Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
16595579
plastid: 18419817 |
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G434200.2 | Wheat | nucleus | 89.57 | 90.03 |
| TraesCS1A01G425200.2 | Wheat | nucleus | 86.9 | 86.79 |
| HORVU1Hr1G092980.14 | Barley | plastid | 84.86 | 76.05 |
| Os05t0586400-01 | Rice | nucleus | 57.25 | 57.69 |
| KXG22639 | Sorghum | nucleus | 55.98 | 55.56 |
| Zm00001d009716_P001 | Maize | nucleus | 49.75 | 51.18 |
| TraesCS3B01G253700.2 | Wheat | nucleus | 45.93 | 45.35 |
| Bra037384.1-P | Field mustard | nucleus | 12.09 | 41.48 |
| CDX79176 | Canola | cytosol | 5.34 | 37.17 |
| CDY15177 | Canola | nucleus | 20.23 | 28.55 |
| CDX90032 | Canola | nucleus | 19.97 | 28.04 |
| CDY48504 | Canola | nucleus | 19.97 | 27.89 |
| CDX91876 | Canola | nucleus | 20.23 | 27.23 |
| CDY67475 | Canola | nucleus | 19.97 | 26.57 |
| Bra033264.1-P | Field mustard | nucleus | 19.59 | 26.51 |
| Bra000943.1-P | Field mustard | nucleus | 19.97 | 26.17 |
| CDY07174 | Canola | nucleus | 20.61 | 25.47 |
| CDY42041 | Canola | cytosol | 20.87 | 25.39 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 24.94 | 25.1 |
| CDX80013 | Canola | nucleus | 20.99 | 24.81 |
| Bra004541.1-P | Field mustard | nucleus | 20.87 | 24.44 |
| GSMUA_Achr3P25070_001 | Banana | vacuole | 20.99 | 23.84 |
| CDX71720 | Canola | cytosol | 22.26 | 23.65 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 25.45 | 23.56 |
| Bra007625.1-P | Field mustard | cytosol | 22.14 | 23.48 |
| CDY11374 | Canola | cytosol | 21.76 | 23.08 |
| AT1G01440.1 | Thale cress | nucleus | 19.34 | 22.89 |
| AT4G01090.1 | Thale cress | nucleus | 20.74 | 22.83 |
| AT3G61670.1 | Thale cress | nucleus | 22.65 | 22.53 |
| CDY11373 | Canola | cytosol | 20.74 | 22.24 |
| TraesCS7B01G276600.1 | Wheat | nucleus | 23.28 | 22.1 |
| AT2G46380.1 | Thale cress | nucleus | 21.5 | 22.01 |
| TraesCS7B01G247600.1 | Wheat | cytosol | 23.16 | 21.64 |
| KRG97141 | Soybean | nucleus | 24.3 | 20.97 |
| KRH68892 | Soybean | nucleus | 24.05 | 20.91 |
| KRH06502 | Soybean | nucleus | 23.03 | 20.29 |
| KRH47938 | Soybean | nucleus | 22.77 | 20.02 |
| Solyc01g095590.2.1 | Tomato | nucleus | 22.52 | 18.3 |
| Solyc08g082040.2.1 | Tomato | nucleus | 21.76 | 18.1 |
| PGSC0003DMT400032053 | Potato | nucleus | 21.5 | 17.86 |
| PGSC0003DMT400000290 | Potato | nucleus | 22.39 | 17.53 |
