Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37307 | Canola | nucleus | 56.93 | 91.04 |
| Bra023895.1-P | Field mustard | nucleus | 79.65 | 88.24 |
| CDY27533 | Canola | nucleus | 89.09 | 88.05 |
| VIT_09s0018g01880.t01 | Wine grape | nucleus | 73.75 | 83.61 |
| KRH44644 | Soybean | nucleus | 67.55 | 72.24 |
| Solyc03g123840.2.1 | Tomato | nucleus | 65.19 | 69.06 |
| GSMUA_Achr2P05000_001 | Banana | cytosol | 61.36 | 68.87 |
| PGSC0003DMT400023680 | Potato | plastid | 65.78 | 67.17 |
| TraesCS7A01G287800.1 | Wheat | nucleus, plastid | 62.83 | 66.77 |
| TraesCS7D01G290200.1 | Wheat | nucleus, plastid | 62.54 | 66.46 |
| GSMUA_Achr9P19610_001 | Banana | cytosol | 59.88 | 66.34 |
| TraesCS7B01G182400.1 | Wheat | nucleus, plastid | 62.24 | 66.14 |
| Zm00001d049346_P001 | Maize | plastid | 62.24 | 65.53 |
| EES14795 | Sorghum | plastid | 61.65 | 65.31 |
| KRH47009 | Soybean | nucleus | 66.96 | 64.86 |
| HORVU7Hr1G067800.6 | Barley | plastid | 62.83 | 61.92 |
| CDY06428 | Canola | nucleus | 50.15 | 55.02 |
| AT2G42240.4 | Thale cress | nucleus | 26.25 | 29.47 |
| AT3G13700.1 | Thale cress | nucleus | 23.01 | 26.35 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.2 | EntrezGene:821675 | ProteinID:AEE76477.1 | EMBL:AF361632 | EMBL:AK118175 |
| EMBL:AK226266 | EMBL:AK317062 | ProteinID:ANM64409.1 | ProteinID:ANM64411.1 | ArrayExpress:AT3G21215 | EnsemblPlantsGene:AT3G21215 |
| RefSeq:AT3G21215 | TAIR:AT3G21215 | RefSeq:AT3G21215-TAIR-G | EnsemblPlants:AT3G21215.1 | TAIR:AT3G21215.1 | EMBL:AY143892 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0005488 | InterPro:IPR000504 |
| InterPro:IPR012677 | RefSeq:NP_001326439.1 | RefSeq:NP_001326441.1 | RefSeq:NP_683582.2 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 |
| PO:PO:0000293 | PFscan:PS50102 | PANTHER:PTHR45381 | UniProt:Q9ASW4 | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI00000AC640 | SEG:seg | : | : |
Description
AT3G21215 protein [Source:UniProtKB/TrEMBL;Acc:Q9ASW4]
Coordinates
chr3:-:7441451..7445312
Molecular Weight (calculated)
36981.9 Da
IEP (calculated)
7.815
GRAVY (calculated)
-0.503
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAGIHPYH QQWPPAGAPP PPAAVSSAAP PHPPPIHHHP PPPPVLVDNH NRPPYDELRT IFIAGLPDDV KERELLNLLR WLPGYEASQV NFKGEKPMGF
101: ALFSTAQFAM AAKDTLQHMV FDAESKSVIH TEMAKKNLFV KRGIVGDSNA YDQSKRLRTG GDCTHSVYSP SPFHPPPPPV WGPPHGYMAP APPPYDPYAG
201: YHAPPVPMPT PPPIAAPSSY VPVQNIKDNP PCNTLFIGNL GENINEEELR SLLSAQPGFK QMKILRQERH TVCFIEFEDV NSATNVHHNL QGAVIPSSGS
301: IGMRIQYSKN PYGKRKEGGG YSFFPSPSAN GAQGALTYQ
101: ALFSTAQFAM AAKDTLQHMV FDAESKSVIH TEMAKKNLFV KRGIVGDSNA YDQSKRLRTG GDCTHSVYSP SPFHPPPPPV WGPPHGYMAP APPPYDPYAG
201: YHAPPVPMPT PPPIAAPSSY VPVQNIKDNP PCNTLFIGNL GENINEEELR SLLSAQPGFK QMKILRQERH TVCFIEFEDV NSATNVHHNL QGAVIPSSGS
301: IGMRIQYSKN PYGKRKEGGG YSFFPSPSAN GAQGALTYQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.