Factsheet for Solyc04g054890.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1
peroxisome 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400053145	Potato	peroxisome	96.08	95.38
KRH59378	Soybean	nucleus	81.69	83.14
CDX81267	Canola	plastid	80.52	81.47
VIT_00s0662g00010.t01	Wine grape	peroxisome	81.1	81.22
Bra037804.1-P	Field mustard	plastid	80.23	81.18
CDY18687	Canola	plastid	80.23	81.18
AT5G65110.1	Thale cress	peroxisome	81.54	81.07
CDY14540	Canola	peroxisome	80.23	80.12
OQU83808	Sorghum	mitochondrion, peroxisome	71.51	79.61
Bra024355.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plastid	79.65	79.42
CDY08820	Canola	peroxisome	79.65	79.42
GSMUA_Achr2P22160_001	Banana	peroxisome	77.33	76.99
Zm00001d048890_P002	Maize	endoplasmic reticulum, mitochondrion, peroxisome, plastid	64.97	72.8
Os11t0605500-01	Rice	peroxisome	73.55	72.39
TraesCS7A01G141800.1	Wheat	peroxisome	73.55	72.39
TraesCS7D01G143200.1	Wheat	peroxisome	73.4	72.35
TraesCS7B01G190300.1	Wheat	peroxisome	72.67	72.25
TraesCS7A01G223500.2	Wheat	peroxisome	72.97	72.23
TraesCS7B01G044200.1	Wheat	peroxisome	73.26	72.21
TraesCS7D01G225100.1	Wheat	unclear	72.97	72.13
HORVU7Hr1G029110.2	Barley	mitochondrion	72.38	67.66
HORVU7Hr1G045800.4	Barley	peroxisome	71.37	67.45
Zm00001d029176_P001	Maize	plastid	35.03	64.27
TraesCS4A01G172900.1	Wheat	mitochondrion	19.91	61.16
Zm00001d003744_P001	Maize	peroxisome	51.45	60.72
Zm00001d018581_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	13.08	48.13
Zm00001d052931_P001	Maize	mitochondrion, peroxisome, plasma membrane, plastid	45.49	47.28
Solyc10g008110.2.1	Tomato	nucleus	29.36	29.58
Solyc08g078390.2.1	Tomato	nucleus, peroxisome, unclear	24.56	25.45
Solyc08g078400.2.1	Tomato	unclear	23.84	25.27

Protein Annotations

KEGG:00071+1.3.3.6	KEGG:00592+1.3.3.6	Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:5.7.3.2.1	InterPro:ACO
InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:Acyl-CoA_oxidase	InterPro:Acyl-CoA_oxidase_C	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003995	GO:GO:0003997	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006629
GO:GO:0006631	GO:GO:0006635	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016627	GO:GO:0033539	GO:GO:0050660	GO:GO:0055114	GO:GO:0071949	UniProt:K4BSN7
PFAM:PF00441	PFAM:PF01756	PFAM:PF02770	PIRSF:PIRSF000168	PANTHER:PTHR10909	PANTHER:PTHR10909:SF347
SUPFAM:SSF47203	SUPFAM:SSF56645	EnsemblPlantsGene:Solyc04g054890.2	EnsemblPlants:Solyc04g054890.2.1	UniParc:UPI0002765A46	:

Description

Acyl-coenzyme A oxidase 2, peroxisomal [Source:Projected from Arabidopsis thaliana (AT5G65110) UniProtKB/Swiss-Prot;Acc:O65201]

Coordinates

chr4:-:53359221..53363797

Molecular Weight (calculated)

77403.0 Da

IEP (calculated)

8.711

GRAVY (calculated)

-0.271

Length

688 amino acids

Sequence
(BLAST)

001: MELQKISSKG PQNSEETAEL VNRRINLLTL HLNPVQELEL LRCAGKMKAI KVSTEALSEY MRGKHRDIQE KVFAYFNSRP ELQTPIEISK DEHRELCMKQ
101: LVGLVREGGI RPFRYVVDDP AKYFAIAEAV GSVDMSLGIK MGVQYSLWGG SVINLGTKKH RDKYFDGIDN VDYPGCFAMT ELHHGSNVQG LQTVATFDPL
201: TDEFIIDTPN DGAIKWWIGN AAVHGKFATV FARLMLPTHD TKGVTDMGVH AFIVPIRDMK THKTMPGVEI HDCGHKVGLN GVDNGALRFR SVRIPRDNLL
301: NRFGDVSRDG RYTSSLPTIS KRFAATLGEL VGGRVGLAYS SVGVLKIAVV IATRYSLLRQ QFGPPKQPEV SILDYQSQQH KLMPMLASTY AFHFATLHLV
401: EKYSEMKKSH DEELIGDVHA LSAGLKAYIT SYTAKSLSTC REACGGHGYA AVNRFGILRN DHDIFQTFEG DNTVLLQQVA GLLLKQYREK FRGGTLTVTW
501: NYLRQSMNSY LAQPNPVTAR WESEEHLRNP NFQLDAFRYR TSRLLQSVAI RLQKHSKTLG GFGAWNRCLN HLLTLAESHI ESFILEKFIE AVKNCPDENS
601: RAALKLVCDL YALDRIWNDI GTYRNVDYVA PNKAKAIHKL ADYLCFQVKN IARELVDAFD LPDYVTRAPI GVQTPSEAYT QYTQNVGF

Best Arabidopsis Sequence Match ( AT5G65110.1 )
(BLAST)

001: MESRREKNPM TEEESDGLIA ARRIQRLSLH LSPSLTPSPS LPLVQTETCS ARSKKLDVNG EALSLYMRGK HIDIQEKIFD FFNSRPDLQT PIEISKDDHR
101: ELCMNQLIGL VREAGVRPFR YVADDPEKYF AIMEAVGSVD MSLGIKMGVQ YSLWGGSVIN LGTKKHRDKY FDGIDNLDYT GCFAMTELHH GSNVQGLQTT
201: ATFDPLKDEF VIDTPNDGAI KWWIGNAAVH GKFATVFARL ILPTHDSKGV SDMGVHAFIV PIRDMKTHQT LPGVEIQDCG HKVGLNGVDN GALRFRSVRI
301: PRDNLLNRFG DVSRDGTYTS SLPTINKRFG ATLGELVGGR VGLAYASVGV LKISATIAIR YSLLRQQFGP PKQPEVSILD YQSQQHKLMP MLASTYAYHF
401: ATVYLVEKYS EMKKTHDEQL VADVHALSAG LKSYVTSYTA KALSVCREAC GGHGYAAVNR FGSLRNDHDI FQTFEGDNTV LLQQVAADLL KRYKEKFQGG
501: TLTVTWSYLR ESMNTYLSQP NPVTARWEGE DHLRDPKFQL DAFRYRTSRL LQNVAARLQK HSKTLGGFGA WNRCLNHLLT LAESHIETVI LAKFIEAVKN
601: CPDPSAKAAL KLACDLYALD RIWKDIGTYR NVDYVAPNKA KAIHKLTEYL SFQVRNVAKE LVDAFELPDH VTRAPIAMQS DAYSQYTQVV GF

Arabidopsis Description

ACX2Acyl-coenzyme A oxidase [Source:UniProtKB/TrEMBL;Acc:A0A178UA38]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.