Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G325800.1 | Wheat | cytosol | 96.62 | 96.62 |
| TraesCS3D01G290900.1 | Wheat | cytosol | 83.38 | 96.4 |
| HORVU3Hr1G072100.2 | Barley | cytosol | 94.81 | 93.59 |
| EES03617 | Sorghum | cytosol | 85.97 | 86.42 |
| Os01t0752200-01 | Rice | plasma membrane | 86.75 | 85.86 |
| Zm00001d043490_P001 | Maize | cytosol, extracellular | 85.19 | 85.42 |
| Solyc12g011160.1.1 | Tomato | cytosol | 67.79 | 67.97 |
| PGSC0003DMT400020300 | Potato | cytosol | 66.49 | 66.67 |
| Bra030657.1-P | Field mustard | cytosol | 64.94 | 66.49 |
| CDX86518 | Canola | cytosol | 65.19 | 65.54 |
| CDY15584 | Canola | cytosol | 64.16 | 65.17 |
| VIT_12s0028g00590.t01 | Wine grape | cytosol | 64.94 | 64.27 |
| AT1G06550.1 | Thale cress | cytosol | 64.16 | 63.82 |
| KRH46020 | Soybean | vacuole | 64.16 | 62.06 |
| CDY49269 | Canola | extracellular, mitochondrion, nucleus, plastid | 36.1 | 61.78 |
| KRG98957 | Soybean | nucleus | 64.16 | 61.6 |
| GSMUA_Achr9P06670_001 | Banana | plastid | 70.13 | 57.2 |
| Solyc07g043690.1.1 | Tomato | cytosol | 28.57 | 56.99 |
| PGSC0003DMT400054311 | Potato | cytosol | 23.38 | 56.6 |
| Bra030656.1-P | Field mustard | cytosol | 52.99 | 56.51 |
| PGSC0003DMT400079108 | Potato | cytosol | 50.39 | 56.4 |
| PGSC0003DMT400041136 | Potato | cytosol | 50.39 | 55.91 |
| CDY15583 | Canola | cytosol | 53.51 | 55.83 |
| PGSC0003DMT400069137 | Potato | cytosol, mitochondrion | 40.78 | 55.48 |
| Solyc06g054520.1.1 | Tomato | cytosol | 59.22 | 55.34 |
| CDY15581 | Canola | cytosol | 39.22 | 55.31 |
| Solyc07g043680.2.1 | Tomato | cytosol | 56.62 | 54.77 |
| PGSC0003DMT400057075 | Potato | cytosol, plastid | 55.84 | 53.75 |
| Solyc07g044710.1.1 | Tomato | plastid | 54.29 | 53.05 |
| CDX86519 | Canola | extracellular | 25.97 | 50.51 |
| Solyc07g044720.1.1 | Tomato | plastid | 54.81 | 50.12 |
| Solyc07g044730.2.1 | Tomato | endoplasmic reticulum, vacuole | 54.29 | 48.95 |
| PGSC0003DMT400065713 | Potato | cytosol, mitochondrion | 28.31 | 45.42 |
| Solyc07g044740.1.1 | Tomato | cytosol | 14.55 | 43.08 |
| Bra030655.1-P | Field mustard | extracellular | 17.4 | 37.43 |
| TraesCS1A01G210300.2 | Wheat | mitochondrion | 38.44 | 36.27 |
| TraesCS1A01G190800.1 | Wheat | plastid | 36.62 | 35.97 |
| TraesCS7A01G370500.3 | Wheat | mitochondrion, plastid | 30.13 | 27.55 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G291100.1 | EnsemblPlantsGene:TraesCS3A01G291100 | Gene3D:3.90.226.40 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003860 |
| GO:GO:0008150 | GO:GO:0009628 | GO:GO:0016787 | GO:GO:0080167 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:HIBYL-CoA-H |
| PANTHER:PTHR43176 | PANTHER:PTHR43176:SF2 | PFAM:PF16113 | SEG:seg | SUPFAM:SSF52096 | TIGR:cd06558 |
| MapMan:50.3.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:521304757..521308475
Molecular Weight (calculated)
42817.0 Da
IEP (calculated)
5.700
GRAVY (calculated)
-0.270
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQEQSNPNE VVLGQEINGA RVVTLNRPRQ LNGINDRVVY LLAQLLEKWE KDANAKLVIF KGAGRAFSAG GDLKMFYEGR SSDDSCLEVV YRMYWLCYHI
101: HTYKKTTVAL VNGLVMGGGA AMVAPLKFAV VTEKTVFATP EASVGLHTDC SFSYIHSRLP GYLGEYLALT GARLNAKEMI TAGLATHFVH SEKLEDLEKQ
201: LLNLNTGDES AVRAVIEEFS TDVQLDQESI LNKLPTIDKC FSAETVEEIL KALDSEVSVD GNQWIAPVLK SMRRSSPTGL KITLRSVREG RKQSLQECLK
301: KEFGLTMNIL RSIITGDVYE GIRALSIDKD NAPKWSPATV EEVKNEDIDR VFEPFSSGHE LQVPSDDSNR WSGKYEHTVY AKSSQ
101: HTYKKTTVAL VNGLVMGGGA AMVAPLKFAV VTEKTVFATP EASVGLHTDC SFSYIHSRLP GYLGEYLALT GARLNAKEMI TAGLATHFVH SEKLEDLEKQ
201: LLNLNTGDES AVRAVIEEFS TDVQLDQESI LNKLPTIDKC FSAETVEEIL KALDSEVSVD GNQWIAPVLK SMRRSSPTGL KITLRSVREG RKQSLQECLK
301: KEFGLTMNIL RSIITGDVYE GIRALSIDKD NAPKWSPATV EEVKNEDIDR VFEPFSSGHE LQVPSDDSNR WSGKYEHTVY AKSSQ
001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
Arabidopsis Description
3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.