Factsheet for TraesCS4A01G172900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029176_P001	Maize	plastid	63.39	37.87
OQU83808	Sorghum	mitochondrion, peroxisome	70.98	25.73
TraesCS7B01G044200.1	Wheat	peroxisome	77.23	24.79
Zm00001d048890_P002	Maize	endoplasmic reticulum, mitochondrion, peroxisome, plastid	67.41	24.59
TraesCS7D01G143200.1	Wheat	peroxisome	76.34	24.5
TraesCS7A01G141800.1	Wheat	peroxisome	76.34	24.46
TraesCS7A01G223500.2	Wheat	peroxisome	75.0	24.17
Os11t0605500-01	Rice	peroxisome	72.32	23.18
HORVU7Hr1G029110.2	Barley	mitochondrion	75.45	22.96
Zm00001d003744_P001	Maize	peroxisome	58.48	22.47
GSMUA_Achr2P22160_001	Banana	peroxisome	66.07	21.42
CDY18687	Canola	plastid	64.73	21.32
Bra037804.1-P	Field mustard	plastid	64.73	21.32
CDX81267	Canola	plastid	64.29	21.18
CDY14540	Canola	peroxisome	63.84	20.75
KRH59378	Soybean	nucleus	62.5	20.71
VIT_00s0662g00010.t01	Wine grape	peroxisome	63.39	20.67
CDY08820	Canola	peroxisome	63.39	20.58
Bra024355.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plastid	63.39	20.58
Zm00001d052931_P001	Maize	mitochondrion, peroxisome, plasma membrane, plastid	60.27	20.39
AT5G65110.1	Thale cress	peroxisome	62.95	20.38
PGSC0003DMT400053145	Potato	peroxisome	61.61	19.91
Solyc04g054890.2.1	Tomato	nucleus	61.16	19.91
TraesCS7A01G003900.1	Wheat	peroxisome, unclear	37.05	12.43
TraesCS4A01G494700.1	Wheat	golgi, peroxisome	37.05	12.43
TraesCS7A01G339100.1	Wheat	mitochondrion	36.61	12.02
Zm00001d018581_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS4A01G172900.1	EnsemblPlantsGene:TraesCS4A01G172900	Gene3D:1.20.140.10	Gene3D:2.40.110.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016627	GO:GO:0055114	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C
InterPro:AcylCo_DH/oxidase_C	PANTHER:PTHR10909	PANTHER:PTHR10909:SF347	PFAM:PF00441	SUPFAM:SSF47203	SUPFAM:SSF56645
MapMan:5.7.3.2.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:439068221..439068956

Molecular Weight (calculated)

25356.2 Da

IEP (calculated)

7.981

GRAVY (calculated)

-0.247

Length

224 amino acids

Sequence
(BLAST)

001: MTRSPTRAFS QRYSSGPFTD LETQAVLPGI EINDCGYKIG LNVVDSGALR FYSVRIPRDN LLNRFGDVAR DGKYISSLPT INRRFAATLV TIAVRYALLR
101: QQFGLPKESE ISVMDYQSHQ HKLMPMLASA YAFHFSRAYL VDMYSEMKKT NDEDVTDDVH VLSSGLKSYI TSYTAKSIRI CRESCGVHGY PAVNHFGGLW
201: NDHDIFQTFE GDNIVRCSRL LEIS

Best Arabidopsis Sequence Match ( AT5G65110.1 )
(BLAST)

001: MESRREKNPM TEEESDGLIA ARRIQRLSLH LSPSLTPSPS LPLVQTETCS ARSKKLDVNG EALSLYMRGK HIDIQEKIFD FFNSRPDLQT PIEISKDDHR
101: ELCMNQLIGL VREAGVRPFR YVADDPEKYF AIMEAVGSVD MSLGIKMGVQ YSLWGGSVIN LGTKKHRDKY FDGIDNLDYT GCFAMTELHH GSNVQGLQTT
201: ATFDPLKDEF VIDTPNDGAI KWWIGNAAVH GKFATVFARL ILPTHDSKGV SDMGVHAFIV PIRDMKTHQT LPGVEIQDCG HKVGLNGVDN GALRFRSVRI
301: PRDNLLNRFG DVSRDGTYTS SLPTINKRFG ATLGELVGGR VGLAYASVGV LKISATIAIR YSLLRQQFGP PKQPEVSILD YQSQQHKLMP MLASTYAYHF
401: ATVYLVEKYS EMKKTHDEQL VADVHALSAG LKSYVTSYTA KALSVCREAC GGHGYAAVNR FGSLRNDHDI FQTFEGDNTV LLQQVAADLL KRYKEKFQGG
501: TLTVTWSYLR ESMNTYLSQP NPVTARWEGE DHLRDPKFQL DAFRYRTSRL LQNVAARLQK HSKTLGGFGA WNRCLNHLLT LAESHIETVI LAKFIEAVKN
601: CPDPSAKAAL KLACDLYALD RIWKDIGTYR NVDYVAPNKA KAIHKLTEYL SFQVRNVAKE LVDAFELPDH VTRAPIAMQS DAYSQYTQVV GF

Arabidopsis Description

ACX2Acyl-coenzyme A oxidase [Source:UniProtKB/TrEMBL;Acc:A0A178UA38]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.