Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09872 | Canola | nucleus | 87.77 | 87.77 |
| Bra008749.1-P | Field mustard | nucleus | 89.57 | 82.86 |
| HORVU4Hr1G017920.1 | Barley | cytosol | 10.43 | 71.6 |
| CDX91035 | Canola | cytosol | 70.5 | 70.63 |
| Os11t0109200-00 | Rice | plastid | 20.14 | 67.07 |
| CDX85590 | Canola | cytosol | 66.73 | 66.49 |
| CDX85589 | Canola | nucleus | 51.44 | 64.27 |
| TraesCS6A01G124200.1 | Wheat | peroxisome | 23.74 | 61.68 |
| AT5G14620.1 | Thale cress | nucleus | 66.73 | 59.27 |
| TraesCSU01G224900.1 | Wheat | peroxisome | 39.75 | 58.93 |
| CDY40934 | Canola | nucleus | 43.7 | 56.12 |
| HORVU3Hr1G098990.3 | Barley | cytosol, nucleus | 45.14 | 55.16 |
| TraesCS3D01G454900.1 | Wheat | peroxisome | 44.06 | 54.32 |
| Zm00001d044187_P001 | Maize | cytosol | 23.92 | 54.29 |
| TraesCS3A01G461200.1 | Wheat | cytosol, nucleus, peroxisome | 44.78 | 51.02 |
| CDY40933 | Canola | cytosol | 58.09 | 50.79 |
| HORVU3Hr1G098970.1 | Barley | nucleus | 43.53 | 47.73 |
| KRH69576 | Soybean | nucleus | 46.04 | 47.67 |
| HORVU0Hr1G018360.1 | Barley | cytosol, peroxisome | 36.87 | 47.23 |
| Os03t0110800-01 | Rice | nucleus | 50.54 | 47.07 |
| TraesCS3A01G461300.1 | Wheat | cytosol, nucleus, peroxisome | 44.78 | 46.72 |
| HORVU6Hr1G081790.1 | Barley | nucleus | 45.32 | 46.67 |
| EER95283 | Sorghum | nucleus | 45.86 | 44.27 |
| TraesCS5A01G241800.1 | Wheat | nucleus | 49.1 | 44.17 |
| TraesCS5D01G248300.1 | Wheat | nucleus | 48.74 | 43.85 |
| Zm00001d048516_P001 | Maize | nucleus | 47.3 | 43.62 |
| TraesCS4A01G267400.1 | Wheat | nucleus | 33.27 | 43.22 |
| GSMUA_Achr8P33680_001 | Banana | cytosol | 39.39 | 43.03 |
| TraesCSU01G124200.1 | Wheat | nucleus | 46.58 | 42.95 |
| TraesCS6A01G338800.1 | Wheat | nucleus | 46.58 | 42.81 |
| TraesCS4B01G012300.2 | Wheat | cytosol | 24.46 | 42.77 |
| TraesCSU01G140500.1 | Wheat | nucleus | 46.22 | 42.76 |
| OQU93413 | Sorghum | nucleus | 46.58 | 42.67 |
| TraesCS5A01G553300.3 | Wheat | nucleus | 46.76 | 42.62 |
| GSMUA_Achr11P... | Banana | nucleus | 35.07 | 42.3 |
| EES00541 | Sorghum | nucleus | 46.22 | 42.27 |
| TraesCS6D01G319500.2 | Wheat | nucleus | 45.86 | 42.15 |
| TraesCS4D01G046800.1 | Wheat | nucleus | 45.5 | 42.1 |
| HORVU4Hr1G089730.3 | Barley | nucleus | 26.8 | 41.74 |
| TraesCSU01G140600.1 | Wheat | nucleus | 46.22 | 41.45 |
