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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid
ChloroP:plastid
MultiLoc:cytosol
PProwler:plastid
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G344000.1
TraesCS1A01G425200.2
TraesCS1B01G357000.1
TraesCS1B01G459600.2
TraesCS1D01G346200.1
TraesCS1D01G434200.2
TraesCS2A01G327600.1
TraesCS2B01G354400.1
TraesCS2D01G335300.1
TraesCS3A01G224200.2
TraesCS3A01G277700.1
TraesCS3B01G253700.2
TraesCS3B01G311900.2
TraesCS3D01G229400.1
TraesCS3D01G278000.1
TraesCS4A01G266600.1
TraesCS4B01G047700.1
TraesCS4D01G047600.1
TraesCS5A01G413300.1
TraesCS5B01G416700.1
TraesCS5D01G422000.1
TraesCS6A01G207600.3
TraesCS6B01G236300.4
TraesCS6D01G191300.1
TraesCS7A01G336000.1
TraesCS7A01G351500.1
TraesCS7B01G247600.1
TraesCS7B01G276600.1
TraesCS7D01G343700.1
TraesCS7D01G371500.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G65940.1 TraesCS4A01G266600.1 AT1G14830.1 21798944
AT5G65940.1 TraesCS4B01G047700.1 AT1G14830.1 21798944
AT5G65940.1 TraesCS4D01G047600.1 AT1G14830.1 21798944
AT5G65940.1 TraesCS2A01G327600.1 AT2G42490.1 21798944
AT5G65940.1 TraesCS2B01G354400.1 AT2G42490.1 21798944
AT5G65940.1 TraesCS2D01G335300.1 AT2G42490.1 21798944
AT5G65940.1 TraesCS6A01G207600.3 AT2G42490.1 21798944
AT5G65940.1 TraesCS6B01G236300.4 AT2G42490.1 21798944
AT5G65940.1 TraesCS6D01G191300.1 AT2G42490.1 21798944
AT5G65940.1 TraesCS5A01G413300.1 AT2G42790.1 21798944
AT5G65940.1 TraesCS5B01G416700.1 AT2G42790.1 21798944
AT5G65940.1 TraesCS5D01G422000.1 AT2G42790.1 21798944
AT5G65940.1 TraesCS1A01G425200.2 AT4G01090.1 21798944
AT5G65940.1 TraesCS1B01G459600.2 AT4G01090.1 21798944
AT5G65940.1 TraesCS1D01G434200.2 AT4G01090.1 21798944
AT5G65940.1 TraesCS3A01G224200.2 AT4G01090.1 21798944
AT5G65940.1 TraesCS3B01G253700.2 AT4G01090.1 21798944
AT5G65940.1 TraesCS3D01G229400.1 AT4G01090.1 21798944
AT5G65940.1 TraesCS7A01G336000.1 AT4G01090.1 21798944
AT5G65940.1 TraesCS7A01G351500.1 AT4G01090.1 21798944
AT5G65940.1 TraesCS7B01G247600.1 AT4G01090.1 21798944
AT5G65940.1 TraesCS7B01G276600.1 AT4G01090.1 21798944
AT5G65940.1 TraesCS7D01G343700.1 AT4G01090.1 21798944
AT5G65940.1 TraesCS7D01G371500.1 AT4G01090.1 21798944
AT5G65940.1 TraesCS1A01G344000.1 AT5G56630.1 21798944
AT5G65940.1 TraesCS1B01G357000.1 AT5G56630.1 21798944
AT5G65940.1 TraesCS1D01G346200.1 AT5G56630.1 21798944
AT5G65940.1 TraesCS3A01G277700.1 AT5G56630.1 21798944
AT5G65940.1 TraesCS3B01G311900.2 AT5G56630.1 21798944
AT5G65940.1 TraesCS3D01G278000.1 AT5G56630.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G194800.2 Wheat cytosol 96.85 96.85
TraesCS1A01G190800.1 Wheat plastid 98.16 95.41
HORVU1Hr1G049960.6 Barley mitochondrion 94.49 85.31
EER91893 Sorghum cytosol 80.31 79.27
Zm00001d021132_P004 Maize extracellular 79.27 74.75
Zm00001d007726_P001 Maize peroxisome 47.77 74.29
Zm00001d023779_P001 Maize extracellular 71.92 70.98
KXG29172 Sorghum peroxisome 71.65 70.54
Zm00001d007746_P002 Maize peroxisome 34.91 70.0
OQU84058 Sorghum mitochondrion 74.28 69.02
PGSC0003DMT400004567 Potato extracellular 23.1 66.67
VIT_15s0045g01170.t01 Wine grape cytosol 24.67 64.38
PGSC0003DMT400066414 Potato cytosol 28.87 64.33
GSMUA_Achr5P13900_001 Banana cytosol 52.49 64.1
Solyc01g080930.2.1 Tomato cytosol 64.04 63.71
AT5G65940.1 Thale cress peroxisome 62.73 63.23
KRH07311 Soybean nucleus 64.04 63.05
VIT_09s0002g07160.t01 Wine grape mitochondrion, peroxisome, plastid 61.15 62.97
CDY57769 Canola peroxisome 61.42 62.73
