Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G276600.1 | Wheat | nucleus | 89.94 | 88.53 |
| TraesCS7D01G371500.1 | Wheat | nucleus | 88.22 | 86.94 |
| TraesCS7A01G351500.1 | Wheat | nucleus | 80.25 | 79.47 |
| Os06t0524300-01 | Rice | nucleus | 68.34 | 68.68 |
| EER88427 | Sorghum | nucleus | 59.63 | 61.06 |
| Zm00001d046072_P001 | Maize | cytosol | 55.46 | 56.01 |
| HORVU7Hr1G082720.10 | Barley | cytosol, nucleus | 52.76 | 50.35 |
| KRG99688 | Soybean | cytosol | 3.56 | 42.65 |
| Bra037384.1-P | Field mustard | nucleus | 11.9 | 42.36 |
| GSMUA_Achr10P... | Banana | nucleus | 38.28 | 39.8 |
| GSMUA_Achr7P14150_001 | Banana | nucleus | 35.95 | 38.65 |
| GSMUA_Achr10P... | Banana | nucleus | 35.09 | 38.08 |
| GSMUA_Achr10P... | Banana | cytosol | 35.34 | 37.11 |
| CDX79176 | Canola | cytosol | 4.54 | 32.74 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 32.52 | 31.21 |
| CDY42041 | Canola | cytosol | 23.93 | 30.19 |
| CDX71720 | Canola | cytosol | 26.87 | 29.59 |
| CDY11374 | Canola | cytosol | 26.75 | 29.42 |
| CDY11373 | Canola | cytosol | 26.26 | 29.2 |
| Bra007625.1-P | Field mustard | cytosol | 26.38 | 29.01 |
| Bra004541.1-P | Field mustard | nucleus | 23.8 | 28.91 |
| CDX80013 | Canola | nucleus | 23.44 | 28.72 |
| AT3G61670.1 | Thale cress | nucleus | 27.24 | 28.1 |
| CDY48504 | Canola | nucleus | 19.14 | 27.71 |
| CDX90032 | Canola | nucleus | 19.02 | 27.68 |
| AT2G46380.1 | Thale cress | nucleus | 25.64 | 27.21 |
| KRH68892 | Soybean | nucleus | 30.18 | 27.21 |
| KRG97141 | Soybean | nucleus | 30.31 | 27.11 |
| CDX91876 | Canola | nucleus | 19.39 | 27.05 |
| Bra033264.1-P | Field mustard | nucleus | 19.26 | 27.02 |
| KRH06502 | Soybean | nucleus | 29.33 | 26.79 |
| CDY15177 | Canola | nucleus | 18.28 | 26.75 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 25.52 | 26.63 |
| PGSC0003DMT400032053 | Potato | nucleus | 30.8 | 26.53 |
| Bra000943.1-P | Field mustard | nucleus | 19.02 | 25.83 |
| Solyc08g082040.2.1 | Tomato | nucleus | 29.94 | 25.82 |
| KRH47938 | Soybean | nucleus | 28.22 | 25.73 |
| CDY67475 | Canola | nucleus | 18.65 | 25.72 |
| CDY07174 | Canola | nucleus | 19.02 | 24.37 |
| PGSC0003DMT400000290 | Potato | nucleus | 29.69 | 24.1 |
| AT1G01440.1 | Thale cress | nucleus | 19.26 | 23.64 |
| Solyc01g095590.2.1 | Tomato | nucleus | 27.98 | 23.58 |
| AT4G01090.1 | Thale cress | nucleus | 19.02 | 21.71 |
| HORVU3Hr1G055550.3 | Barley | nucleus | 20.49 | 21.06 |
