Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G057300.1 | Wheat | cytosol | 86.59 | 95.83 |
| TraesCS5D01G062400.2 | Wheat | cytosol | 86.03 | 95.21 |
| HORVU5Hr1G012110.2 | Barley | cytosol | 79.61 | 88.24 |
| Zm00001d010928_P001 | Maize | nucleus | 54.05 | 58.73 |
| TraesCS4A01G495700.1 | Wheat | cytosol | 39.8 | 57.0 |
| Os05t0133900-02 | Rice | nucleus | 53.35 | 56.18 |
| KXG21224 | Sorghum | cytosol | 50.98 | 55.64 |
| TraesCS7A01G002900.3 | Wheat | plastid | 44.27 | 50.88 |
| TraesCS6A01G124200.1 | Wheat | peroxisome | 11.45 | 38.32 |
| GSMUA_Achr10P... | Banana | cytosol | 20.53 | 34.51 |
| KRH50633 | Soybean | cytosol | 33.24 | 34.29 |
| VIT_05s0020g00450.t01 | Wine grape | nucleus | 34.08 | 34.27 |
| KRH02428 | Soybean | nucleus | 33.66 | 33.06 |
| AT3G17310.1 | Thale cress | cytosol | 30.03 | 30.28 |
| CDX95858 | Canola | cytosol | 29.75 | 30.13 |
| TraesCS3A01G461200.1 | Wheat | cytosol, nucleus, peroxisome | 20.39 | 29.92 |
| Solyc05g053260.2.1 | Tomato | cytosol | 22.21 | 28.34 |
| TraesCS4A01G267400.1 | Wheat | nucleus | 16.76 | 28.04 |
| CDY13817 | Canola | plastid | 20.95 | 27.47 |
| Bra031188.1-P | Field mustard | nucleus | 21.79 | 27.27 |
| CDX82030 | Canola | endoplasmic reticulum | 21.23 | 27.05 |
| TraesCS3A01G461300.1 | Wheat | cytosol, nucleus, peroxisome | 19.55 | 26.27 |
| TraesCS6A01G338800.1 | Wheat | nucleus | 21.65 | 25.62 |
| TraesCS6A01G163300.1 | Wheat | cytosol, nucleus, peroxisome | 20.11 | 24.91 |
| TraesCS5A01G553300.3 | Wheat | nucleus | 21.09 | 24.75 |
| TraesCS5A01G241800.1 | Wheat | nucleus | 21.23 | 24.6 |
| CDX92125 | Canola | plasma membrane, vacuole | 29.47 | 23.87 |
| Bra022208.1-P | Field mustard | plasma membrane, vacuole | 29.75 | 23.77 |
| TraesCS3A01G461500.1 | Wheat | nucleus | 20.39 | 22.74 |
| TraesCS3A01G067600.1 | Wheat | nucleus | 20.95 | 19.76 |
Protein Annotations
| Gene3D:3.30.420.10 | Gene3D:3.40.50.150 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006306 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| InterPro:IPR030380 | InterPro:IPR036397 | PFscan:PS51680 | PANTHER:PTHR23068 | PANTHER:PTHR23068:SF11 | InterPro:RNaseH-like_sf |
| InterPro:RNaseH_sf | InterPro:SAM-dependent_MTases | InterPro:SAM_MeTfrase_DRM | SUPFAM:SSF53098 | SUPFAM:SSF53335 | EnsemblPlantsGene:TraesCS5A01G051400 |
| EnsemblPlants:TraesCS5A01G051400.2 | TIGR:cd02440 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5A:-:46572723..46587856
Molecular Weight (calculated)
79802.9 Da
IEP (calculated)
5.410
GRAVY (calculated)
-0.453
Length
716 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKIEDCDGD GAADPPQPNP APAPTAVKAE EAIDDGQPGT SSSYLRSHFI GMGFSPLLVD KMLQKHGDHD SNTILESLLS HHNSGSESSS SLGSLFDSDN
101: EENSSKQDIK PEPDSFLERR SYLLRTMNFS QTEVDLAFDQ LGEDALLDQL VDFIVTAQGG VLSGDMENGH ATNEVKAESL FGVMDKTLHL LQMGFTEEEV
201: SLAIDSFDSA GEYISHALRG FLVEQGTLTQ FSGPNAHAQN GVAERKHRHL LETARAMMVA AYLPPHFSSN SWWINKSQEA AVQELADSIF ARRIASTIEQ
301: KQVKIESEFL GEHGEQETEY STYHQRLNYY DDDDDNKRVK KAKHIFRDDR GASSSHAVNQ PTPWLSGGVG SAGDGYLKEE DYEMTSGPRA NVRGDLAKPP
401: FFLYGNVVNI TKDAWSEISG FLSGVQPEFI NSQLFSALMR REGYLHNLPT ERRHVVVPKS PMTIEDAVPS ARHYWPTWDT RKHIGSVTSE VAGIEQLCEM
501: LGKTIKDSRG FLSEEKRAQI LHQCKMANLI WIGQDRLGPL QPNQMERILG YPSNHTNLFG LNPPDRIGAM KYAFQTDTIA YLLSVLKDIY PDGLRVLSIY
601: SGVGGAEIAL HRLGIPLKCV VSVEESDVNR KILKRWWAKT EQSGVLRQLN GIWKLKTDAL EDLFKEFGGF DLVVGGNYSS YRGGTTVNAT MGMDSGKYFE
701: YVRVLQRVRS MQHFFK
101: EENSSKQDIK PEPDSFLERR SYLLRTMNFS QTEVDLAFDQ LGEDALLDQL VDFIVTAQGG VLSGDMENGH ATNEVKAESL FGVMDKTLHL LQMGFTEEEV
201: SLAIDSFDSA GEYISHALRG FLVEQGTLTQ FSGPNAHAQN GVAERKHRHL LETARAMMVA AYLPPHFSSN SWWINKSQEA AVQELADSIF ARRIASTIEQ
301: KQVKIESEFL GEHGEQETEY STYHQRLNYY DDDDDNKRVK KAKHIFRDDR GASSSHAVNQ PTPWLSGGVG SAGDGYLKEE DYEMTSGPRA NVRGDLAKPP
401: FFLYGNVVNI TKDAWSEISG FLSGVQPEFI NSQLFSALMR REGYLHNLPT ERRHVVVPKS PMTIEDAVPS ARHYWPTWDT RKHIGSVTSE VAGIEQLCEM
501: LGKTIKDSRG FLSEEKRAQI LHQCKMANLI WIGQDRLGPL QPNQMERILG YPSNHTNLFG LNPPDRIGAM KYAFQTDTIA YLLSVLKDIY PDGLRVLSIY
601: SGVGGAEIAL HRLGIPLKCV VSVEESDVNR KILKRWWAKT EQSGVLRQLN GIWKLKTDAL EDLFKEFGGF DLVVGGNYSS YRGGTTVNAT MGMDSGKYFE
701: YVRVLQRVRS MQHFFK
001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
Arabidopsis Description
DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.