| Os12t0108900-00 | Rice | cytosol, nucleus | 26.44 | 41.29 |
| OQU87185 | Sorghum | cytosol | 17.27 | 40.68 |
| TraesCS6A01G163300.1 | Wheat | cytosol, nucleus, peroxisome | 41.55 | 39.97 |
| TraesCS3A01G461500.1 | Wheat | nucleus | 46.04 | 39.88 |
| TraesCS6D01G147500.2 | Wheat | cytosol, nucleus, peroxisome | 41.37 | 39.52 |
| GSMUA_Achr3P23940_001 | Banana | nucleus | 42.63 | 39.43 |
| HORVU6Hr1G032260.8 | Barley | nucleus, peroxisome | 39.93 | 37.69 |
| Zm00001d027329_P002 | Maize | nucleus | 47.12 | 37.06 |
| CDX95928 | Canola | golgi | 58.81 | 34.79 |
| TraesCS3A01G067600.1 | Wheat | nucleus | 42.81 | 31.36 |
| TraesCS6D01G114500.1 | Wheat | mitochondrion | 26.26 | 30.61 |
| HORVU7Hr1G000490.1 | Barley | cytosol | 1.62 | 28.12 |
| CDX82030 | Canola | endoplasmic reticulum | 24.64 | 24.38 |
| CDY13817 | Canola | plastid | 23.56 | 23.99 |
| CDX95858 | Canola | cytosol | 28.6 | 22.49 |
| CDX92125 | Canola | plasma membrane, vacuole | 28.96 | 18.21 |
Protein Annotations
| KEGG:00270+2.1.1.37 | Gene3D:1.10.8.10 | MapMan:12.5.1.11 | Gene3D:3.40.50.150 | GO:A0A078BXV2 | InterPro:C5_MeTfrase |
| EnsemblPlants:CDX69571 | ProteinID:CDX69571 | ProteinID:CDX69571.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006306 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008168 | GO:GO:0009987 | GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00135582001 | InterPro:IPR001525 | InterPro:IPR015940 |
| InterPro:IPR030380 | PFAM:PF00145 | PFscan:PS50030 | PFscan:PS51680 | PANTHER:PTHR23068 | PANTHER:PTHR23068:SF3 |
| InterPro:SAM-dependent_MTases | InterPro:SAM_MeTfrase_DRM | InterPro:SANT/Myb | SUPFAM:SSF46934 | SUPFAM:SSF53335 | InterPro:UBA |
| InterPro:UBA-like_sf | UniParc:UPI0004EEFCD2 | SEG:seg | : | : | : |
Description
BnaA10g19200D
Coordinates
chrLK031790:+:861781..865560
Molecular Weight (calculated)
62189.7 Da
IEP (calculated)
4.987
GRAVY (calculated)
-0.428
Length
556 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFSPENIAR AIDEYGPNAD TVVIIDAISK YTVTCEASSS KSKTIDHFLA MGFEEEKVIK AIHEHGEDNI EEIANALISS AAEVSPKIKE EEDIEWSESD
101: DEKYANFLSS DDEKVSDSSS ENGNQLRSLM NMGFSELEAS LAIERCGTGE DVSIADLADF ICAAQIAREF DEFHADPEEQ KPNVKKRRIE PRREPRSSAA
201: DDEPLRLPNP MIGFGVPNEP GLITQRSLPA MARMPPFFYY ENVALAPKGV WDTISSHLYD VPPEFVDSKY ICAAARKRGY VHNLPISGRY QVQPPPKYTI
