Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d046072_P001 | Maize | cytosol | 81.78 | 80.67 |
| Os06t0524300-01 | Rice | nucleus | 64.2 | 63.01 |
| HORVU0Hr1G021800.1 | Barley | nucleus | 61.06 | 59.63 |
| TraesCS7A01G351500.1 | Wheat | nucleus | 61.43 | 59.42 |
| TraesCS7B01G276600.1 | Wheat | nucleus | 61.68 | 59.3 |
| TraesCS7D01G371500.1 | Wheat | nucleus | 60.93 | 58.65 |
| KXG29961 | Sorghum | nucleus | 55.15 | 50.81 |
| Bra037384.1-P | Field mustard | nucleus | 12.94 | 44.98 |
| KRG99688 | Soybean | cytosol | 3.64 | 42.65 |
| CDX79176 | Canola | cytosol | 5.53 | 38.94 |
| GSMUA_Achr7P14150_001 | Banana | nucleus | 34.92 | 36.68 |
| GSMUA_Achr10P... | Banana | nucleus | 35.3 | 35.84 |
| GSMUA_Achr10P... | Banana | nucleus | 33.79 | 35.82 |
| GSMUA_Achr10P... | Banana | cytosol | 34.05 | 34.92 |
| CDY42041 | Canola | cytosol | 24.75 | 30.5 |
| CDX71720 | Canola | cytosol | 27.89 | 30.0 |
| CDY11374 | Canola | cytosol | 27.89 | 29.96 |
| Bra007625.1-P | Field mustard | cytosol | 27.76 | 29.82 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 31.78 | 29.8 |
| CDX80013 | Canola | nucleus | 24.87 | 29.77 |
| Bra004541.1-P | Field mustard | nucleus | 24.75 | 29.36 |
| CDY11373 | Canola | cytosol | 25.75 | 27.97 |
| KRH06502 | Soybean | nucleus | 30.65 | 27.35 |
| KRG97141 | Soybean | nucleus | 31.03 | 27.11 |
| CDY15177 | Canola | nucleus | 18.97 | 27.11 |
| KRH68892 | Soybean | nucleus | 30.78 | 27.1 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 26.51 | 27.02 |
| AT3G61670.1 | Thale cress | nucleus | 26.76 | 26.96 |
| AT2G46380.1 | Thale cress | nucleus | 26.0 | 26.95 |
| CDY48504 | Canola | nucleus | 18.97 | 26.82 |
| Bra033264.1-P | Field mustard | nucleus | 19.47 | 26.68 |
| CDX90032 | Canola | nucleus | 18.47 | 26.25 |
| KRH47938 | Soybean | nucleus | 29.4 | 26.17 |
| CDX91876 | Canola | nucleus | 19.1 | 26.03 |
| CDY67475 | Canola | nucleus | 18.84 | 25.38 |
| PGSC0003DMT400032053 | Potato | nucleus | 29.52 | 24.84 |
| Solyc01g095590.2.1 | Tomato | nucleus | 30.15 | 24.82 |
| PGSC0003DMT400000290 | Potato | nucleus | 31.03 | 24.6 |
| CDY07174 | Canola | nucleus | 19.6 | 24.53 |
| Solyc08g082040.2.1 | Tomato | nucleus | 29.02 | 24.44 |
| Bra000943.1-P | Field mustard | nucleus | 18.34 | 24.33 |
| AT1G01440.1 | Thale cress | nucleus | 19.6 | 23.49 |
| KXG22639 | Sorghum | nucleus | 22.61 | 22.73 |
| EES03295 | Sorghum | nucleus | 22.74 | 22.68 |
| AT4G01090.1 | Thale cress | nucleus | 20.1 | 22.41 |
Protein Annotations
