Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d009716_P001 | Maize | nucleus | 74.62 | 77.36 |
| Os05t0586400-01 | Rice | nucleus | 56.31 | 57.18 |
| TraesCS1B01G459600.2 | Wheat | plastid | 55.56 | 55.98 |
| TraesCS1D01G434200.2 | Wheat | nucleus | 55.18 | 55.88 |
| TraesCS1A01G425200.2 | Wheat | nucleus | 54.55 | 54.89 |
| HORVU1Hr1G092980.14 | Barley | plastid | 55.81 | 50.4 |
| EES03295 | Sorghum | nucleus | 43.31 | 42.98 |
| Bra037384.1-P | Field mustard | nucleus | 11.99 | 41.48 |
| CDX79176 | Canola | cytosol | 5.05 | 35.4 |
| CDY48504 | Canola | nucleus | 19.57 | 27.53 |
| CDX90032 | Canola | nucleus | 19.44 | 27.5 |
| CDY15177 | Canola | nucleus | 19.07 | 27.11 |
| Bra033264.1-P | Field mustard | nucleus | 19.82 | 27.02 |
| CDX91876 | Canola | nucleus | 18.81 | 25.51 |
| CDY67475 | Canola | nucleus | 18.56 | 24.87 |
| CDY07174 | Canola | nucleus | 19.95 | 24.84 |
| CDY42041 | Canola | cytosol | 20.2 | 24.77 |
| Bra000943.1-P | Field mustard | nucleus | 18.56 | 24.5 |
| Bra004541.1-P | Field mustard | nucleus | 20.71 | 24.44 |
| GSMUA_Achr3P25070_001 | Banana | vacuole | 21.21 | 24.28 |
| CDX80013 | Canola | nucleus | 20.33 | 24.21 |
| CDX71720 | Canola | cytosol | 22.22 | 23.78 |
| CDY11374 | Canola | cytosol | 21.97 | 23.48 |
| Bra007625.1-P | Field mustard | cytosol | 21.84 | 23.35 |
| EER88427 | Sorghum | nucleus | 22.73 | 22.61 |
| AT1G01440.1 | Thale cress | nucleus | 18.94 | 22.59 |
| CDY11373 | Canola | cytosol | 20.83 | 22.51 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 22.1 | 22.41 |
| AT3G61670.1 | Thale cress | nucleus | 22.22 | 22.28 |
| AT2G46380.1 | Thale cress | nucleus | 21.59 | 22.27 |
| KXG29961 | Sorghum | nucleus | 24.24 | 22.22 |
| AT4G01090.1 | Thale cress | nucleus | 19.57 | 21.71 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 23.23 | 21.67 |
| KRG97141 | Soybean | nucleus | 23.61 | 20.53 |
| KRH68892 | Soybean | nucleus | 23.36 | 20.46 |
| Solyc08g082040.2.1 | Tomato | nucleus | 23.74 | 19.89 |
| PGSC0003DMT400032053 | Potato | nucleus | 23.61 | 19.77 |
| KRH06502 | Soybean | nucleus | 21.72 | 19.28 |
| KRH47938 | Soybean | nucleus | 21.21 | 18.79 |
| Solyc01g095590.2.1 | Tomato | nucleus | 21.72 | 17.79 |
| PGSC0003DMT400000290 | Potato | nucleus | 21.46 | 16.93 |
| KRG99688 | Soybean | cytosol | 0.63 | 7.35 |
Protein Annotations
