Factsheet for Zm00001d029176_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G172900.1	Wheat	mitochondrion	37.87	63.39
Zm00001d018581_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	30.93	62.03
Zm00001d048890_P002	Maize	endoplasmic reticulum, mitochondrion, peroxisome, plastid	94.13	57.49
Zm00001d003744_P001	Maize	peroxisome	85.6	55.06
Zm00001d052931_P001	Maize	mitochondrion, peroxisome, plasma membrane, plastid	92.27	52.27
OQU83808	Sorghum	mitochondrion, peroxisome	74.13	44.98
Os11t0605500-01	Rice	peroxisome	78.67	42.2
TraesCS7D01G143200.1	Wheat	peroxisome	77.6	41.69
TraesCS7D01G225100.1	Wheat	unclear	77.33	41.67
TraesCS7A01G223500.2	Wheat	peroxisome	77.07	41.58
TraesCS7A01G141800.1	Wheat	peroxisome	77.33	41.49
TraesCS7B01G044200.1	Wheat	peroxisome	76.8	41.26
TraesCS7B01G190300.1	Wheat	peroxisome	75.73	41.04
HORVU7Hr1G029110.2	Barley	mitochondrion	76.53	38.99
GSMUA_Achr2P22160_001	Banana	peroxisome	70.4	38.21
CDY18687	Canola	plastid	65.87	36.32
Bra037804.1-P	Field mustard	plastid	65.87	36.32
CDX81267	Canola	plastid	65.6	36.18
CDY14540	Canola	peroxisome	66.4	36.14
VIT_00s0662g00010.t01	Wine grape	peroxisome	65.87	35.95
KRH59378	Soybean	nucleus	64.8	35.95
HORVU7Hr1G045800.4	Barley	peroxisome	69.6	35.85
AT5G65110.1	Thale cress	peroxisome	65.6	35.55
Bra024355.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plastid	65.33	35.51
CDY08820	Canola	peroxisome	65.07	35.36
Solyc04g054890.2.1	Tomato	nucleus	64.27	35.03
PGSC0003DMT400053145	Potato	peroxisome	63.2	34.2
Zm00001d042884_P003	Maize	extracellular	35.73	19.59
Zm00001d045251_P001	Maize	peroxisome	28.0	15.74
Zm00001d045606_P002	Maize	peroxisome	27.47	14.8

Protein Annotations

Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:5.7.3.2.1	UniProt:A0A1D6K380	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C
InterPro:AcylCo_DH/oxidase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0008150	GO:GO:0008152
GO:GO:0016627	GO:GO:0050660	GO:GO:0055114	ProteinID:ONL98113.1	PFAM:PF00441	PANTHER:PTHR10909
PANTHER:PTHR10909:SF347	SUPFAM:SSF47203	SUPFAM:SSF56645	UniParc:UPI000843EF05	EnsemblPlantsGene:Zm00001d029176	EnsemblPlants:Zm00001d029176_P001
EnsemblPlants:Zm00001d029176_T001	SEG:seg	:	:	:	:

Description

Ribosomal protein L15

Coordinates

chr1:-:61005081..61007689

Molecular Weight (calculated)

40763.4 Da

IEP (calculated)

9.553

GRAVY (calculated)

-0.045

Length

375 amino acids

Sequence
(BLAST)

001: MATGSAAGEE SSAAARRLRR LSLHLLQPAP ADRHHQPLAL AACGHRVEGG TDVAAALAAY LRGRHRAAQM RLFDFFRARP DLQTPIELPT AAHRDLCYRQ
101: LRTLVREAGV RPLTLMATDP AEYFAVMEAA GGADISLGVK LGVQYRLILP LQGKGGEAAD MGIHAFIVPI RDLETHAVLP GIEINDCGHK IGLNGVDNGA
201: LRFRSVRIPR DNLLNRFGDV SRDGKYTSSL PTINKRFAAT LGELVGGRVG IAYCSVGVLK VAVTIVVRYA LLRHQFGPPK QPEISVLDYQ SHQHKLMPML
301: ASSYAFHFAT VQLVDKYSEM KKTNDEDLIA DVHVLSSGLK AYITSYTAKS ISVCREACGG HGYAAVNRFG HIPNI

Best Arabidopsis Sequence Match ( AT1G06290.1 )
(BLAST)

001: MSDNRALRRA HVLANHILQS NPPSSNPSLS RELCLQYSPP ELNESYGFDV KEMRKLLDGH NVVDRDWIYG LMMQSNLFNR KERGGKIFVS PDYNQTMEQQ
101: REITMKRIWY LLENGVFKGW LTETGPEAEL RKLALLEVCG IYDHSVSIKV GVHFFLWGNA VKFFGTKRHH EKWLKNTEDY VVKGCFAMTE LGHGSNVRGI
201: ETVTTYDPKT EEFVINTPCE SAQKYWIGGA ANHATHTIVF SQLHINGTNQ GVHAFIAQIR DQDGSICPNI RIADCGHKIG LNGVDNGRIW FDNLRIPREN
301: LLNAVADVSS DGKYVSSIKD PDQRFGAFMA PLTSGRVTIA SSAIYSAKVG LSIAIRYSLS RRAFSVTANG PEVLLLDYPS HQRRLLPLLA KTYAMSFAAN
401: ELKMIYVKRT PETNKAIHVV SSGFKAVLTW HNMHTLQECR EAVGGQGVKT ENLVGQLKGE FDVQTTFEGD NNVLMQQVSK ALFAEYVSCK KRNKPFKGLG
501: LEHMNSPRPV LPTQLTSSTL RCSQFQTNVF CLRERDLLEQ FTSEVAQLQG RGESREFSFL LSHQLAEDLG KAFTEKAILQ TILDAEAKLP TGSVKDVLGL
601: VRSMYALISL EEDPSLLRYG YLSQDNVGDV RREVSKLCGE LRPHALALVT SFGIPDSFLS PIAFNWVEAN AWSSV

Arabidopsis Description

ACX3Acyl-coenzyme A oxidase 3, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:P0CZ23]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.