| EnsemblPlants:EER88427 | EnsemblPlantsGene:SORBI_3010G151700 | EntrezGene:8072625 | InterPro:Zinc_ribbon_12 | ncoils:Coil | PANTHER:PTHR31105 |
| PANTHER:PTHR31105:SF7 | PFAM:PF11331 | ProteinID:EER88427 | ProteinID:EER88427.1 | RefSeq:XP_002437060.1 | SEG:seg |
| unigene:Sbi.11497 | UniParc:UPI0001A8911C | UniProt:C5Z3L0 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr10:+:44032883..44039100
Molecular Weight (calculated)
87795.4 Da
IEP (calculated)
7.562
GRAVY (calculated)
-0.722
Length
796 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGEAAAAAA EAVARIRLVR CPKCDKFLPE LPAYSVYVCG GCGATLQAKK KNSAQSSHDA DNGNVKYLEV LERVPEASAR KHGASTTDRS ETSKMADVHI
101: KQVYYGHHDS IQTGPSPSNL NASIRDDGKE AKYRHIRYWE NGEMGQSLRV RDMSPKSPAN AYQGECHSKL RYNYSAKECP GERNLDGPSR VRGLEKDRTE
201: ILRMLDELRD QVQQSCDATN GPSGSAPTTT AADSHISYGT SDRLNQLRHI PPQLHRNDSH HTPSLNVQSP SVSRVYAPLP AQQDCVGYAE LISHARRSSY
301: PASLYPWRNF DNYFFGQHDP DSLLSCRHDG FYHQAACSCL HCCHQEFLPV QGNHMGFNDQ RAPYLLNGYG AYPVDSPLLG QQRYSRRAIN TTLQQNHMRV
401: NVSKKPAQTC EPVAGGAPFT ICCNCYEVLQ IPRKQSLSGN EYKLRCGSCS HAILVKLDGN RLNVSEIALG THLSDGQEND MGTDGQTPDN RSIPAYRFSV
501: GSPASQEKDL HSNLSESENN HTPLATDSEG TSQSRDLPPE DSAVSHVPNL PHRSHSGSSP SEHSGVGSRS THSEPEKVIP LTETSKQNSV KGICVSNKMQ
601: SPNNEFDVTE YTDDTLNAQQ DTEHPKATKD NNSFLTNLIK KSFKINNGMR NGRARIYVNG FPISDRAVRK AEKLAGSICP GNYWYDYHAG FWGVMGRPCL
701: GMIPPYIPEF NFPMPKNCAG GNTGVFVNGR ELHQKDLDLL VTRGLSDSPG RSYVVENSGK VSDEVSGEEL YGLGKLAPTV EKMGRGFGMR VPRFIQ
101: KQVYYGHHDS IQTGPSPSNL NASIRDDGKE AKYRHIRYWE NGEMGQSLRV RDMSPKSPAN AYQGECHSKL RYNYSAKECP GERNLDGPSR VRGLEKDRTE
201: ILRMLDELRD QVQQSCDATN GPSGSAPTTT AADSHISYGT SDRLNQLRHI PPQLHRNDSH HTPSLNVQSP SVSRVYAPLP AQQDCVGYAE LISHARRSSY
301: PASLYPWRNF DNYFFGQHDP DSLLSCRHDG FYHQAACSCL HCCHQEFLPV QGNHMGFNDQ RAPYLLNGYG AYPVDSPLLG QQRYSRRAIN TTLQQNHMRV
401: NVSKKPAQTC EPVAGGAPFT ICCNCYEVLQ IPRKQSLSGN EYKLRCGSCS HAILVKLDGN RLNVSEIALG THLSDGQEND MGTDGQTPDN RSIPAYRFSV
501: GSPASQEKDL HSNLSESENN HTPLATDSEG TSQSRDLPPE DSAVSHVPNL PHRSHSGSSP SEHSGVGSRS THSEPEKVIP LTETSKQNSV KGICVSNKMQ
601: SPNNEFDVTE YTDDTLNAQQ DTEHPKATKD NNSFLTNLIK KSFKINNGMR NGRARIYVNG FPISDRAVRK AEKLAGSICP GNYWYDYHAG FWGVMGRPCL
701: GMIPPYIPEF NFPMPKNCAG GNTGVFVNGR ELHQKDLDLL VTRGLSDSPG RSYVVENSGK VSDEVSGEEL YGLGKLAPTV EKMGRGFGMR VPRFIQ
001: MADSTKVRLV RCPKCENLLS EPEDSPFFQC GGCFTVLRAK TKEREADSVS VKSVEDTAKP VSASSPEKAI LDSSETSSDS DVPSLRHHHN VVPVDVESDP
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRLPKRTT
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRLPKRTT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q9M371]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.