Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G224900.1 | Wheat | peroxisome | 82.04 | 98.67 |
| TraesCS3B01G503900.1 | Wheat | peroxisome | 97.78 | 97.78 |
| HORVU3Hr1G098990.3 | Barley | cytosol, nucleus | 90.69 | 89.89 |
| TraesCS3A01G461200.1 | Wheat | cytosol, nucleus, peroxisome | 95.57 | 88.32 |
| Os11t0109200-00 | Rice | plastid | 25.94 | 70.06 |
| PGSC0003DMT400040081 | Potato | mitochondrion | 29.71 | 65.05 |
| Zm00001d044187_P001 | Maize | cytosol | 33.26 | 61.22 |
| TraesCS5D01G248300.1 | Wheat | nucleus | 80.04 | 58.41 |
| TraesCS6D01G319500.2 | Wheat | nucleus | 76.94 | 57.36 |
| TraesCS6D01G147500.2 | Wheat | cytosol, nucleus, peroxisome | 67.18 | 52.06 |
| Os03t0110800-01 | Rice | nucleus | 68.29 | 51.59 |
| OQU87185 | Sorghum | cytosol | 26.83 | 51.27 |
| EER95283 | Sorghum | nucleus | 65.19 | 51.04 |
| Os12t0108900-00 | Rice | cytosol, nucleus | 39.91 | 50.56 |
| Zm00001d048516_P001 | Maize | nucleus | 66.08 | 49.42 |
| EES00541 | Sorghum | nucleus | 65.19 | 48.36 |
| TraesCS4D01G046800.1 | Wheat | nucleus | 63.41 | 47.59 |
| OQU93413 | Sorghum | nucleus | 63.86 | 47.45 |
| CDX85589 | Canola | nucleus | 45.01 | 45.62 |
| CDY40934 | Canola | nucleus | 43.68 | 45.5 |
| Bra023480.1-P | Field mustard | cytosol | 44.79 | 45.39 |
| VIT_14s0066g01040.t01 | Wine grape | cytosol | 53.44 | 45.3 |
| KRG93790 | Soybean | cytosol | 9.53 | 44.79 |
| CDY09872 | Canola | nucleus | 54.77 | 44.42 |
| CDX69571 | Canola | nucleus | 54.32 | 44.06 |
| KRG93258 | Soybean | nucleus | 56.54 | 43.97 |
| KRH56579 | Soybean | nucleus | 56.1 | 42.88 |
| Zm00001d027329_P002 | Maize | nucleus | 66.96 | 42.72 |
| KRH69576 | Soybean | nucleus | 50.78 | 42.64 |
| Solyc02g062740.2.1 | Tomato | nucleus | 55.21 | 41.29 |
| Bra008749.1-P | Field mustard | nucleus | 54.99 | 41.26 |
| CDX85590 | Canola | cytosol | 51.0 | 41.22 |
| CDX91035 | Canola | cytosol | 50.33 | 40.9 |
| GSMUA_Achr8P33680_001 | Banana | cytosol | 45.45 | 40.27 |
| TraesCS6D01G114500.1 | Wheat | mitochondrion | 42.57 | 40.25 |
| PGSC0003DMT400018502 | Potato | nucleus | 53.88 | 39.9 |
| PGSC0003DMT400004867 | Potato | nucleus | 53.66 | 39.87 |
| Solyc10g078190.1.1 | Tomato | nucleus | 53.66 | 39.74 |
| Solyc04g005250.2.1 | Tomato | nucleus | 52.99 | 39.37 |
| AT5G14620.1 | Thale cress | nucleus | 53.88 | 38.82 |
| AT5G15380.1 | Thale cress | cytoskeleton, cytosol, nucleus | 53.22 | 38.46 |
| GSMUA_Achr11P... | Banana | nucleus | 38.14 | 37.31 |
| CDY40933 | Canola | cytosol | 51.66 | 36.64 |
| GSMUA_Achr3P23940_001 | Banana | nucleus | 47.01 | 35.27 |
| Bra023479.1-P | Field mustard | cytosol | 24.83 | 33.63 |
| Bra004388.1-P | Field mustard | cytosol | 51.44 | 28.5 |
| CDX95928 | Canola | golgi | 51.88 | 24.89 |
| TraesCS5D01G062400.2 | Wheat | cytosol | 31.04 | 21.64 |
| TraesCS7D01G003200.1 | Wheat | nucleus | 29.49 | 21.38 |
Protein Annotations
| KEGG:00270+2.1.1.37 | Gene3D:1.10.8.10 | MapMan:12.5.1.11 | Gene3D:3.40.50.150 | InterPro:C5_MeTfrase | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006306 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008168 | GO:GO:0009987 | GO:GO:0016740 | InterPro:IPR001525 | InterPro:IPR015940 | InterPro:IPR030380 |
| PFAM:PF00145 | PFscan:PS50030 | PFscan:PS51680 | PANTHER:PTHR23068 | PANTHER:PTHR23068:SF3 | InterPro:SAM-dependent_MTases |
| InterPro:SAM_MeTfrase_DRM | SUPFAM:SSF53335 | EnsemblPlantsGene:TraesCS3D01G454900 | EnsemblPlants:TraesCS3D01G454900.1 | InterPro:UBA | : |
Description
No Description!
Coordinates
chr3D:+:561375931..561377445
Molecular Weight (calculated)
50675.7 Da
IEP (calculated)
8.773
GRAVY (calculated)
-0.399
Length
451 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEKDEKIKS LVDMGFSEDE ANMAITRCGV DVDLWELVDS LGAPRITEDS HSRNISDHQV TDQCFDLFGG GKKARLMEES KKKRNRYGGR AQGNQPSLDG
101: SHDEPMPLPN PMVGFNLPGY LQPSVTRILP KQDTGPPFFY YENVAQAPKG VWATISRFLY DIQPEFVDSK HLCATARKRG YIHNLPIENR SPLLPVPPKT
201: IFEAFPHYKK WWPSWDLRTQ LNCLRTNIAS AKLTERIGRA LASSDSPPAR SVQKYVMNEC RKGNLVWIGK NKVAPLEPEE MEYLLGFPKD HTRGLGITER
301: YKSLGNTFQV DTVAYHLSVL KVMFPNGVNV LSLFTGIGGG EVALHRLGIH MKAVVSVEIG KANKRIFRGW WDQTQTGTLI EIDDVKSLTD DRIVSFVSRF
401: GGFDLVIGGS PCNNLAGCNR YNRDGLEGEQ SALFYHYFRI LNAVKSAMAR M
101: SHDEPMPLPN PMVGFNLPGY LQPSVTRILP KQDTGPPFFY YENVAQAPKG VWATISRFLY DIQPEFVDSK HLCATARKRG YIHNLPIENR SPLLPVPPKT
201: IFEAFPHYKK WWPSWDLRTQ LNCLRTNIAS AKLTERIGRA LASSDSPPAR SVQKYVMNEC RKGNLVWIGK NKVAPLEPEE MEYLLGFPKD HTRGLGITER
301: YKSLGNTFQV DTVAYHLSVL KVMFPNGVNV LSLFTGIGGG EVALHRLGIH MKAVVSVEIG KANKRIFRGW WDQTQTGTLI EIDDVKSLTD DRIVSFVSRF
401: GGFDLVIGGS PCNNLAGCNR YNRDGLEGEQ SALFYHYFRI LNAVKSAMAR M
001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
Arabidopsis Description
DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.