Factsheet for Zm00001d048516_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005789_P001
Zm00001d007084_P001
Zm00001d008249_P012
Zm00001d008338_P001
Zm00001d011236_P001
Zm00001d011705_P002
Zm00001d012423_P001
Zm00001d020580_P001
Zm00001d025913_P001
Zm00001d032070_P001
Zm00001d039214_P025
Zm00001d039821_P001
Zm00001d040279_P012
Zm00001d040429_P012
Zm00001d042930_P001
Zm00001d043682_P002
Zm00001d043683_P001
Zm00001d044247_P001
Zm00001d044917_P001
Zm00001d048491_P001
Zm00001d050047_P001
Zm00001d050100_P001
Zm00001d051591_P001
Zm00001d052871_P001
Zm00001d053451_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14620.1	Zm00001d044917_P001	AT1G49590.1	23524848
AT5G14620.1	Zm00001d011705_P002	AT2G19520.1	24855943
AT5G14620.1	Zm00001d043682_P002	AT2G19520.1	24855943
AT5G14620.1	Zm00001d043683_P001	AT2G19520.1	24855943
AT5G14620.1	Zm00001d050047_P001	AT2G19520.1	24855943
AT5G14620.1	Zm00001d052871_P001	AT2G19520.1	24855943
AT5G14620.1	Zm00001d053451_P001	AT2G19520.1	24855943
AT5G14620.1	Zm00001d008249_P012	AT2G27040.1	24855943
AT5G14620.1	Zm00001d039214_P025	AT2G27040.1	24855943
AT5G14620.1	Zm00001d040429_P012	AT2G27040.1	24855943
AT5G14620.1	Zm00001d008338_P001	AT3G16830.1	24855943
AT5G14620.1	Zm00001d040279_P012	AT3G16830.1	24855943
AT5G14620.1	Zm00001d005789_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d007084_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d011236_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d012423_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d020580_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d025913_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d032070_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d039821_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d042930_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d044247_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d048491_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d050100_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d051591_P001	AT3G45980.1	24855943
AT5G14620.1	Zm00001d008249_P012	AT5G21150.1	24855943
AT5G14620.1	Zm00001d039214_P025	AT5G21150.1	24855943
AT5G14620.1	Zm00001d040429_P012	AT5G21150.1	24855943

