Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010664.1-P | Field mustard | cytosol | 76.39 | 53.66 |
| GSMUA_Achr6P00740_001 | Banana | cytosol | 77.08 | 29.44 |
| KRH60315 | Soybean | nucleus | 81.94 | 28.92 |
| KRH41609 | Soybean | nucleus | 81.94 | 28.92 |
| CDY64934 | Canola | cytosol | 76.39 | 28.87 |
| GSMUA_Achr7P08560_001 | Banana | cytosol | 75.69 | 28.76 |
| AT3G24360.1 | Thale cress | plastid | 77.78 | 26.79 |
| AT4G13360.1 | Thale cress | mitochondrion | 77.78 | 26.6 |
| TraesCS7D01G352500.3 | Wheat | mitochondrion | 76.39 | 26.57 |
| TraesCS7A01G370500.3 | Wheat | mitochondrion, plastid | 77.08 | 26.37 |
| VIT_11s0016g04290.t01 | Wine grape | mitochondrion | 81.94 | 26.16 |
| CDY01126 | Canola | mitochondrion, plastid | 76.39 | 26.07 |
| Bra032700.1-P | Field mustard | plastid | 76.39 | 26.0 |
| Os06t0594100-01 | Rice | mitochondrion | 77.78 | 25.81 |
| KXG20277 | Sorghum | plastid | 76.39 | 25.76 |
| TraesCS7B01G257500.1 | Wheat | mitochondrion, plastid | 75.0 | 25.71 |
| CDX93011 | Canola | plastid | 75.0 | 25.53 |
| CDX94817 | Canola | mitochondrion, plastid | 74.31 | 25.3 |
| Bra001946.1-P | Field mustard | plastid | 74.31 | 25.3 |
| HORVU7Hr1G085310.1 | Barley | peroxisome | 76.39 | 24.5 |
| GSMUA_Achr7P13260_001 | Banana | cytosol | 63.19 | 24.33 |
| Zm00001d046456_P009 | Maize | plastid | 67.36 | 21.7 |
| Solyc05g032690.2.1 | Tomato | cytosol, mitochondrion, nucleus | 10.42 | 16.85 |
| Solyc05g018410.1.1 | Tomato | plastid | 34.72 | 16.67 |
| Solyc01g094090.2.1 | Tomato | cytosol | 33.33 | 14.59 |
| Solyc01g080930.2.1 | Tomato | cytosol | 32.64 | 12.27 |
| Solyc01g108800.2.1 | Tomato | cytoskeleton, cytosol, peroxisome | 30.56 | 11.61 |
| Solyc01g090700.2.1 | Tomato | mitochondrion | 31.25 | 11.14 |
| Solyc12g011160.1.1 | Tomato | cytosol | 27.78 | 10.42 |
| Solyc10g085630.1.1 | Tomato | mitochondrion | 27.78 | 9.76 |
| Solyc06g054520.1.1 | Tomato | cytosol | 26.39 | 9.22 |
| Solyc07g043680.2.1 | Tomato | cytosol | 23.61 | 8.54 |
| Solyc07g044710.1.1 | Tomato | plastid | 22.22 | 8.12 |
| Solyc07g044730.2.1 | Tomato | endoplasmic reticulum, vacuole | 22.22 | 7.49 |
| Solyc07g044720.1.1 | Tomato | plastid | 21.53 | 7.36 |
| Solyc01g108790.1.1 | Tomato | nucleus | 4.17 | 3.41 |
| Solyc07g043690.1.1 | Tomato | cytosol | 1.39 | 1.04 |
| Solyc05g032680.2.1 | Tomato | mitochondrion | 0.69 | 0.88 |
| Solyc07g044740.1.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc07g022880.2.1 | EnsemblPlantsGene:Solyc07g022880.2 | Gene3D:3.90.226.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003860 |
| GO:GO:0016787 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:HIBYL-CoA-H | PANTHER:PTHR43176 | PANTHER:PTHR43176:SF5 | PFAM:PF16113 |
| SUPFAM:SSF52096 | UniParc:UPI000276ABE1 | UniProt:K4CD44 | MapMan:50.3.1 | : | : |
Description
No Description!
Coordinates
chr7:+:23195258..23198091
Molecular Weight (calculated)
16113.6 Da
IEP (calculated)
6.784
GRAVY (calculated)
-0.092
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MASDGDEFVK GHVHRNNVTI LTLDRPKALN AMNLDMDIKY KSFLDEWETD PMVKCALVES SSLRAFSAGM DIKGVVAEIQ KDKFTPLVQK VFAAEYSPIC
101: KISNYRKPYI SFMDGITMGF GIGLSGHGIY RLITERTVLA MPEN
101: KISNYRKPYI SFMDGITMGF GIGLSGHGIY RLITERTVLA MPEN
001: MIKSLSLASA RIFFSRTSPS FLIPFSKLSV SHRRKFSVMA SGSDEFVKGN VYPNGVALIT LDRPKALNAM NLEMDLKYKS LLDEWEYDPG VKCVVVEGST
101: SRAFCAGMDI KGVVAEILMD KNTSLVQKVF TAEYSLICKI AGYRKPYISL MDGITMGFGL GLSGHGRYRV ITERTVLAMP ENGIGLFPDV GFSYIAAHSP
201: GEGSVGAYLG MTGRRISTPS DALFVGLGTH YVPSGKLGSL REAILSADLS KDPQQHIQAT LSNYSSDPET ESHLQMLLPQ IESAFSVSKS VKETIEELKK
301: FQQSSEASVA EWANEAVQGI EKGAPFSLYL THKYFSKVAC AKGKTNNAMA TLNGVMITEY RIALRSALRS DFTEGVRAVL TDKDQNPKWK PASLDEVDET
401: EVDALFMPLS PEFEELNV
101: SRAFCAGMDI KGVVAEILMD KNTSLVQKVF TAEYSLICKI AGYRKPYISL MDGITMGFGL GLSGHGRYRV ITERTVLAMP ENGIGLFPDV GFSYIAAHSP
201: GEGSVGAYLG MTGRRISTPS DALFVGLGTH YVPSGKLGSL REAILSADLS KDPQQHIQAT LSNYSSDPET ESHLQMLLPQ IESAFSVSKS VKETIEELKK
301: FQQSSEASVA EWANEAVQGI EKGAPFSLYL THKYFSKVAC AKGKTNNAMA TLNGVMITEY RIALRSALRS DFTEGVRAVL TDKDQNPKWK PASLDEVDET
401: EVDALFMPLS PEFEELNV
Arabidopsis Description
3-hydroxyisobutyryl-CoA hydrolase-like protein 4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LK08]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.