Factsheet for PGSC0003DMT400069137

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 3
plastid 1
peroxisome 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g044740.1.1	Tomato	cytosol	34.98	76.15
Solyc07g044710.1.1	Tomato	plastid	91.52	65.74
Solyc07g044730.2.1	Tomato	endoplasmic reticulum, vacuole	94.7	62.76
Solyc07g044720.1.1	Tomato	plastid	92.23	62.0
PGSC0003DMT400054311	Potato	cytosol	34.63	61.64
PGSC0003DMT400065713	Potato	cytosol, mitochondrion	49.12	57.92
PGSC0003DMT400041136	Potato	cytosol	70.67	57.64
PGSC0003DMT400057075	Potato	cytosol, plastid	78.45	55.5
PGSC0003DMT400079108	Potato	cytosol	66.43	54.65
CDY15581	Canola	cytosol	52.65	54.58
PGSC0003DMT400020300	Potato	cytosol	68.2	50.26
KRH46020	Soybean	vacuole	68.2	48.49
CDX86519	Canola	extracellular	33.57	47.98
Bra030657.1-P	Field mustard	cytosol	63.6	47.87
TraesCS3D01G290900.1	Wheat	cytosol	55.83	47.45
KRG98957	Soybean	nucleus	67.14	47.38
VIT_12s0028g00590.t01	Wine grape	cytosol	64.31	46.79
CDX86518	Canola	cytosol	63.25	46.74
AT1G06550.1	Thale cress	cytosol	63.6	46.51
CDY15584	Canola	cytosol	61.84	46.17
CDY15583	Canola	cytosol	59.01	45.26
Bra030656.1-P	Field mustard	cytosol	57.6	45.15
EES03617	Sorghum	cytosol	59.36	43.86
Zm00001d043490_P001	Maize	cytosol, extracellular	59.36	43.75
PGSC0003DMT400004567	Potato	extracellular	20.14	43.18
PGSC0003DMT400066411	Potato	nucleus	21.91	42.47
Os01t0752200-01	Rice	plasma membrane	56.54	41.13
TraesCS3B01G325800.1	Wheat	cytosol	55.83	41.04
TraesCS3A01G291100.1	Wheat	cytosol	55.48	40.78
HORVU3Hr1G072100.2	Barley	cytosol	55.12	40.0
PGSC0003DMT400000043	Potato	cytosol, mitochondrion, peroxisome	37.46	39.85
PGSC0003DMT400066409	Potato	cytosol	19.43	39.57
PGSC0003DMT400004521	Potato	cytosol	31.45	38.03
Bra030655.1-P	Field mustard	extracellular	23.67	37.43
PGSC0003DMT400004585	Potato	extracellular	34.63	36.7
PGSC0003DMT400066414	Potato	cytosol	21.91	36.26
GSMUA_Achr9P06670_001	Banana	plastid	60.07	36.02
CDY49269	Canola	extracellular, mitochondrion, nucleus, plastid	28.62	36.0
PGSC0003DMT400043000	Potato	cytosol	24.73	35.9
PGSC0003DMT400066424	Potato	cytosol, nucleus, plastid	8.48	35.29
PGSC0003DMT400000054	Potato	cytosol	43.11	31.77
PGSC0003DMT400066419	Potato	cytosol	20.14	23.75

Protein Annotations

EnsemblPlants:PGSC0003DMT400069137	EnsemblPlantsGene:PGSC0003DMG400026895	Gene3D:3.90.226.40	GO:GO:0003674	GO:GO:0003824	GO:GO:0003860
GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PANTHER:PTHR43176:SF2	PFAM:PF16113
PGSC:PGSC0003DMG400026895	SEG:seg	SUPFAM:SSF52096	UniParc:UPI00029670CE	UniProt:M1CJZ6	MapMan:50.3.1

Description

3-hydroxyisobutyryl-CoA hydrolase 5 [Source:PGSC_GENE;Acc:PGSC0003DMG400026895]

Coordinates

chr00:+:36788838..36790759

Molecular Weight (calculated)

32267.0 Da

IEP (calculated)

7.284

GRAVY (calculated)

-0.333

Length

283 amino acids

Sequence
(BLAST)

001: MYWLCYHIHT YKKPHIALVH GMSVGGGASL MAPMKFSVVT EKAFSSTPET NIGFHPDCGF SYMLPRLPGR LGEYLGLTGE KLKGKEVVAA GLATHFVPSQ
101: KLFQLEKRLL SIKSGDEDTI RSVINEFSTN IHIDERSILN KLSIINECFS KDSVEEIIES FEAEASRKGN DWIMAVLKTL KKASPIALKI TLRSIREGRT
201: QTISECLRRE FRISMNIQRA IISGDFYEGI RAQIIDKDKS PKWNPSTLDK VHDDQLDLIF KPFEDHDLEL QIPVKEEEEY RYK

Best Arabidopsis Sequence Match ( AT4G31810.1 )
(BLAST)

001: MQTVKALRRV SEPLQWVRSV SYGRRFSALP NYSASDADFE DQVLVEGKAK SRAAILNNPS SLNALSAPMV GRLKRLYESW EENPAISFVL MKGSGKTFCS
101: GADVLSLYHS INEGNTEESK LFFENLYKFV YLQGTYLKPN IAIMDGVTMG CGGGISLPGM FRVATDKTVL AHPEVQIGFH PDAGASYYLS RLPGYLGEYL
201: ALTGQKLNGV EMIACGLATH YCLNARLPLI EERIGKLLTD DPAVIEDSLA QYGDLVYPDS SSVLHKIELI DKYFGLDTVE EIIEAMENEA ANSCNEWCKK
301: TLKQIKEASP LSLKITLQSI REGRFQTLDQ CLTHEYRISI CGVSKVVSGD FCEGIRARLV DKDFAPKWDP PRLEDVSKDM VDCYFTPASE LDDSDSELKL
401: PTAQREPYF

Arabidopsis Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.