Factsheet for TraesCS3D01G290900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G291100.1	Wheat	cytosol	96.4	83.38
TraesCS3B01G325800.1	Wheat	cytosol	95.5	82.6
HORVU3Hr1G072100.2	Barley	cytosol	94.59	80.77
Os01t0752200-01	Rice	plasma membrane	86.19	73.78
EES03617	Sorghum	cytosol	84.38	73.37
Zm00001d043490_P001	Maize	cytosol, extracellular	84.38	73.18
Solyc12g011160.1.1	Tomato	cytosol	66.97	58.07
Bra030657.1-P	Field mustard	cytosol	65.47	57.98
PGSC0003DMT400020300	Potato	cytosol	66.37	57.55
Solyc07g043690.1.1	Tomato	cytosol	33.33	57.51
CDX86518	Canola	cytosol	65.47	56.92
CDY15584	Canola	cytosol	64.56	56.73
PGSC0003DMT400069137	Potato	cytosol, mitochondrion	47.45	55.83
AT1G06550.1	Thale cress	cytosol	64.56	55.56
CDY15581	Canola	cytosol	45.35	55.31
VIT_12s0028g00590.t01	Wine grape	cytosol	63.66	54.5
KRH46020	Soybean	vacuole	63.96	53.52
KRG98957	Soybean	nucleus	63.96	53.12
PGSC0003DMT400054311	Potato	cytosol	24.62	51.57
PGSC0003DMT400079108	Potato	cytosol	52.85	51.16
CDY49269	Canola	extracellular, mitochondrion, nucleus, plastid	34.23	50.67
Bra030656.1-P	Field mustard	cytosol	54.35	50.14
CDX86519	Canola	extracellular	29.73	50.0
CDY15583	Canola	cytosol	54.95	49.59
GSMUA_Achr9P06670_001	Banana	plastid	69.67	49.15
PGSC0003DMT400041136	Potato	cytosol	50.75	48.7
Solyc06g054520.1.1	Tomato	cytosol	59.76	48.3
Solyc07g043680.2.1	Tomato	cytosol	57.36	47.99
PGSC0003DMT400057075	Potato	cytosol, plastid	57.36	47.75
Solyc07g044710.1.1	Tomato	plastid	55.26	46.7
Solyc07g044720.1.1	Tomato	plastid	55.86	44.18
Solyc07g044730.2.1	Tomato	endoplasmic reticulum, vacuole	56.16	43.79
Solyc07g044740.1.1	Tomato	cytosol	16.82	43.08
Bra030655.1-P	Field mustard	extracellular	20.12	37.43
PGSC0003DMT400065713	Potato	cytosol, mitochondrion	25.83	35.83
TraesCS1D01G194800.2	Wheat	cytosol	38.44	33.6
TraesCS1D01G213600.1	Wheat	mitochondrion	39.94	32.6
TraesCS7D01G352500.3	Wheat	mitochondrion	30.03	24.15

Protein Annotations

EnsemblPlants:TraesCS3D01G290900.1	EnsemblPlantsGene:TraesCS3D01G290900	Gene3D:3.90.226.40	GO:GO:0003674	GO:GO:0003824	GO:GO:0003860
GO:GO:0008150	GO:GO:0009628	GO:GO:0016787	GO:GO:0080167	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H
PANTHER:PTHR43176	PANTHER:PTHR43176:SF2	PFAM:PF16113	SEG:seg	SUPFAM:SSF52096	TIGR:cd06558
MapMan:50.3.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:400993952..400997041

Molecular Weight (calculated)

36882.9 Da

IEP (calculated)

5.854

GRAVY (calculated)

-0.252

Length

333 amino acids

Sequence
(BLAST)

001: MNVRFVGQQG AGRAFSAGGD LKMFYEGRSS DDSCLEVVYR MYWLCYHIHT YKKTTVALVN GLVMGGGAAM VAPLKFAVVT EKTVFATPEA SVGLHTDCSF
101: SYIHSRLPGY LGEYLALTGA RLNAKEMIAA GLATHFVHSE KLEDLEKQLL NLNTGDESAV RAVIEEFSTD VQLDQESILN KLSTIDKCFS AETVEEILKA
201: LDSEVSVDGN QWIAPVLKSM RRSSPTGLKI TLRSVREGRK QSLQECLKKE FGLTMNILRS VITGDVYEGI RALSIDKDNA PKWSPATVEE VKNEDIDRVF
301: EPFTSGHELQ VPSDDSNRWS GKHEHTVYAK SSQ

Best Arabidopsis Sequence Match ( AT1G06550.1 )
(BLAST)

001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG

Arabidopsis Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.