Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016081_P002 | Maize | nucleus | 87.5 | 88.73 |
| Zm00001d053382_P002 | Maize | nucleus | 79.28 | 83.03 |
| Os02t0258300-01 | Rice | nucleus | 69.79 | 71.62 |
| TraesCS7D01G343700.1 | Wheat | cytosol | 65.39 | 66.55 |
| TraesCS7A01G336000.1 | Wheat | nucleus | 65.62 | 66.47 |
| TraesCS7B01G247600.1 | Wheat | cytosol | 64.35 | 66.11 |
| HORVU7Hr1G082720.10 | Barley | cytosol, nucleus | 61.92 | 62.65 |
| EER88427 | Sorghum | nucleus | 50.81 | 55.15 |
| Bra037384.1-P | Field mustard | nucleus | 12.15 | 45.85 |
| KRG99688 | Soybean | cytosol | 3.59 | 45.59 |
| GSMUA_Achr7P14150_001 | Banana | nucleus | 38.77 | 44.2 |
| GSMUA_Achr10P... | Banana | nucleus | 39.7 | 43.75 |
| GSMUA_Achr10P... | Banana | cytosol | 37.73 | 42.01 |
| CDX79176 | Canola | cytosol | 5.44 | 41.59 |
| GSMUA_Achr10P... | Banana | nucleus | 33.91 | 39.01 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 33.33 | 33.92 |
| CDY42041 | Canola | cytosol | 24.31 | 32.51 |
| CDX71720 | Canola | cytosol | 26.97 | 31.49 |
| CDY11374 | Canola | cytosol | 26.97 | 31.44 |
| Bra007625.1-P | Field mustard | cytosol | 26.85 | 31.31 |
| CDX80013 | Canola | nucleus | 23.96 | 31.13 |
| Bra004541.1-P | Field mustard | nucleus | 23.73 | 30.55 |
| KRH68892 | Soybean | nucleus | 31.6 | 30.2 |
| CDY15177 | Canola | nucleus | 19.44 | 30.16 |
| CDY11373 | Canola | cytosol | 25.46 | 30.01 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 27.08 | 29.96 |
| AT3G61670.1 | Thale cress | nucleus | 27.31 | 29.87 |
| KRG97141 | Soybean | nucleus | 31.48 | 29.86 |
| AT2G46380.1 | Thale cress | nucleus | 26.5 | 29.82 |
| CDY48504 | Canola | nucleus | 19.33 | 29.66 |
| Bra033264.1-P | Field mustard | nucleus | 19.56 | 29.09 |
| CDX91876 | Canola | nucleus | 19.44 | 28.77 |
| KRH06502 | Soybean | nucleus | 29.51 | 28.59 |
| CDX90032 | Canola | nucleus | 18.4 | 28.39 |
| KRH47938 | Soybean | nucleus | 28.47 | 27.52 |
| CDY67475 | Canola | nucleus | 18.63 | 27.24 |
| CDY07174 | Canola | nucleus | 20.02 | 27.2 |
| Bra000943.1-P | Field mustard | nucleus | 18.63 | 26.83 |
| AT1G01440.1 | Thale cress | nucleus | 20.02 | 26.05 |
| Solyc08g082040.2.1 | Tomato | nucleus | 28.24 | 25.82 |
| PGSC0003DMT400000290 | Potato | nucleus | 29.98 | 25.8 |
| Solyc01g095590.2.1 | Tomato | nucleus | 28.7 | 25.65 |
| PGSC0003DMT400032053 | Potato | nucleus | 27.89 | 25.48 |
| EES03295 | Sorghum | nucleus | 22.57 | 24.44 |
| KXG22639 | Sorghum | nucleus | 22.22 | 24.24 |
| AT4G01090.1 | Thale cress | nucleus | 20.02 | 24.23 |
Protein Annotations
| EnsemblPlants:KXG29961 | EnsemblPlantsGene:SORBI_3004G115700 | InterPro:Zinc_ribbon_12 | ncoils:Coil | PANTHER:PTHR31105 | PANTHER:PTHR31105:SF7 |
