Factsheet for TraesCS7D01G352500.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G370500.3	Wheat	mitochondrion, plastid	97.58	95.96
TraesCS7B01G257500.1	Wheat	mitochondrion, plastid	96.38	95.0
KXG20277	Sorghum	plastid	85.02	82.44
HORVU7Hr1G085310.1	Barley	peroxisome	88.89	81.96
Os06t0594100-01	Rice	mitochondrion	85.51	81.57
Solyc07g022880.2.1	Tomato	cytosol	26.57	76.39
GSMUA_Achr7P08560_001	Banana	cytosol	69.57	75.99
GSMUA_Achr6P00740_001	Banana	cytosol	68.6	75.33
Zm00001d046456_P009	Maize	plastid	79.47	73.6
Bra010664.1-P	Field mustard	cytosol	36.23	73.17
GSMUA_Achr7P13260_001	Banana	cytosol	63.53	70.32
KRH60315	Soybean	nucleus	67.87	68.87
CDY64934	Canola	cytosol	63.28	68.77
KRH41609	Soybean	nucleus	67.39	68.38
VIT_11s0016g04290.t01	Wine grape	mitochondrion	71.5	65.63
AT4G13360.1	Thale cress	mitochondrion	64.98	63.9
CDY01126	Canola	mitochondrion, plastid	64.49	63.27
Bra032700.1-P	Field mustard	plastid	64.49	63.12
AT3G24360.1	Thale cress	plastid	63.28	62.68
CDX94817	Canola	mitochondrion, plastid	62.8	61.47
CDX93011	Canola	plastid	62.56	61.23
Bra001946.1-P	Field mustard	plastid	61.84	60.52
Solyc05g018410.1.1	Tomato	plastid	43.72	60.33
TraesCS1D01G194800.2	Wheat	cytosol	29.95	32.55
TraesCS1D01G213600.1	Wheat	mitochondrion	29.71	30.15
TraesCS3D01G290900.1	Wheat	cytosol	24.15	30.03

Protein Annotations

EnsemblPlants:TraesCS7D01G352500.3	EnsemblPlantsGene:TraesCS7D01G352500	Gene3D:3.90.226.40	GO:GO:0003674	GO:GO:0003824	GO:GO:0003860
GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PANTHER:PTHR43176:SF5	PFAM:PF16113
SEG:seg	SUPFAM:SSF52096	TIGR:cd06558	MapMan:50.3.1	:	:

Description

No Description!

Coordinates

chr7D:-:454075210..454090238

Molecular Weight (calculated)

44770.7 Da

IEP (calculated)

6.276

GRAVY (calculated)

-0.094

Length

414 amino acids

Sequence
(BLAST)

001: MRALLSRIPI SPAAFFSSSS QTLAPLRLGH RFVAMAAAAA EEFVKGRVFP NGVAVITLDR PKALNAMNLE MDLRYKTFLD DWETNPNVKC ILVESSSPRA
101: FSAGMDIKGV AAEIQKDKST SLVQKVFTAE YSLICKIHEY AKPYICLMDG VTMGFGIGLS GHGRYRIITE RTLLAMPENG IGLFPDVGFA YIGAKAPGGG
201: AVGAYLGMTG KRISSPADAL FIGLGTHYVP SGDLGSLKES LLSANFTADP HKDVESLLTG YKKEPESVPQ LEKLLPDIVS SFGPDKSATE SVEELKKRTQ
301: NGDATVSEWA NDALAGLKKG APFSLCLTQK HFSRVASSYG NNENYLSKLA GVMKLEYRIA LRSSVRNDFA EGVRAVLVDK DQNPKWSPAT LEEVNMDEVE
401: SVFEPLAADA ELNV

Best Arabidopsis Sequence Match ( AT4G13360.1 )
(BLAST)

001: MIIIKTLSHR IFFPKFSQTF SSQFHQTLRF SISDRRKFSA MAGAGVDDFV KGNVFPNGVA LITLDRTKAL NAMNLDMDIK YKSFLDEWES DPRVKCVIVE
101: GSTSRAFCAG MDIKGVAAEI QKDKNTPLVQ KVFTAEYTLI CAIAAYKKPY ISLMDGITMG FGLGLSGHGR YRVITERTVL AMPENGIGLF PDVGFSYIAA
201: HSPGGGSVGA YLGLTGKRIS APSDALFVGL GTHYVPSEKL ASLKEAILSA NLSEDPNQDI QATLSKYSSN PESEAHLKSL LPHIESAFSS NKSIKETIEE
301: LKKYQQSTES SVVEWANEAL KGLEKGAPFS LYLTQKYFSN VACAKSKPEN ELATLNGVMK TEYRIALRSA LRGDFAEGVR AVLIDKDQNP KWNPTSIEEV
401: DENEVEALFK PLSPEVEELK V

Arabidopsis Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9T0K7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.