Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G062400.2 | Wheat | cytosol | 90.09 | 89.95 |
| TraesCS5B01G057300.1 | Wheat | cytosol | 89.78 | 89.64 |
| TraesCS5A01G051400.2 | Wheat | nucleus | 88.24 | 79.61 |
| Zm00001d010928_P001 | Maize | nucleus | 60.99 | 59.79 |
| KXG21224 | Sorghum | cytosol | 57.89 | 57.01 |
| Os05t0133900-02 | Rice | nucleus | 58.67 | 55.74 |
| HORVU7Hr1G000410.34 | Barley | mitochondrion | 47.06 | 51.35 |
| HORVU4Hr1G017920.1 | Barley | cytosol | 6.19 | 49.38 |
| GSMUA_Achr10P... | Banana | cytosol | 23.07 | 34.98 |
| KRH50633 | Soybean | cytosol | 37.15 | 34.58 |
| VIT_05s0020g00450.t01 | Wine grape | nucleus | 37.93 | 34.41 |
| KRH02428 | Soybean | nucleus | 37.62 | 33.33 |
| HORVU3Hr1G098990.3 | Barley | cytosol, nucleus | 22.14 | 31.43 |
| HORVU7Hr1G000490.1 | Barley | cytosol | 1.55 | 31.25 |
| HORVU0Hr1G018360.1 | Barley | cytosol, peroxisome | 20.12 | 29.95 |
| Solyc05g053260.2.1 | Tomato | cytosol | 25.23 | 29.06 |
| CDX95858 | Canola | cytosol | 31.73 | 29.0 |
| AT3G17310.1 | Thale cress | cytosol | 31.58 | 28.73 |
| CDY13817 | Canola | plastid | 23.07 | 27.29 |
| Bra031188.1-P | Field mustard | nucleus | 24.15 | 27.27 |
| CDX82030 | Canola | endoplasmic reticulum | 23.22 | 26.69 |
| HORVU6Hr1G081790.1 | Barley | nucleus | 21.98 | 26.3 |
| HORVU3Hr1G098970.1 | Barley | nucleus | 19.97 | 25.44 |
| HORVU6Hr1G032260.8 | Barley | nucleus, peroxisome | 22.29 | 24.45 |
| HORVU4Hr1G089730.3 | Barley | nucleus | 13.16 | 23.81 |
| CDX92125 | Canola | plasma membrane, vacuole | 31.73 | 23.19 |
| Bra022208.1-P | Field mustard | plasma membrane, vacuole | 31.89 | 22.99 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G012110.2 | EnsemblPlantsGene:HORVU5Hr1G012110 | Gene3D:3.40.50.150 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006306 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | InterPro:IPR030380 | InterPro:SAM-dependent_MTases | InterPro:SAM_MeTfrase_DRM |
| PANTHER:PTHR23068 | PANTHER:PTHR23068:SF11 | PFscan:PS51680 | SEG:seg | SUPFAM:SSF53335 | UniParc:UPI000B47CF46 |
| UniProt:A0A287QD39 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:33869587..33877900
Molecular Weight (calculated)
72007.9 Da
IEP (calculated)
4.952
GRAVY (calculated)
-0.405
Length
646 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKIEDCDGD VAADPPQPNP APAPAAVKAE EAIDDGQPSS SSSYLRSHFI GMGFSPVLVD KMLRKHGDHD SNAILESLLS HPNSGSESSS SLGSLFDSDN
101: EENNSNQDIK PEPDSYLEKR SYLLQTMNFS QTEVDLAFEQ LGEDALLDQL VDFIVTAQGG VFSGDMENGH ATNEVKAESL FGVMDKTLHL LQMGFTEEEV
201: SLAIDSFGQE AAVPELADSI FARRIASTIE QKQVKIESEF QGEQETEYST YHQRLNYYDD DDDKLRAKRA KHIFRDDRGA SSSHAVNQPS FTPWLSGCAG
301: SAGDGYLKEE DYEMTSGPRA NVHADLAKPP FFLYGNVVNI TKAAWSELSD FLLSVQPEFI NSQLFSALMR REGYLHNLPT ERRHVVVPKS PMTIEDAVPS
401: TRHYWPTWDT RKHIGNVTSE VAGIEQLCET LGKTIKDSRG FLSEEKRAQI LHQCKMANLI WIGQDRLGPL QPNQMERILG YPPNHTSLFT LNPPDRIAAM
501: KYAFQTDTIA YVLSVLKDIY PNGLRVLSIY SGVGGAEVAL HRLGIPLKCV VSIEESDVNR KILKRWWAKT EQSGVLRQLP GIWKLKTDVL EDLFKEFGGF
601: DLVVGGNYDS CRGGTTVNAA MGMDSKKYFE FVRVLNRVRS MHALFK
101: EENNSNQDIK PEPDSYLEKR SYLLQTMNFS QTEVDLAFEQ LGEDALLDQL VDFIVTAQGG VFSGDMENGH ATNEVKAESL FGVMDKTLHL LQMGFTEEEV
201: SLAIDSFGQE AAVPELADSI FARRIASTIE QKQVKIESEF QGEQETEYST YHQRLNYYDD DDDKLRAKRA KHIFRDDRGA SSSHAVNQPS FTPWLSGCAG
301: SAGDGYLKEE DYEMTSGPRA NVHADLAKPP FFLYGNVVNI TKAAWSELSD FLLSVQPEFI NSQLFSALMR REGYLHNLPT ERRHVVVPKS PMTIEDAVPS
401: TRHYWPTWDT RKHIGNVTSE VAGIEQLCET LGKTIKDSRG FLSEEKRAQI LHQCKMANLI WIGQDRLGPL QPNQMERILG YPPNHTSLFT LNPPDRIAAM
501: KYAFQTDTIA YVLSVLKDIY PNGLRVLSIY SGVGGAEVAL HRLGIPLKCV VSIEESDVNR KILKRWWAKT EQSGVLRQLP GIWKLKTDVL EDLFKEFGGF
601: DLVVGGNYDS CRGGTTVNAA MGMDSKKYFE FVRVLNRVRS MHALFK
001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
Arabidopsis Description
DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.