| EnsemblPlants:KXG22639 | EnsemblPlantsGene:SORBI_3009G250100 | InterPro:Zinc_ribbon_12 | PANTHER:PTHR31105 | PANTHER:PTHR31105:SF8 | PFAM:PF11331 |
| ProteinID:KXG22639 | ProteinID:KXG22639.1 | SEG:seg | UniParc:UPI00081AC6EA | UniProt:A0A1B6PA43 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr9:+:58539048..58543991
Molecular Weight (calculated)
88548.5 Da
IEP (calculated)
9.581
GRAVY (calculated)
-0.935
Length
792 amino acids
Sequence
(BLAST)
(BLAST)
001: MASEAKEMKY RRRSRVPELP PSEYGQCSDR SGALDWAALK QDPAELLRKL DEIRDQITRS CELMGQPPER HRAMSRRTVS LRPSYAEQQQ PPPPPHAADR
101: GPPDHYRSRY AGRYRTGLAP SSYDQLQRSV SDETYARQPS GRFRQQYHEE QRESYGFGQG RRHHSACQCA QCLQSQRAAA PEEHILMARY FAGQQGQGSF
201: RFDRSQPISS ELDRRSVASS LYSHVSMSKR RVEYFRKKAE KFCRPMRGAA PFVVCTSCSH LLQLPQGKFT GRKKNQVQCG SCSEIITFKP KEVKVHPVIL
301: PSSFPVSKSV RTRGSNHRDA KSSGWYQHQD DDNFNFYKLQ AHDIHRQKID FADSMSPSST ASYDRTDSEH GSNRSIQLKS VPASRSRFSN DPKDILCQGD
401: TGSQVETSGH CTVSPQGPIL VDKQIDPFSS QRKGYSGGTQ IKREEYDINT KSDYEANARD ESLGKKCIQK SKEGHKGGLG DELSNGRAHE QKARHGNIGS
501: LEEGIVGNKY KHKTNNVVSS SPEDEDMSIK YERNGSFRVE ELTKRDDKCN QKDGSNILEV ESIARGCEQD SMKDDSGKLL HSGSRNGNRA AKNDSSVKEH
601: TNSSSRVSSV AEVDEIQSSV GKNGDSSFFT GFLKKGLKDL SLFNQSVDSA KVSINGHPIS ERALRKAEKK AGPVGPGSYW YDYRAGFWGV FGQECRGIIP
701: PFIKEFNYPI PKNCAGGNTG VFVNGRELHQ KDFDLLVGRG LPRIPGKSYS VEISGNVIDD TTGTKLRGLG KLAPTIEKMK RGFGMHIPEE TK
101: GPPDHYRSRY AGRYRTGLAP SSYDQLQRSV SDETYARQPS GRFRQQYHEE QRESYGFGQG RRHHSACQCA QCLQSQRAAA PEEHILMARY FAGQQGQGSF
201: RFDRSQPISS ELDRRSVASS LYSHVSMSKR RVEYFRKKAE KFCRPMRGAA PFVVCTSCSH LLQLPQGKFT GRKKNQVQCG SCSEIITFKP KEVKVHPVIL
301: PSSFPVSKSV RTRGSNHRDA KSSGWYQHQD DDNFNFYKLQ AHDIHRQKID FADSMSPSST ASYDRTDSEH GSNRSIQLKS VPASRSRFSN DPKDILCQGD
401: TGSQVETSGH CTVSPQGPIL VDKQIDPFSS QRKGYSGGTQ IKREEYDINT KSDYEANARD ESLGKKCIQK SKEGHKGGLG DELSNGRAHE QKARHGNIGS
501: LEEGIVGNKY KHKTNNVVSS SPEDEDMSIK YERNGSFRVE ELTKRDDKCN QKDGSNILEV ESIARGCEQD SMKDDSGKLL HSGSRNGNRA AKNDSSVKEH
601: TNSSSRVSSV AEVDEIQSSV GKNGDSSFFT GFLKKGLKDL SLFNQSVDSA KVSINGHPIS ERALRKAEKK AGPVGPGSYW YDYRAGFWGV FGQECRGIIP
701: PFIKEFNYPI PKNCAGGNTG VFVNGRELHQ KDFDLLVGRG LPRIPGKSYS VEISGNVIDD TTGTKLRGLG KLAPTIEKMK RGFGMHIPEE TK
001: MAESSTIEAR LVRCPKCKNL LQEPKDCPFF QCGGCGTVLC AKNKDREADL LSVKSVENRS KEIEVTSGSS EEESDSNASL RHQQDGQTET WDVHNDPSSK
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q0WVG1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.