Factsheet for TraesCS3B01G504200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G388300.1	Wheat	cytosol	24.51	74.87
TraesCS3B01G503900.1	Wheat	peroxisome	54.44	73.39
HORVU3Hr1G098970.1	Barley	nucleus	59.87	71.79
TraesCS3A01G461500.1	Wheat	nucleus	73.52	69.63
TraesCS3B01G504000.1	Wheat	nucleus	58.72	66.85
Os11t0109200-00	Rice	plastid	17.93	65.27
TraesCS6B01G369700.1	Wheat	nucleus	60.2	60.5
TraesCS4B01G388900.2	Wheat	nucleus	58.39	58.87
TraesCS5B01G239800.1	Wheat	nucleus	57.4	58.75
TraesCS4B01G390500.4	Wheat	nucleus	57.4	58.07
TraesCS4B01G334900.1	Wheat	nucleus	57.24	57.71
Zm00001d044187_P001	Maize	cytosol	23.19	57.55
TraesCS6B01G107600.1	Wheat	nucleus	54.28	52.88
EER95283	Sorghum	nucleus	49.18	51.91
Os03t0110800-01	Rice	nucleus	50.0	50.92
TraesCS6B01G186600.1	Wheat	nucleus	47.7	50.79
Zm00001d048516_P001	Maize	nucleus	48.52	48.92
OQU87185	Sorghum	cytosol	18.75	48.31
TraesCS4B01G047000.1	Wheat	nucleus	47.7	48.17
OQU93413	Sorghum	nucleus	48.03	48.11
EES00541	Sorghum	nucleus	47.2	47.2
Os12t0108900-00	Rice	cytosol, nucleus	26.81	45.79
Zm00001d027329_P002	Maize	nucleus	48.68	41.87
TraesCS4B01G012300.2	Wheat	cytosol	21.38	40.88
TraesCS6B01G152200.1	Wheat	mitochondrion	30.26	38.49
TraesCS5B01G057300.1	Wheat	cytosol	24.18	22.72

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:1.10.8.10	MapMan:12.5.1.11	Gene3D:3.40.50.150	InterPro:C5_MeTfrase	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006259	GO:GO:0006306
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	InterPro:IPR001525
InterPro:IPR015940	InterPro:IPR030380	PFAM:PF00145	PFscan:PS50030	PFscan:PS51680	PANTHER:PTHR23068
PANTHER:PTHR23068:SF3	InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF46934	SUPFAM:SSF53335	EnsemblPlantsGene:TraesCS3B01G504200
EnsemblPlants:TraesCS3B01G504200.1	InterPro:UBA	InterPro:UBA-like_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chr3B:+:748611498..748616981

Molecular Weight (calculated)

68514.6 Da

IEP (calculated)

8.366

GRAVY (calculated)

-0.209

Length

608 amino acids

Sequence
(BLAST)

001: MFQNSYLSGS SPHAFELYIH LDWKLPSSSP SLVKRYVAMG FPKEMVVTSI KEIGHSDQNA LLELLLTYKV YCEGVETECI AVLLVCNFDE LENLFVLDIT
101: LFSSNSKFAN QLCPLVYFVV QDIVYSRSDM RRVRKEVEAK LDNDFVQEMF EKDEKINSLV DMGFSEDEAN MAIIRCGVDG DLSVLVHSIS ASRVAGNLNL
201: SNHQNIAICV HLWQVMGGCF DSFGGRKKAR LVEERKKKRK RCGCTGQSNQ PSLDCNHDED MLIPNPMVGF NLPNYSLPLV RVTRRILEQD MGPPYFYYEN
301: VARAPTGVWA TISRSLYDIQ PEFVDSKHLC ATARKRGYIH NLPIENRAPL LPLPPMTIFE AFPRYKKWWP SWDQRTQFNC LLTGVAGPKL TGKIGRALAS
401: ANTPPSQSIQ KYVIDHCKRY NLVWVGKNKV AKLEPQEIEY LLGFPKDHTR GLGDTNRYKS LGNSFHVDTV AYHLSVLKGM FPNGVNVLSL FTGIGGGEVA
501: LHRLGINMRT VVSVEIDKAS KRIFRDWWNQ TQTGTLIEID DVKSLTDDQV ATYVTTFGGF DLVIGGSPCN NLAGCNRSSR HGLEGKQSVL FHHYVRILNA
601: VKSAMARK

Best Arabidopsis Sequence Match ( AT3G17310.1 )
(BLAST)

001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM

Arabidopsis Description

DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.