| PFAM:PF11331 | ProteinID:KXG29961 | ProteinID:KXG29961.1 | SEG:seg | UniParc:UPI0001C80CB7 | UniProt:A0A194YP43 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:12022815..12028099
Molecular Weight (calculated)
94909.0 Da
IEP (calculated)
7.271
GRAVY (calculated)
-0.719
Length
864 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGEEDGSGS GSGSAAQRPP PPPPRPPQQQ QIRVVRCPKC DKLLPELPNY SVYVCGGCGA TLQAKKNSGS DASSDTEHVK YLEVLESLPD KKGAASEASC
101: AVREADTNTI EARSEERFVP NRMVAAAHSQ SGFSFDDNQT TCAPSCTMKL EPAIRDDNRE VREAKYRRIR YEEKGEAKQP VRVRDRSPRP VVNSIPSNAY
201: SVEGPSECQM KPGFIFANGE KGHLSDRNSD SPSTRVSGLE KDRTELLRML DELRDQVQRS CEIADKSSVN ASANRMVDPA SSYNPHERLS RLRYGSPQLQ
301: RNGSQHSPSL NGQAPVVPPA YPSVPVQQDL HGYGESVAHM GAPSYPAAPY PWRNFDNYFH GQYDPDPLIS YHHDGFYHQP ACSCLHCYHR EFLPVHGAPL
401: GFNHRRAPYL MNNPSLYPVE GPVVFGAQNY NSRGMNGMMR RNHMRATLSK KPAQTCEPIV NGAPFTICYN CYEVLQLPKN SLLLGKDEYK LRCGSCSHAI
501: VVRLDGSRLD VSAPTPVSHL SPGSKNFSNN GQGSNGQNAD GRLLPSYSFS VGSHCSQEKD LPSNSSEADK MQCISSSASI SDDDNSPDRS NSQKNSCGSR
601: DLPPDAEVVI RVPSLPLRDH FGYSPSERVV DGSGKGSRST RSEHEKGVLT ESFKPNKVKD VPVASVLDPS DDEYDDPEYG QDPGDGAQYV DHPRATKSGD
701: SFFSSLIKKS FKINGGMGNG RAKVFINGYP ISDRAVRKAE KIAGPIYPGE YWYDYRAGFW GVMGQPCLGM IPPYIAEFNY PMPKNCAGGN TGVFINGREL
801: HQKDLDLLVG RGLPDSPDRS YRVEISGKVS DEVSGEELYC LGKLAPTVEK MKRGFGMRVP RIIQ
101: AVREADTNTI EARSEERFVP NRMVAAAHSQ SGFSFDDNQT TCAPSCTMKL EPAIRDDNRE VREAKYRRIR YEEKGEAKQP VRVRDRSPRP VVNSIPSNAY
201: SVEGPSECQM KPGFIFANGE KGHLSDRNSD SPSTRVSGLE KDRTELLRML DELRDQVQRS CEIADKSSVN ASANRMVDPA SSYNPHERLS RLRYGSPQLQ
301: RNGSQHSPSL NGQAPVVPPA YPSVPVQQDL HGYGESVAHM GAPSYPAAPY PWRNFDNYFH GQYDPDPLIS YHHDGFYHQP ACSCLHCYHR EFLPVHGAPL
401: GFNHRRAPYL MNNPSLYPVE GPVVFGAQNY NSRGMNGMMR RNHMRATLSK KPAQTCEPIV NGAPFTICYN CYEVLQLPKN SLLLGKDEYK LRCGSCSHAI
501: VVRLDGSRLD VSAPTPVSHL SPGSKNFSNN GQGSNGQNAD GRLLPSYSFS VGSHCSQEKD LPSNSSEADK MQCISSSASI SDDDNSPDRS NSQKNSCGSR
601: DLPPDAEVVI RVPSLPLRDH FGYSPSERVV DGSGKGSRST RSEHEKGVLT ESFKPNKVKD VPVASVLDPS DDEYDDPEYG QDPGDGAQYV DHPRATKSGD
701: SFFSSLIKKS FKINGGMGNG RAKVFINGYP ISDRAVRKAE KIAGPIYPGE YWYDYRAGFW GVMGQPCLGM IPPYIAEFNY PMPKNCAGGN TGVFINGREL
801: HQKDLDLLVG RGLPDSPDRS YRVEISGKVS DEVSGEELYC LGKLAPTVEK MKRGFGMRVP RIIQ
001: MADSTKVRLV RCPKCENLLS EPEDSPFFQC GGCFTVLRAK TKEREADSVS VKSVEDTAKP VSASSPEKAI LDSSETSSDS DVPSLRHHHN VVPVDVESDP
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRLPKRTT
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRLPKRTT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q9M371]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.