| HORVU1Hr1G092980.14 | Barley | plastid | 22.21 | 20.64 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G021800.1 | EnsemblPlantsGene:HORVU0Hr1G021800 | InterPro:Zinc_ribbon_12 | ncoils:Coil | PANTHER:PTHR31105 | PANTHER:PTHR31105:SF7 |
| PFAM:PF11331 | SEG:seg | UniParc:UPI000B4698DC | UniProt:A0A287E6S9 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchrUn:-:113238177..113243269
Molecular Weight (calculated)
90191.1 Da
IEP (calculated)
6.805
GRAVY (calculated)
-0.692
Length
815 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGDEAGAAA AAAARIRVVR CPKCDKFLPE LPAYSVYVCG GCGATLQAKR KNSAQALDNS DNGNMKYLEV LESVPETSEA MAGASIEYKS VPNRLPPLHS
101: RSAYSRDNSR ITREASTSSV KANVRDDVRE AKYMRFRNVE NGETAHPVRA RGVSDVSPRA PVDSLPPNAC RGESPVNHHL KSRNTYSNRE HANDTDLDGP
201: SRVRDLEKDR AELLRMLDEL RDQVQQSCEV KGPNTSATVN RVADASSSYN IHERSSQFRH DPSQLHRKGT QHSSSMNMRD PSVPHIYGPL PTQQSLHGYV
301: EPIAHARTSS YPAGPYPWRN FDNYFFGQHD PDPLLSCHHE GFYHQAACSC SHCYHREFLP VQGTPLGFTD QRAPYLVNSY GAYPVDGPLL GQQRYNSRGA
401: NPSLQQHNLR ANVSKKPAQT CEPIAGGAPF TICYNCYEVL QLPNKRSLLG KEYKLRCGSC SHTIVIKLDG TRLDVSELAP SAHLSPAPQN GTGDDMADNL
501: LASVDERLLP PYAFSVASHQ SQEKDKHSNS SETDSKHTPL GTNSVDSPQS RDLPAEDNVI SRTPSLPRRD QCGFSPSEGS GIGSRSTRSE HEKVVLLTET
601: CKQNSIKDVC VANEMHSSDN EFDDPDYTQD VLNVPQDSGH IRATKAGDSF FSNLIKKSFK MNNGTRNGRA RVFVNGFPIP DRAVRKAEKL AGPIYPGDYW
701: YDYRAGFWGV VGQPCLGMIP PYIPEFNYPM PKSCGGGNTG IYINGRELHQ KDLDLLVSRG LSDSPERSYI VENSGKVTDE ASGEELYGLG KLAPTQYTEM
801: WIALWEDMIL WEFLN
101: RSAYSRDNSR ITREASTSSV KANVRDDVRE AKYMRFRNVE NGETAHPVRA RGVSDVSPRA PVDSLPPNAC RGESPVNHHL KSRNTYSNRE HANDTDLDGP
201: SRVRDLEKDR AELLRMLDEL RDQVQQSCEV KGPNTSATVN RVADASSSYN IHERSSQFRH DPSQLHRKGT QHSSSMNMRD PSVPHIYGPL PTQQSLHGYV
301: EPIAHARTSS YPAGPYPWRN FDNYFFGQHD PDPLLSCHHE GFYHQAACSC SHCYHREFLP VQGTPLGFTD QRAPYLVNSY GAYPVDGPLL GQQRYNSRGA
401: NPSLQQHNLR ANVSKKPAQT CEPIAGGAPF TICYNCYEVL QLPNKRSLLG KEYKLRCGSC SHTIVIKLDG TRLDVSELAP SAHLSPAPQN GTGDDMADNL
501: LASVDERLLP PYAFSVASHQ SQEKDKHSNS SETDSKHTPL GTNSVDSPQS RDLPAEDNVI SRTPSLPRRD QCGFSPSEGS GIGSRSTRSE HEKVVLLTET
601: CKQNSIKDVC VANEMHSSDN EFDDPDYTQD VLNVPQDSGH IRATKAGDSF FSNLIKKSFK MNNGTRNGRA RVFVNGFPIP DRAVRKAEKL AGPIYPGDYW
701: YDYRAGFWGV VGQPCLGMIP PYIPEFNYPM PKSCGGGNTG IYINGRELHQ KDLDLLVSRG LSDSPERSYI VENSGKVTDE ASGEELYGLG KLAPTQYTEM
801: WIALWEDMIL WEFLN
001: MAESSTIEAR LVRCPKCKNL LQEPKDCPFF QCGGCGTVLC AKNKDREADL LSVKSVENRS KEIEVTSGSS EEESDSNASL RHQQDGQTET WDVHNDPSSK
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q0WVG1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.