Factsheet for TraesCS4B01G388300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G124200.1	Wheat	peroxisome	70.85	65.89
Os11t0109200-00	Rice	plastid	54.77	65.27
Zm00001d044187_P001	Maize	cytosol	56.78	46.12
TraesCS3B01G503900.1	Wheat	peroxisome	78.89	34.81
TraesCS4B01G334900.1	Wheat	nucleus	92.96	30.68
TraesCS4B01G388900.2	Wheat	nucleus	86.93	28.69
TraesCS3B01G504000.1	Wheat	nucleus	75.38	28.09
TraesCS4B01G390500.4	Wheat	nucleus	83.92	27.79
TraesCS5B01G239800.1	Wheat	nucleus	81.41	27.27
TraesCS6B01G369700.1	Wheat	nucleus	81.91	26.94
TraesCS6B01G107600.1	Wheat	nucleus	79.9	25.48
TraesCS3B01G504200.1	Wheat	nucleus	74.87	24.51
Os03t0110800-01	Rice	nucleus	72.36	24.12
EER95283	Sorghum	nucleus	68.34	23.61
TraesCS4B01G047000.1	Wheat	nucleus	69.35	22.92
OQU93413	Sorghum	nucleus	68.34	22.41
Zm00001d048516_P001	Maize	nucleus	67.84	22.39
EES00541	Sorghum	nucleus	67.84	22.2
TraesCS6B01G186600.1	Wheat	nucleus	62.31	21.72
Zm00001d027329_P002	Maize	nucleus	68.84	19.38
TraesCS5B01G057300.1	Wheat	cytosol	38.19	11.75
Os12t0108900-00	Rice	cytosol, nucleus	19.1	10.67
TraesCS4B01G012300.2	Wheat	cytosol	16.58	10.38
TraesCS6B01G152200.1	Wheat	mitochondrion	23.62	9.83
OQU87185	Sorghum	cytosol	1.51	1.27

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:3.40.50.150	MapMan:50.2.1	InterPro:C5_MeTfrase	GO:GO:0003674	GO:GO:0003824
GO:GO:0006139	GO:GO:0006259	GO:GO:0006306	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009987	GO:GO:0016740	InterPro:IPR001525	InterPro:IPR030380	PFAM:PF00145	PFscan:PS51680
PANTHER:PTHR23068	PANTHER:PTHR23068:SF3	InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF53335	EnsemblPlantsGene:TraesCS4B01G388300
EnsemblPlants:TraesCS4B01G388300.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:+:665559825..665560629

Molecular Weight (calculated)

22334.1 Da

IEP (calculated)

9.966

GRAVY (calculated)

-0.144

Length

199 amino acids

Sequence
(BLAST)

001: MDECKKWNLV WVGKNKVAPL EPHEMEFLLG FPKDHTRGVG KTQRYKSLGN SFQVDTVAYH LSVLRRMFPN GVRVLSLFTG IGGGEVALHK LGIHMRVVVS
101: VEIGEANRRI LRGWWDQTQT GTLFEIPNVK SLTDERVASF VSRFGGFDLV IGGSPCNNLA GSNRHHRDGL EGKHSALFYD YVRILNFVKS AMGTQFIVC

Best Arabidopsis Sequence Match ( AT5G14620.1 )
(BLAST)

001: MVIWNNDDDD FLEIDNFQSS PRSSPIHAMQ CRVENLAGVA VTTSSLSSPT ETTDLVQMGF SDEVFATLFD MGFPVEMISR AIKETGPNVE TSVIIDTISK
101: YSSDCEAGSS KSKAIDHFLA MGFDEEKVVK AIQEHGEDNM EAIANALLSC PEAKKLPAAV EEEDGIDWSS SDDDTNYTDM LNSDDEKDPN SNENGSKIRS
201: LVKMGFSELE ASLAVERCGE NVDIAELTDF LCAAQMAREF SEFYTEHEEQ KPRHNIKKRR FESKGEPRSS VDDEPIRLPN PMIGFGVPNE PGLITHRSLP
301: ELARGPPFFY YENVALTPKG VWETISRHLF EIPPEFVDSK YFCVAARKRG YIHNLPINNR FQIQPPPKYT IHDAFPLSKR WWPEWDKRTK LNCILTCTGS
401: AQLTNRIRVA LEPYNEEPEP PKHVQRYVID QCKKWNLVWV GKNKAAPLEP DEMESILGFP KNHTRGGGMS RTERFKSLGN SFQVDTVAYH LSVLKPIFPH
501: GINVLSLFTG IGGGEVALHR LQIKMKLVVS VEISKVNRNI LKDFWEQTNQ TGELIEFSDI QHLTNDTIEG LMEKYGGFDL VIGGSPCNNL AGGNRVSRVG
601: LEGDQSSLFF EYCRILEVVR ARMRGS

Arabidopsis Description

DRM2DNA (cytosine-5)-methyltransferase DRM2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M548]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.