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00541	Sorghum	nucleus	89.55	88.82
Zm00001d027329_P002	Maize	nucleus	90.71	77.37
Os11t0109200-00	Rice	plastid	21.23	76.65
HORVU4Hr1G017920.1	Barley	cytosol	9.95	74.07
PGSC0003DMT400040081	Potato	mitochondrion	24.38	71.36
TraesCSU01G224900.1	Wheat	peroxisome	43.12	69.33
Os03t0110800-01	Rice	nucleus	68.49	69.18
TraesCS4B01G388300.1	Wheat	cytosol	22.39	67.84
HORVU3Hr1G098990.3	Barley	cytosol, nucleus	50.25	66.59
TraesCS5B01G239800.1	Wheat	nucleus	65.51	66.5
TraesCS3B01G503900.1	Wheat	peroxisome	49.42	66.08
TraesCS3D01G454900.1	Wheat	peroxisome	49.42	66.08
TraesCS6A01G124200.1	Wheat	peroxisome	23.38	65.89
TraesCS3A01G461200.1	Wheat	cytosol, nucleus, peroxisome	51.91	64.14
TraesCS5D01G248300.1	Wheat	nucleus	65.17	63.59
TraesCS5A01G241800.1	Wheat	nucleus	65.17	63.59
HORVU6Hr1G081790.1	Barley	nucleus	56.55	63.15
Zm00001d044187_P001	Maize	cytosol	25.37	62.45
TraesCS4B01G390500.4	Wheat	nucleus	60.86	61.06
TraesCSU01G140500.1	Wheat	nucleus	60.86	61.06
TraesCS4B01G388900.2	Wheat	nucleus	60.2	60.2
TraesCS4B01G334900.1	Wheat	nucleus	60.2	60.2
TraesCSU01G124200.1	Wheat	nucleus	60.2	60.2
TraesCS6B01G369700.1	Wheat	nucleus	60.36	60.17
HORVU0Hr1G018360.1	Barley	cytosol, peroxisome	43.28	60.14
TraesCS5A01G553300.3	Wheat	nucleus	60.53	59.84
TraesCS6A01G338800.1	Wheat	nucleus	60.03	59.83
TraesCS6D01G319500.2	Wheat	nucleus	59.54	59.34
TraesCSU01G140600.1	Wheat	nucleus	60.86	59.19
Os12t0108900-00	Rice	cytosol, nucleus	34.66	58.71
TraesCS6A01G163300.1	Wheat	cytosol, nucleus, peroxisome	55.89	58.3
TraesCS4D01G046800.1	Wheat	nucleus	57.71	57.9
HORVU3Hr1G098970.1	Barley	nucleus	48.09	57.2
TraesCS4B01G047000.1	Wheat	nucleus	57.05	57.14
TraesCS6D01G147500.2	Wheat	cytosol, nucleus, peroxisome	55.06	57.04
HORVU4Hr1G089730.3	Barley	nucleus	33.66	56.86
TraesCS6B01G186600.1	Wheat	nucleus	53.07	56.04
TraesCS3A01G461300.1	Wheat	cytosol, nucleus, peroxisome	49.42	55.91
TraesCS4A01G267400.1	Wheat	nucleus	39.3	55.37
HORVU6Hr1G032260.8	Barley	nucleus, peroxisome	54.06	55.35
TraesCS3B01G504000.1	Wheat	nucleus	48.76	55.06
TraesCS6B01G107600.1	Wheat	nucleus	56.05	54.17
VIT_14s0066g01040.t01	Wine grape	cytosol	44.78	50.75
TraesCS3A01G461500.1	Wheat	nucleus	53.4	50.16
KRG93258	Soybean	nucleus	48.09	50.0
KRH69576	Soybean	nucleus	44.11	49.53
Solyc02g062740.2.1	Tomato	nucleus	49.25	49.25
KRH56579	Soybean	nucleus	47.93	48.98
KRG93790	Soybean	cytosol	7.79	48.96
TraesCS3B01G504200.1	Wheat	nucleus	48.92	48.52
PGSC0003DMT400004867	Potato	nucleus	47.76	47.45
Bra023480.1-P	Field mustard	cytosol	34.99	47.42
CDY09872	Canola	nucleus	43.62	47.3
CDX69571	Canola	nucleus	43.62	47.3
GSMUA_Achr8P33680_001	Banana	cytosol	39.8	47.15
Solyc10g078190.1.1	Tomato	nucleus	47.1	46.63
Solyc04g005250.2.1	Tomato	nucleus	46.77	46.46
PGSC0003DMT400018502	Potato	nucleus	46.77	46.31
CDY40934	Canola	nucleus	33.0	45.96
CDX85589	Canola	nucleus	33.83	45.84
GSMUA_Achr3P23940_001	Banana	nucleus	45.61	45.76
CDX85590	Canola	cytosol	41.96	45.34
Bra008749.1-P	Field mustard	nucleus	44.78	44.93
CDX91035	Canola	cytosol	41.29	44.86
AT5G15380.1	Thale cress	cytoskeleton, cytosol, nucleus	45.94	44.39
GSMUA_Achr11P...	Banana	nucleus	33.83	44.25
TraesCS6D01G114500.1	Wheat	mitochondrion	33.83	42.77
TraesCS3A01G067600.1	Wheat	nucleus	53.4	42.42
AT5G14620.1	Thale cress	nucleus	43.45	41.85
TraesCS6B01G152200.1	Wheat	mitochondrion	33.17	41.84
CDY40933	Canola	cytosol	42.12	39.94
Bra023479.1-P	Field mustard	cytosol	21.72	39.34
Bra004388.1-P	Field mustard	cytosol	41.63	30.84
CDX95928	Canola	golgi	42.12	27.02
Zm00001d010928_P001	Maize	nucleus	29.02	26.56