| KRG99688 | Soybean | cytosol | 0.76 | 8.82 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G459600.2 | EnsemblPlantsGene:TraesCS1B01G459600 | InterPro:Zinc_ribbon_12 | PANTHER:PTHR31105 | PANTHER:PTHR31105:SF8 | PFAM:PF11331 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:673741709..673745517
Molecular Weight (calculated)
86191.7 Da
IEP (calculated)
8.836
GRAVY (calculated)
-0.904
Length
786 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSETKEMKY RRRARAPEPG DYGQCGGGGG AVDWAALKQQ DPAELLRKLD EIRDQITRSC EAAGPRGADP PHRMGRGAVS MRHAHADPLP PPPGRGALPE
101: YYRSSRHAGR YGQGGPPSSY DQRSVCDDRY ARQPSGRFRQ PRPEGQWDGY GYGGQGSGHH SSCQCAQCVH GQRAMPPQEE SIPMARFFAG QQRPPYQFDR
201: SASSISSEYD RRSVASSLYS HLSMSKRRVE YFSKRADSFC RPAKGGAPFV VCSSCNQLLQ LPPGKCTSPK QNRVQCGSCS EVVTFKLKGV KVHPAIPSSS
301: FSVPNSVRSS DRRAPQSSGW YPYEDDDTSS FGSYRQKQNF SDNLSQSSIG SYGSSTSKER GPNKISQVKP VSVSKSRFAD SPKDILCQGD ADSQAEASVI
401: RTISPQAPVL EDKLVDPFSS QQNDCSGGDQ IKSKRYGLNS KGNFDVRGER IDVKCEQKSN ESRKDGFSGE TAKKAYGQKY LKQLNASCPD GHIGNKNTRK
501: ANSDDSRSSS LEDEATSKRY EEKSKQDDNS FEVQSVNKRY DNCNKEGYNN DFGFDSITKT CEEESIEDDY AKSLSSNCEN AKGVAKNESS VSERTNTSSH
601: VSSDAGLDEI QSSAGKSGDS SFFGGFLKKG FKDLSLFNQS MDSVKVSING HPISERALRK AEKKAGPVSP GSYWYDQRAG FWGVMGHECS GIIPPFIKEF
701: SYSMPKNCAG GNTGVLVNGR ELHQKDFDLL VKRGLQRFSE KSYTVDISGN VIDAATGDKL RSLGKLAPTI EKMKRGFGMH VPEEIS
101: YYRSSRHAGR YGQGGPPSSY DQRSVCDDRY ARQPSGRFRQ PRPEGQWDGY GYGGQGSGHH SSCQCAQCVH GQRAMPPQEE SIPMARFFAG QQRPPYQFDR
201: SASSISSEYD RRSVASSLYS HLSMSKRRVE YFSKRADSFC RPAKGGAPFV VCSSCNQLLQ LPPGKCTSPK QNRVQCGSCS EVVTFKLKGV KVHPAIPSSS
301: FSVPNSVRSS DRRAPQSSGW YPYEDDDTSS FGSYRQKQNF SDNLSQSSIG SYGSSTSKER GPNKISQVKP VSVSKSRFAD SPKDILCQGD ADSQAEASVI
401: RTISPQAPVL EDKLVDPFSS QQNDCSGGDQ IKSKRYGLNS KGNFDVRGER IDVKCEQKSN ESRKDGFSGE TAKKAYGQKY LKQLNASCPD GHIGNKNTRK
501: ANSDDSRSSS LEDEATSKRY EEKSKQDDNS FEVQSVNKRY DNCNKEGYNN DFGFDSITKT CEEESIEDDY AKSLSSNCEN AKGVAKNESS VSERTNTSSH
601: VSSDAGLDEI QSSAGKSGDS SFFGGFLKKG FKDLSLFNQS MDSVKVSING HPISERALRK AEKKAGPVSP GSYWYDQRAG FWGVMGHECS GIIPPFIKEF
701: SYSMPKNCAG GNTGVLVNGR ELHQKDFDLL VKRGLQRFSE KSYTVDISGN VIDAATGDKL RSLGKLAPTI EKMKRGFGMH VPEEIS
001: MAESSTIEAR LVRCPKCKNL LQEPKDCPFF QCGGCGTVLC AKNKDREADL LSVKSVENRS KEIEVTSGSS EEESDSNASL RHQQDGQTET WDVHNDPSSK
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q0WVG1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.