Factsheet for TraesCS5B01G057300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G062400.2	Wheat	cytosol	97.68	97.68
HORVU5Hr1G012110.2	Barley	cytosol	89.64	89.78
TraesCS5A01G051400.2	Wheat	nucleus	95.83	86.59
Zm00001d010928_P001	Maize	nucleus	60.59	59.48
KXG21224	Sorghum	cytosol	56.88	56.1
Os05t0133900-02	Rice	nucleus	58.58	55.74
TraesCS4B01G388300.1	Wheat	cytosol	11.75	38.19
KRH50633	Soybean	cytosol	37.56	35.01
VIT_05s0020g00450.t01	Wine grape	nucleus	38.33	34.83
GSMUA_Achr10P...	Banana	cytosol	22.72	34.51
KRH02428	Soybean	nucleus	37.71	33.47
TraesCS3B01G503900.1	Wheat	peroxisome	21.33	30.6
AT3G17310.1	Thale cress	cytosol	33.08	30.14
CDX95858	Canola	cytosol	32.92	30.13
TraesCS4B01G012300.2	Wheat	cytosol	14.06	28.62
Solyc05g053260.2.1	Tomato	cytosol	24.73	28.52
CDY13817	Canola	plastid	23.65	28.02
Bra031188.1-P	Field mustard	nucleus	24.57	27.8
CDX82030	Canola	endoplasmic reticulum	23.8	27.4
TraesCS3B01G504000.1	Wheat	nucleus	22.1	26.78
TraesCS4B01G047000.1	Wheat	nucleus	24.88	26.74
TraesCS6B01G186600.1	Wheat	nucleus	22.72	25.74
TraesCS4B01G390500.4	Wheat	nucleus	23.8	25.62
TraesCS5B01G239800.1	Wheat	nucleus	23.49	25.59
TraesCS6B01G369700.1	Wheat	nucleus	23.49	25.12
TraesCS4B01G334900.1	Wheat	nucleus	23.18	24.88
TraesCS4B01G388900.2	Wheat	nucleus	23.18	24.88
TraesCS3B01G504200.1	Wheat	nucleus	22.72	24.18
CDX92125	Canola	plasma membrane, vacuole	32.61	23.87
Bra022208.1-P	Field mustard	plasma membrane, vacuole	32.92	23.77
TraesCS6B01G107600.1	Wheat	nucleus	21.95	22.76
TraesCS6B01G152200.1	Wheat	mitochondrion	12.83	17.36

Protein Annotations

EnsemblPlants:TraesCS5B01G057300.1	EnsemblPlantsGene:TraesCS5B01G057300	Gene3D:3.40.50.150	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0006306	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	InterPro:IPR030380	InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM	PANTHER:PTHR23068	PANTHER:PTHR23068:SF11
PFscan:PS51680	SEG:seg	SUPFAM:SSF53335	TIGR:cd02440	MapMan:35.1	:

Description

No Description!

Coordinates

chr5B:-:63362427..63378328

Molecular Weight (calculated)

72022.7 Da

IEP (calculated)

5.003

GRAVY (calculated)

-0.471

Length

647 amino acids

Sequence
(BLAST)

001: MVKIEDCDGD GAADPPQPNP APAPTAVKAE EAIDDGQPGS SSSYLRSHFI GMGFSPILVD KMLQKHGDHD SNTVLESLLS HHNSGSESSS SLGSLFDSDN
101: EENSSKQDIK PEPDSFSERR SYLLRTMNFS QTEVDLAFDQ LGEDALLDQL VDFIVTAQGG VLSGDMENGH ATNEVKAESL FGVMDKTLHL LQMGFTEEEV
201: SLAIDSFGQE AAVQELADSI FARRIASTIE QKQVKIESEF LGEQGDQETE YSTYHQRLNY YDDDDDNKRV KKAKHIFRDD RGASSSHAVN QPTPWLSGGV
301: GSAGDGYLKE EDYEMTSGPR ANVRGDLAKP PFFLYGNVVN ITKDAWSEIS GFLSGVQPEF INSQLFSALM RREGYLHNLP TERRHVAVPK SPMTIEDAVP
401: SARHYWPTWD TRKHIGSVTS EVAGIEQLCE MLGKTIKDSR GFLSEEKRAQ ILHQCKMANL IWIGQDRLGH LQPNQMERIL GYPSNHTNLF GLNPPDRIAA
501: MKYAFQTDTI AYLLSVLKDI YPDGLRVLSI YSGVGGAEIA LHRLGIPLKC VVSVEESDVN RKILKKWWAK TEQSGVLRQL NGIWKLKTDA LEDLFKEFGG
601: FDLVVGGNYS SYRGGTTVNA TMGMDSGKYF EYVRVLQRVR SMQHFYK

Best Arabidopsis Sequence Match ( AT3G17310.2 )
(BLAST)

001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM

Arabidopsis Description

DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.