301: SEAFPLTKKW WPEWDKRTKL NCILTVNASA QLTNRIRLAL EPYGGEPPES KKKYVIEQCK KWNLVWVGKN KAAPLEPDEM ETLLGFPKNH TRGGGMSRTE
401: RLKSLGNSFQ VDTVAYHLSV LKPLFPYGIN VLSLFTGIGG GEVALHRLQI PMKTVVSVEI SAVNRNILKD FWEQTNQKGT LIEFADVQDL SNEKIVELMK
501: QFGGFDLVIG GSPCNNLAGG NRVSRSGLEG DQSCLFYEYC RILDVVRETT KTMRRS
101: DEKYANFLSS DDEKVSDSSS ENGNQLRSLM NMGFSELEAS LAIERCGTGE DVSIADLADF ICAAQIAREF DEFHADPEEQ KPNVKKRRIE PRREPRSSAA
201: DDEPLRLPNP MIGFGVPNEP GLITQRSLPA MARMPPFFYY ENVALAPKGV WDTISSHLYD VPPEFVDSKY ICAAARKRGY VHNLPISGRY QVQPPPKYTI
301: SEAFPLTKKW WPEWDKRTKL NCILTVNASA QLTNRIRLAL EPYGGEPPES KKKYVIEQCK KWNLVWVGKN KAAPLEPDEM ETLLGFPKNH TRGGGMSRTE
401: RLKSLGNSFQ VDTVAYHLSV LKPLFPYGIN VLSLFTGIGG GEVALHRLQI PMKTVVSVEI SAVNRNILKD FWEQTNQKGT LIEFADVQDL SNEKIVELMK
501: QFGGFDLVIG GSPCNNLAGG NRVSRSGLEG DQSCLFYEYC RILDVVRETT KTMRRS
001: MVIWNNDDDD FLEIDNFQSS PRSSPIHAMQ CRVENLAGVA VTTSSLSSPT ETTDLVQMGF SDEVFATLFD MGFPVEMISR AIKETGPNVE TSVIIDTISK
101: YSSDCEAGSS KSKAIDHFLA MGFDEEKVVK AIQEHGEDNM EAIANALLSC PEAKKLPAAV EEEDGIDWSS SDDDTNYTDM LNSDDEKDPN SNENGSKIRS
201: LVKMGFSELE ASLAVERCGE NVDIAELTDF LCAAQMAREF SEFYTEHEEQ KPRHNIKKRR FESKGEPRSS VDDEPIRLPN PMIGFGVPNE PGLITHRSLP
301: ELARGPPFFY YENVALTPKG VWETISRHLF EIPPEFVDSK YFCVAARKRG YIHNLPINNR FQIQPPPKYT IHDAFPLSKR WWPEWDKRTK LNCILTCTGS
401: AQLTNRIRVA LEPYNEEPEP PKHVQRYVID QCKKWNLVWV GKNKAAPLEP DEMESILGFP KNHTRGGGMS RTERFKSLGN SFQVDTVAYH LSVLKPIFPH
501: GINVLSLFTG IGGGEVALHR LQIKMKLVVS VEISKVNRNI LKDFWEQTNQ TGELIEFSDI QHLTNDTIEG LMEKYGGFDL VIGGSPCNNL AGGNRVSRVG
601: LEGDQSSLFF EYCRILEVVR ARMRGS
101: YSSDCEAGSS KSKAIDHFLA MGFDEEKVVK AIQEHGEDNM EAIANALLSC PEAKKLPAAV EEEDGIDWSS SDDDTNYTDM LNSDDEKDPN SNENGSKIRS
201: LVKMGFSELE ASLAVERCGE NVDIAELTDF LCAAQMAREF SEFYTEHEEQ KPRHNIKKRR FESKGEPRSS VDDEPIRLPN PMIGFGVPNE PGLITHRSLP
301: ELARGPPFFY YENVALTPKG VWETISRHLF EIPPEFVDSK YFCVAARKRG YIHNLPINNR FQIQPPPKYT IHDAFPLSKR WWPEWDKRTK LNCILTCTGS
401: AQLTNRIRVA LEPYNEEPEP PKHVQRYVID QCKKWNLVWV GKNKAAPLEP DEMESILGFP KNHTRGGGMS RTERFKSLGN SFQVDTVAYH LSVLKPIFPH
501: GINVLSLFTG IGGGEVALHR LQIKMKLVVS VEISKVNRNI LKDFWEQTNQ TGELIEFSDI QHLTNDTIEG LMEKYGGFDL VIGGSPCNNL AGGNRVSRVG
601: LEGDQSSLFF EYCRILEVVR ARMRGS
Arabidopsis Description
DRM2DNA (cytosine-5)-methyltransferase DRM2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M548]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.