Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G291100.1 | Wheat | cytosol | 96.62 | 96.62 |
| TraesCS3D01G290900.1 | Wheat | cytosol | 82.6 | 95.5 |
| HORVU3Hr1G072100.2 | Barley | cytosol | 94.81 | 93.59 |
| EES03617 | Sorghum | cytosol | 85.45 | 85.9 |
| Os01t0752200-01 | Rice | plasma membrane | 86.49 | 85.6 |
| Zm00001d043490_P001 | Maize | cytosol, extracellular | 85.19 | 85.42 |
| Bra030657.1-P | Field mustard | cytosol | 65.45 | 67.02 |
| Solyc12g011160.1.1 | Tomato | cytosol | 66.75 | 66.93 |
| PGSC0003DMT400020300 | Potato | cytosol | 66.49 | 66.67 |
| CDX86518 | Canola | cytosol | 65.19 | 65.54 |
| CDY15584 | Canola | cytosol | 64.42 | 65.44 |
| AT1G06550.1 | Thale cress | cytosol | 64.94 | 64.6 |
| VIT_12s0028g00590.t01 | Wine grape | cytosol | 64.68 | 64.01 |
| CDY49269 | Canola | extracellular, mitochondrion, nucleus, plastid | 36.88 | 63.11 |
| KRH46020 | Soybean | vacuole | 64.16 | 62.06 |
| KRG98957 | Soybean | nucleus | 64.42 | 61.85 |
| Solyc07g043690.1.1 | Tomato | cytosol | 29.09 | 58.03 |
| GSMUA_Achr9P06670_001 | Banana | plastid | 70.65 | 57.63 |
| PGSC0003DMT400054311 | Potato | cytosol | 23.64 | 57.23 |
| Bra030656.1-P | Field mustard | cytosol | 53.51 | 57.06 |
| PGSC0003DMT400079108 | Potato | cytosol | 50.91 | 56.98 |
| CDY15583 | Canola | cytosol | 54.03 | 56.37 |
| PGSC0003DMT400041136 | Potato | cytosol | 50.65 | 56.2 |
| PGSC0003DMT400069137 | Potato | cytosol, mitochondrion | 41.04 | 55.83 |
| Solyc06g054520.1.1 | Tomato | cytosol | 59.74 | 55.83 |
| CDY15581 | Canola | cytosol | 39.22 | 55.31 |
| Solyc07g043680.2.1 | Tomato | cytosol | 56.62 | 54.77 |
| PGSC0003DMT400057075 | Potato | cytosol, plastid | 55.58 | 53.5 |
| Solyc07g044710.1.1 | Tomato | plastid | 54.29 | 53.05 |
| CDX86519 | Canola | extracellular | 26.23 | 51.01 |
| Solyc07g044720.1.1 | Tomato | plastid | 54.81 | 50.12 |
| Solyc07g044730.2.1 | Tomato | endoplasmic reticulum, vacuole | 54.81 | 49.41 |
| PGSC0003DMT400065713 | Potato | cytosol, mitochondrion | 28.57 | 45.83 |
| Solyc07g044740.1.1 | Tomato | cytosol | 14.81 | 43.85 |
| Bra030655.1-P | Field mustard | extracellular | 17.4 | 37.43 |
| TraesCS1B01G224200.1 | Wheat | mitochondrion | 39.22 | 37.01 |
| TraesCS1B01G206000.1 | Wheat | cytosol | 36.62 | 37.01 |
| TraesCS7B01G257500.1 | Wheat | mitochondrion, plastid | 29.35 | 26.9 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G325800.1 | EnsemblPlantsGene:TraesCS3B01G325800 | Gene3D:3.90.226.40 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003860 |
| GO:GO:0008150 | GO:GO:0009628 | GO:GO:0016787 | GO:GO:0080167 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:HIBYL-CoA-H |
| PANTHER:PTHR43176 | PANTHER:PTHR43176:SF2 | PFAM:PF16113 | SEG:seg | SUPFAM:SSF52096 | TIGR:cd06558 |
| MapMan:50.3.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:526695087..526698821
Molecular Weight (calculated)
42848.1 Da
IEP (calculated)
5.338
GRAVY (calculated)
-0.270
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQEQPNPDE VVLGQEINGA RVVTLNRPRQ LNGINDRVVY ILAQLLEKWE KDDDAKLVIF KGAGRAFSAG GDLKMFYEGR SSDDSCLEVV YRMYWLCYHI
101: HTYKKTMVAL VNGLVMGGGA AMVAPLKFAV VTEKTVFATP EASVGLHTDC SFSYIHSRLP GYLGEYLALT GARLNAKEMI AAGLATHFVH SEKLEDLEKQ
201: LLNLNTGDES AVRAVLEEFS TDVQLDQESI LNKLSTIDKC FSAETVEEIL KALDSEVSVD GNQWIAPVLK SMRRSSPTGL KITLRSVREG RKQSLQECLN
301: KEFGLTMNIL RSVITGDVYE GIRALSIDKD NAPKWSPATI EEVKNEDIDR VFKPFSSGHE LQVPSDDSNR WSGKYEHTVY AKSSQ
101: HTYKKTMVAL VNGLVMGGGA AMVAPLKFAV VTEKTVFATP EASVGLHTDC SFSYIHSRLP GYLGEYLALT GARLNAKEMI AAGLATHFVH SEKLEDLEKQ
201: LLNLNTGDES AVRAVLEEFS TDVQLDQESI LNKLSTIDKC FSAETVEEIL KALDSEVSVD GNQWIAPVLK SMRRSSPTGL KITLRSVREG RKQSLQECLN
301: KEFGLTMNIL RSVITGDVYE GIRALSIDKD NAPKWSPATI EEVKNEDIDR VFKPFSSGHE LQVPSDDSNR WSGKYEHTVY AKSSQ
001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
Arabidopsis Description
3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.