GSMUA_Achr8P14800_001 Banana cytosol 65.35 62.72
AT2G30660.1 Thale cress peroxisome 62.2 62.7
PGSC0003DMT400066409 Potato cytosol 22.83 62.59
GSMUA_Achr5P13870_001 Banana cytosol 64.57 62.28
Bra031802.1-P Field mustard cytosol 61.42 62.23
CDY55104 Canola cytosol 61.42 62.23
Solyc01g108800.2.1 Tomato cytoskeleton, cytosol, peroxisome 61.68 62.01
Os12t0264500-02 Rice endoplasmic reticulum 82.68 61.4
Zm00001d007740_P001 Maize peroxisome 60.63 61.27
PGSC0003DMT400066411 Potato nucleus 23.36 60.96
AT2G30650.1 Thale cress peroxisome 59.58 60.05
CDY31775 Canola peroxisome 60.1 59.79
Solyc01g094090.2.1 Tomato cytosol 51.44 59.57
PGSC0003DMT400000043 Potato cytosol, mitochondrion, peroxisome 41.47 59.4
CDX97894 Canola peroxisome 59.84 58.76
PGSC0003DMT400000054 Potato cytosol 59.06 58.59
Bra018392.1-P Field mustard cytosol 56.43 57.8
Bra018395.1-P Field mustard cytosol 56.43 57.64
CDY62818 Canola peroxisome 60.37 57.36
Bra039968.1-P Field mustard peroxisome 59.58 56.89
CDY31769 Canola peroxisome 59.84 56.86
CDY45442 Canola mitochondrion 49.08 56.5
Zm00001d007732_P002 Maize extracellular 42.26 56.49
PGSC0003DMT400066419 Potato cytosol 35.43 56.25
PGSC0003DMT400004521 Potato cytosol 34.38 55.98
PGSC0003DMT400066424 Potato cytosol, nucleus, plastid 9.97 55.88
Bra039975.1-P Field mustard peroxisome 56.43 55.84
CDY45439 Canola plastid 55.91 53.92
PGSC0003DMT400004585 Potato extracellular 37.53 53.56
Zm00001d007728_P001 Maize cytosol 19.68 52.82
CDY71268 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 20.47 52.35
VIT_15s0045g01190.t01 Wine grape cytosol, nucleus, peroxisome 47.24 46.04
GSMUA_Achr5P13890_001 Banana nucleus 19.16 45.62
TraesCS1B01G224200.1 Wheat mitochondrion 45.14 42.16
TraesCS3B01G325800.1 Wheat cytosol 37.01 36.62
Solyc01g108790.1.1 Tomato nucleus 15.75 34.09
TraesCS7B01G257500.1 Wheat mitochondrion, plastid 32.55 29.52
Protein Annotations
EnsemblPlants:TraesCS1B01G206000.1EnsemblPlantsGene:TraesCS1B01G206000Gene3D:3.90.226.40GO:GO:0003674GO:GO:0003824GO:GO:0003860
GO:GO:0016787InterPro:ClpP/crotonase-like_dom_sfInterPro:HIBYL-CoA-HPANTHER:PTHR43176PFAM:PF16113SUPFAM:SSF52096
TIGR:cd06558MapMan:4.2.7.4MapMan:4.2.7.6.1:::
Description
No Description!
Coordinates
chr1B:-:372147083..372155044
Molecular Weight (calculated)
41873.5 Da
IEP (calculated)
7.998
GRAVY (calculated)
-0.099
Length
381 amino acids
Sequence
(BLAST)
001: MASPASGDSD QVLVEANGST RTLVLNRPKQ LNALSSAMVT GLLKCFTSYE EENTVKLLIV KGKGRAFCAG GDVAEVAQSI NNDTWKYGAD FFHTEFLLNY
101: IIATYSKPQV SLLTGIVMGG GAGVSIHGRF RVATENTVFA MPETALGLFP DIGASYFLSR LPGFYGEYVG LTGARLDGAE MLACGLATHF VPLNRMSLLE
201: ESLKKVDTSD PFAICGIIDQ FSQQPSVKGS SAMNRMEIIN RCFSKRTVEE IISALEQEAP SMADKLVTAA IHSLRKASPT SLKISLASIR EGRLQTVGEC
301: LRREYRMVCH VMRGDFSRDF FEGCRAILVD KDRNPKWMPP TLDKVHDGVV AKYFSKVDDP QWEDLNLPTR PSHGRRIVPK L
Best Arabidopsis Sequence Match ( AT5G65940.4 )
(BLAST)
001: MAVEMASQSQ VLVEEKSSVR ILTLNRPKQL NALSFHMISR LLQLFLAFEE DPSVKLVILK GHGRAFCAGG DVAAVVRDIN QGNWRLGANY FSSEYMLNYV
101: MATYSKAQVS ILNGIVMGGG AGVSVHGRFR IATENTVFAM PETALGLFPD VGASYFLSRL PGFFGEYVGL TGARLDGAEM LACGLATHFV PSTRLTALEA
201: DLCRINSNDP TFASTILDAY TQHPRLKQQS AYRRLDVIDR CFSRRTVEEI ISALEREATQ EADGWISATI QALKKGSPAS LKISLRSIRE GRLQGVGQCL
301: IREYRMVCHV MKGEISKDFV EGCRAILVDK DKNPKWEPRR LEDMKDSMVE QYFERVERED DLKLPPRNNL PALGIAKL
Arabidopsis Description
CHY13-hydroxyisobutyryl-CoA hydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKJ1]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.