantsGene:TraesCS7D01G225100	EnsemblPlants:TraesCS7D01G225100.1	SEG:seg

Description

No Description!

Coordinates

chr7D:-:185136608..185140816

Molecular Weight (calculated)

77683.1 Da

IEP (calculated)

8.493

GRAVY (calculated)

-0.232

Length

696 amino acids

Sequence
(BLAST)

001: MATMSRSGYG SDDEDSTPAM RRLRRLSLHL LQPSDRPAPE GANSLVPAAC AGRRRAGGLD ADAAALTAYL RGRHRATQDR LYRFFVERPE LHTPVELPMA
101: AHRELCFRQM AALVREAGVR PLSLMADDPD EYFAVMEAVG GLDISLAVKF GVQYSLWGGS IINLGTKKHR EKYFDKIDNL DYPGCFAMTE LHHGSNVQAL
201: QTTATFDSVT DEFIIDTPND GAIKWWIGNS ALHGKFATVF ARLILPLQGK GGEPADMGIH AFIVPIRDLE THAVLPGIEI NDCGHKIGLN GVDNGALRFR
301: SVRIPRDNLL NRFGDVARDG KYTSSLPTIN KRFAATLGEL VGGRVSLAYS SVGILKVAVT IAVRYALLRQ QFGPPKQPEI SVLDYQSHQH KLMPMLASAY
401: AFHFARRYLV DKYSEMKKTN DEDISADVHV LSSGLKSYIT SYTAKSISIC RESCGGHGYA AVNRFGDLRN DHDIFQTFEG DNTVLLQQVA GDLLKQYQQK
501: FKGGTLSVTW NYLRDSMSTY LSQPNPVTAR WEGEDHLRDP KFQLDAFRYR TSRLLHSVAA RLQKHMKTLG GFGAWNRCLN HLLTLAESHV EAVILARFIE
601: AVKSCPDAKT REVLKLVCDL YALDRIWKDI GTYRNVDYVA PNKAKAIHKL VDYLSYQVRL VARELVDAFD LPDEVIRAPI GMQSEAYAQY TQCVGF

Best Arabidopsis Sequence Match ( AT5G65110.1 )
(BLAST)

001: MESRREKNPM TEEESDGLIA ARRIQRLSLH LSPSLTPSPS LPLVQTETCS ARSKKLDVNG EALSLYMRGK HIDIQEKIFD FFNSRPDLQT PIEISKDDHR
101: ELCMNQLIGL VREAGVRPFR YVADDPEKYF AIMEAVGSVD MSLGIKMGVQ YSLWGGSVIN LGTKKHRDKY FDGIDNLDYT GCFAMTELHH GSNVQGLQTT
201: ATFDPLKDEF VIDTPNDGAI KWWIGNAAVH GKFATVFARL ILPTHDSKGV SDMGVHAFIV PIRDMKTHQT LPGVEIQDCG HKVGLNGVDN GALRFRSVRI
301: PRDNLLNRFG DVSRDGTYTS SLPTINKRFG ATLGELVGGR VGLAYASVGV LKISATIAIR YSLLRQQFGP PKQPEVSILD YQSQQHKLMP MLASTYAYHF
401: ATVYLVEKYS EMKKTHDEQL VADVHALSAG LKSYVTSYTA KALSVCREAC GGHGYAAVNR FGSLRNDHDI FQTFEGDNTV LLQQVAADLL KRYKEKFQGG
501: TLTVTWSYLR ESMNTYLSQP NPVTARWEGE DHLRDPKFQL DAFRYRTSRL LQNVAARLQK HSKTLGGFGA WNRCLNHLLT LAESHIETVI LAKFIEAVKN
601: CPDPSAKAAL KLACDLYALD RIWKDIGTYR NVDYVAPNKA KAIHKLTEYL SFQVRNVAKE LVDAFELPDH VTRAPIAMQS DAYSQYTQVV GF

Arabidopsis Description

ACX2Acyl-coenzyme A oxidase [Source:UniProtKB/TrEMBL;Acc:A0A178UA38]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.