Protein Annotations

KEGG:00270+2.1.1.37	Gene3D:1.10.8.10	MapMan:12.5.1.11	Gene3D:3.40.50.150	EntrezGene:541826	ProteinID:AQL10069.1
EMBL:BT061951	UniProt:C0HHZ5	InterPro:C5_MeTfrase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0006139	GO:GO:0006259	GO:GO:0006306	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259	InterPro:IPR001525	InterPro:IPR015940
InterPro:IPR030380	PFAM:PF00145	PFscan:PS50030	PFscan:PS51680	PANTHER:PTHR23068	PANTHER:PTHR23068:SF3
InterPro:SAM-dependent_MTases	InterPro:SAM_MeTfrase_DRM	SUPFAM:SSF46934	SUPFAM:SSF53335	InterPro:UBA	InterPro:UBA-like_sf
UniParc:UPI0001948768	EnsemblPlantsGene:Zm00001d048516	EnsemblPlants:Zm00001d048516_P001	EnsemblPlants:Zm00001d048516_T001	SEG:seg	:

Description

DNA methyl transferase3DNA (cytosine-5)-methyltransferase DRM2

Coordinates

chr9:-:157632076..157656040

Molecular Weight (calculated)

66825.0 Da

IEP (calculated)

4.960

GRAVY (calculated)

-0.515

Length

603 amino acids

Sequence
(BLAST)

001: MVHWVSDSDG SDNFEWDSDG NGEQTVSFNA AGAGSSALAA TNTDAPGPST RVANGNGKAG RSASLVQKYV DMGFSEEIVL KAMKDNGDNG ADSLVELLLT
101: YQELGNDLKV DNDFASSCAP KTADDSDDDD TLEIWDDEDA GGRSTRVANS VDDSDDEDFL HEMSRKDEKV DSLVKMGFPE DEAALAITRC GPDASISVLV
201: DSIYASQTAG DGYCGNLSDY EDNSYGGRST GNKKKRKRYG GQAQGSRGPL DGSCDEPMPL PHPMVGFNLP DQWSRRVDRS LPAQAIGPPY FYYENVALAP
301: KGVWTTISRF LYDIQPEFVD SKYFCAAARK RGYIHNLPLE NRSPLLPIPP KTISEAFPRT KRWWPSWDPR RQFNCLQTCV SSAKLLERIR VALTNSSDPP
401: PPRVQKYVLE ECRKWNLAWV GLNKVAPLEP DEMEFLLGFP KDHTRGISRT ERYRSLGNSF QVDTVAYHLS VLKDLFPQGM NVLSLFSGIG GAEVALHRLG
501: IQMNTVISVE KSEVNRTILK SWWDQTQTGT LIEITDVQTL SSERIEAYIR RIGGFDLVIG GSPCNNLTGS NRHHRDGLEG EHSALFHHYF RILHAVKSIM
601: ERL

Best Arabidopsis Sequence Match ( AT5G14620.1 )
(BLAST)

001: MVIWNNDDDD FLEIDNFQSS PRSSPIHAMQ CRVENLAGVA VTTSSLSSPT ETTDLVQMGF SDEVFATLFD MGFPVEMISR AIKETGPNVE TSVIIDTISK
101: YSSDCEAGSS KSKAIDHFLA MGFDEEKVVK AIQEHGEDNM EAIANALLSC PEAKKLPAAV EEEDGIDWSS SDDDTNYTDM LNSDDEKDPN SNENGSKIRS
201: LVKMGFSELE ASLAVERCGE NVDIAELTDF LCAAQMAREF SEFYTEHEEQ KPRHNIKKRR FESKGEPRSS VDDEPIRLPN PMIGFGVPNE PGLITHRSLP
301: ELARGPPFFY YENVALTPKG VWETISRHLF EIPPEFVDSK YFCVAARKRG YIHNLPINNR FQIQPPPKYT IHDAFPLSKR WWPEWDKRTK LNCILTCTGS
401: AQLTNRIRVA LEPYNEEPEP PKHVQRYVID QCKKWNLVWV GKNKAAPLEP DEMESILGFP KNHTRGGGMS RTERFKSLGN SFQVDTVAYH LSVLKPIFPH
501: GINVLSLFTG IGGGEVALHR LQIKMKLVVS VEISKVNRNI LKDFWEQTNQ TGELIEFSDI QHLTNDTIEG LMEKYGGFDL VIGGSPCNNL AGGNRVSRVG
601: LEGDQSSLFF EYCRILEVVR ARMRGS

Arabidopsis Description

DRM2DNA (cytosine-5)-methyltransferase DRM2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M548]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.