Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G432900.1 | Wheat | nucleus | 75.27 | 88.33 |
| TraesCS7A01G443800.1 | Wheat | nucleus | 75.0 | 88.01 |
| TraesCS7B01G342500.1 | Wheat | nucleus | 74.73 | 87.7 |
| EER88849 | Sorghum | nucleus | 55.11 | 66.13 |
| Zm00001d014533_P001 | Maize | extracellular | 54.57 | 65.06 |
| GSMUA_Achr10P... | Banana | nucleus | 19.89 | 58.73 |
| Os06t0687500-01 | Rice | plastid | 30.65 | 52.05 |
| GSMUA_Achr9P11330_001 | Banana | nucleus | 42.74 | 49.84 |
| Solyc02g093120.2.1 | Tomato | nucleus | 25.0 | 48.95 |
| VIT_07s0031g00180.t01 | Wine grape | nucleus, plastid | 41.67 | 46.55 |
| PGSC0003DMT400010226 | Potato | nucleus | 38.71 | 45.57 |
| KRH77037 | Soybean | nucleus | 40.59 | 45.35 |
| KRH28438 | Soybean | nucleus | 40.32 | 44.38 |
| AT2G42240.4 | Thale cress | nucleus | 33.87 | 41.72 |
| GSMUA_Achr10P... | Banana | nucleus | 28.49 | 40.93 |
| CDY22555 | Canola | nucleus | 32.8 | 36.86 |
| HORVU7Hr1G067800.6 | Barley | plastid | 22.58 | 24.42 |
| HORVU7Hr1G022410.5 | Barley | cytosol, nucleus, plastid | 22.31 | 24.27 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G100830.1 | EnsemblPlantsGene:HORVU7Hr1G100830 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| PANTHER:PTHR45381 | PFAM:PF00076 | PFscan:PS50102 | SEG:seg | SMART:SM00360 | SUPFAM:SSF54928 |
| UniParc:UPI000B46FF98 | UniProt:A0A287XKN5 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:606517930..606522297
Molecular Weight (calculated)
40084.6 Da
IEP (calculated)
10.088
GRAVY (calculated)
-0.745
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: RPRPPQIGNP NPNDPARGRP STAADSAGRR RKPSTQAAAA APPPLPARAA RMAASYYNPP PPRAASSSYA TLPPPPPGTS SYDTYRQHEH AYLAAPPPPA
101: YGGYFDRAEP LAPPRDELRT LFIAGLPADV KPREVYNLFR DFPGYVSSHV RSGKSAQSYA FAVFGDQPSA LAAMSATNGL VFDLEKNCSI HVDLAKSNSR
201: STSSKRPRSD YEDFPKSTGK KARSPRGRPD SGAGSNNHMS GMGNSSHSLN GYPAQSYTDF GSSAAFSKDP SMFAPQNNPP CPTLFVANLG QTVSERELTD
301: VFSGCEGFIK LKMQNKFGAP VAFVDFKDDH SSTEALNRLQ GAILHSSSGE GMRLEYAKSR MGLRKQRDNN RS
101: YGGYFDRAEP LAPPRDELRT LFIAGLPADV KPREVYNLFR DFPGYVSSHV RSGKSAQSYA FAVFGDQPSA LAAMSATNGL VFDLEKNCSI HVDLAKSNSR
201: STSSKRPRSD YEDFPKSTGK KARSPRGRPD SGAGSNNHMS GMGNSSHSLN GYPAQSYTDF GSSAAFSKDP SMFAPQNNPP CPTLFVANLG QTVSERELTD
301: VFSGCEGFIK LKMQNKFGAP VAFVDFKDDH SSTEALNRLQ GAILHSSSGE GMRLEYAKSR MGLRKQRDNN RS
001: MDDLEAYYSH YNLPAMVPPP PPGVSPIPIT SAHSVYLPTH VSIGARDEVR TLFVAGLPED VKPREIYNLF REFPGYETSH LRSSDGAKPF AFAVFSDLQS
101: AVAVMHALNG MVFDLEKHST LHIDLAKSNP KSKRSRTDDG WESLKKLKSW NTTTESGFGS FQTPGMSSSA YNTIGYSPAQ SQGIANVAGR APTSRKPSKA
201: ADPCPTLFIA NMGPNCTEAE LIQVFSRCRG FLKLKIQGTY GTPVAFVDFQ DVSCSSEALH TLQGTVLYSS LTGEVLRLQY ARSRMGMRKK IN
101: AVAVMHALNG MVFDLEKHST LHIDLAKSNP KSKRSRTDDG WESLKKLKSW NTTTESGFGS FQTPGMSSSA YNTIGYSPAQ SQGIANVAGR APTSRKPSKA
201: ADPCPTLFIA NMGPNCTEAE LIQVFSRCRG FLKLKIQGTY GTPVAFVDFQ DVSCSSEALH TLQGTVLYSS LTGEVLRLQY ARSRMGMRKK IN
Arabidopsis Description
Putative RNA-binding protein [Source:UniProtKB/TrEMBL;Acc:Q0WQM7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.