Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 1
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
HORVU3Hr1G033190.1 | |
HORVU5Hr1G012110.2 | |
HORVU5Hr1G104870.1 | |
HORVU7Hr1G000410.34 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7A01G287800.1 | Wheat | nucleus, plastid | 88.08 | 94.98 |
TraesCS7D01G290200.1 | Wheat | nucleus, plastid | 87.79 | 94.67 |
TraesCS7B01G182400.1 | Wheat | nucleus, plastid | 87.21 | 94.04 |
EES14795 | Sorghum | plastid | 72.38 | 77.81 |
Zm00001d049346_P001 | Maize | plastid | 69.48 | 74.22 |
VIT_09s0018g01880.t01 | Wine grape | nucleus | 60.47 | 69.57 |
CDY37307 | Canola | nucleus | 42.44 | 68.87 |
GSMUA_Achr2P05000_001 | Banana | cytosol | 59.88 | 68.21 |
GSMUA_Achr9P19610_001 | Banana | cytosol | 58.72 | 66.01 |
Bra023895.1-P | Field mustard | nucleus | 58.43 | 65.69 |
KRH44644 | Soybean | nucleus | 59.3 | 64.35 |
Solyc03g123840.2.1 | Tomato | nucleus | 59.59 | 64.06 |
AT3G21215.1 | Thale cress | nucleus | 61.92 | 62.83 |
PGSC0003DMT400023680 | Potato | plastid | 59.01 | 61.14 |
CDY27533 | Canola | nucleus | 60.47 | 60.64 |
KRH47009 | Soybean | nucleus | 59.88 | 58.86 |
CDY06428 | Canola | nucleus | 39.53 | 44.01 |
HORVU7Hr1G100830.1 | Barley | plastid | 24.42 | 22.58 |
HORVU7Hr1G022410.5 | Barley | cytosol, nucleus, plastid | 19.19 | 19.3 |
Protein Annotations
EnsemblPlants:HORVU7Hr1G067800.6 | EnsemblPlantsGene:HORVU7Hr1G067800 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
GO:GO:0003729 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf |
InterPro:RRM_dom | PANTHER:PTHR45381 | PFAM:PF00076 | PFscan:PS50102 | SEG:seg | SMART:SM00360 |
SUPFAM:SSF54928 | UniParc:UPI000B4736BF | UniProt:A0A287WRX0 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr7H:+:356462123..356470928
Molecular Weight (calculated)
36612.0 Da
IEP (calculated)
9.288
GRAVY (calculated)
-0.185
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: LPSAITQSPP PVVRVRAVSM AGAGIHPFHQ QWPPAAAVPA PPAVPPPPPV PGAPDATARP GSDEVRTIFI TGLPVDVKER ELHNLLRWLP GFEASQINFK
101: GDQPMGFALF SYAHHAIAAK AVLQDLVFDA ETKSALHIEM AKKNLFIKRG GVGADANAMD QSKRLRTGGD YTHSPYAPPP FHPPPPAVSM WGTAGYMAAP
201: PPYNPYAGYP VPPVPIASPS PVPGPTAYAP VQNMKDNPPC NTLFIGNLVE TVVEEELRGL FSVQPGFKQM KVLRQDRNTV CFIEFDDVRA ASAVHHTLQG
301: AVVPSSGRGG MRIQFSKNPF GRRKDLVGGM VGTLNGAPAS GDVS
101: GDQPMGFALF SYAHHAIAAK AVLQDLVFDA ETKSALHIEM AKKNLFIKRG GVGADANAMD QSKRLRTGGD YTHSPYAPPP FHPPPPAVSM WGTAGYMAAP
201: PPYNPYAGYP VPPVPIASPS PVPGPTAYAP VQNMKDNPPC NTLFIGNLVE TVVEEELRGL FSVQPGFKQM KVLRQDRNTV CFIEFDDVRA ASAVHHTLQG
301: AVVPSSGRGG MRIQFSKNPF GRRKDLVGGM VGTLNGAPAS GDVS
001: MAGAGIHPYH QQWPPAGAPP PPAAVSSAAP PHPPPIHHHP PPPPVLVDNH NRPPYDELRT IFIAGLPDDV KERELLNLLR WLPGYEASQV NFKGEKPMGF
101: ALFSTAQFAM AAKDTLQHMV FDAESKSVIH TEMAKKNLFV KRGIVGDSNA YDQSKRLRTG GDCTHSVYSP SPFHPPPPPV WGPPHGYMAP APPPYDPYAG
201: YHAPPVPMPT PPPIAAPSSY VPVQNIKDNP PCNTLFIGNL GENINEEELR SLLSAQPGFK QMKILRQERH TVCFIEFEDV NSATNVHHNL QGAVIPSSGS
301: IGMRIQYSKN PYGKRKEGGG YSFFPSPSAN GAQGALTYQ
101: ALFSTAQFAM AAKDTLQHMV FDAESKSVIH TEMAKKNLFV KRGIVGDSNA YDQSKRLRTG GDCTHSVYSP SPFHPPPPPV WGPPHGYMAP APPPYDPYAG
201: YHAPPVPMPT PPPIAAPSSY VPVQNIKDNP PCNTLFIGNL GENINEEELR SLLSAQPGFK QMKILRQERH TVCFIEFEDV NSATNVHHNL QGAVIPSSGS
301: IGMRIQYSKN PYGKRKEGGG YSFFPSPSAN GAQGALTYQ
Arabidopsis Description
AT3G21215 protein [Source:UniProtKB/TrEMBL;Acc:Q9ASW4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.