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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • nucleus 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G287800.1 Wheat nucleus, plastid 88.08 94.98
TraesCS7D01G290200.1 Wheat nucleus, plastid 87.79 94.67
TraesCS7B01G182400.1 Wheat nucleus, plastid 87.21 94.04
EES14795 Sorghum plastid 72.38 77.81
Zm00001d049346_P001 Maize plastid 69.48 74.22
VIT_09s0018g01880.t01 Wine grape nucleus 60.47 69.57
CDY37307 Canola nucleus 42.44 68.87
GSMUA_Achr2P05000_001 Banana cytosol 59.88 68.21
GSMUA_Achr9P19610_001 Banana cytosol 58.72 66.01
Bra023895.1-P Field mustard nucleus 58.43 65.69
KRH44644 Soybean nucleus 59.3 64.35
Solyc03g123840.2.1 Tomato nucleus 59.59 64.06
AT3G21215.1 Thale cress nucleus 61.92 62.83
PGSC0003DMT400023680 Potato plastid 59.01 61.14
CDY27533 Canola nucleus 60.47 60.64
KRH47009 Soybean nucleus 59.88 58.86
CDY06428 Canola nucleus 39.53 44.01
HORVU7Hr1G100830.1 Barley plastid 24.42 22.58
HORVU7Hr1G022410.5 Barley cytosol, nucleus, plastid 19.19 19.3
Protein Annotations
EnsemblPlants:HORVU7Hr1G067800.6EnsemblPlantsGene:HORVU7Hr1G067800Gene3D:3.30.70.330GO:GO:0003674GO:GO:0003676GO:GO:0003723
GO:GO:0003729GO:GO:0005488InterPro:IPR000504InterPro:IPR012677InterPro:Nucleotide-bd_a/b_plait_sfInterPro:RBD_domain_sf
InterPro:RRM_domPANTHER:PTHR45381PFAM:PF00076PFscan:PS50102SEG:segSMART:SM00360
SUPFAM:SSF54928UniParc:UPI000B4736BFUniProt:A0A287WRX0MapMan:35.2::
Description
No Description!
Coordinates
chrchr7H:+:356462123..356470928
Molecular Weight (calculated)
36612.0 Da
IEP (calculated)
9.288
GRAVY (calculated)
-0.185
Length
344 amino acids
Sequence
(BLAST)
001: LPSAITQSPP PVVRVRAVSM AGAGIHPFHQ QWPPAAAVPA PPAVPPPPPV PGAPDATARP GSDEVRTIFI TGLPVDVKER ELHNLLRWLP GFEASQINFK
101: GDQPMGFALF SYAHHAIAAK AVLQDLVFDA ETKSALHIEM AKKNLFIKRG GVGADANAMD QSKRLRTGGD YTHSPYAPPP FHPPPPAVSM WGTAGYMAAP
201: PPYNPYAGYP VPPVPIASPS PVPGPTAYAP VQNMKDNPPC NTLFIGNLVE TVVEEELRGL FSVQPGFKQM KVLRQDRNTV CFIEFDDVRA ASAVHHTLQG
301: AVVPSSGRGG MRIQFSKNPF GRRKDLVGGM VGTLNGAPAS GDVS
Best Arabidopsis Sequence Match ( AT3G21215.1 )
(BLAST)
001: MAGAGIHPYH QQWPPAGAPP PPAAVSSAAP PHPPPIHHHP PPPPVLVDNH NRPPYDELRT IFIAGLPDDV KERELLNLLR WLPGYEASQV NFKGEKPMGF
101: ALFSTAQFAM AAKDTLQHMV FDAESKSVIH TEMAKKNLFV KRGIVGDSNA YDQSKRLRTG GDCTHSVYSP SPFHPPPPPV WGPPHGYMAP APPPYDPYAG
201: YHAPPVPMPT PPPIAAPSSY VPVQNIKDNP PCNTLFIGNL GENINEEELR SLLSAQPGFK QMKILRQERH TVCFIEFEDV NSATNVHHNL QGAVIPSSGS
301: IGMRIQYSKN PYGKRKEGGG YSFFPSPSAN GAQGALTYQ
Arabidopsis Description
AT3G21215 protein [Source:UniProtKB/TrEMBL;Acc:Q9ASW4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.