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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX68112
CDX70287
CDX73212
CDX77061
CDX80214
CDX80590
CDX81933
CDX82696
CDX85931
CDX87650
CDX92100
CDX92405
CDX92406
CDX95900
CDY03358
CDY04475
CDY09103
CDY10359
CDY13521
CDY16595
CDY21661
CDY28102
CDY29763
CDY31584
CDY35867
CDY39073
CDY48192
CDY48711
CDY50502
CDY50960
CDY56413
CDY59516
CDY62055
CDY67912
CDY70287

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G14620.1 CDY28102 AT1G49590.1 23524848
AT5G14620.1 CDY50960 AT1G49590.1 23524848
AT5G14620.1 CDX68112 AT1G75950.1 24855943
AT5G14620.1 CDX73212 AT1G75950.1 24855943
AT5G14620.1 CDX80590 AT1G75950.1 24855943
AT5G14620.1 CDX85931 AT1G75950.1 24855943
AT5G14620.1 CDX87650 AT1G75950.1 24855943
AT5G14620.1 CDY13521 AT1G75950.1 24855943
AT5G14620.1 CDY39073 AT1G75950.1 24855943
AT5G14620.1 CDX81933 AT2G19520.1 24855943
AT5G14620.1 CDX82696 AT2G19520.1 24855943
AT5G14620.1 CDY03358 AT2G19520.1 24855943
AT5G14620.1 CDY21661 AT2G19520.1 24855943
AT5G14620.1 CDY29763 AT2G19520.1 24855943
AT5G14620.1 CDY35867 AT2G19520.1 24855943
AT5G14620.1 CDY48711 AT2G19520.1 24855943
AT5G14620.1 CDY70287 AT2G19520.1 24855943
AT5G14620.1 CDX77061 AT2G27040.1 24855943
AT5G14620.1 CDY04475 AT2G27040.1 24855943
AT5G14620.1 CDY48192 AT2G27040.1 24855943
AT5G14620.1 CDY56413 AT2G27040.1 24855943
AT5G14620.1 CDY62055 AT2G27040.1 24855943
AT5G14620.1 CDX92100 AT3G16830.1 24855943
AT5G14620.1 CDX95900 AT3G16830.1 24855943
AT5G14620.1 CDY50502 AT3G16830.1 24855943
AT5G14620.1 CDY67912 AT3G16830.1 24855943
AT5G14620.1 CDX80214 AT3G45980.1 24855943
AT5G14620.1 CDY31584 AT3G45980.1 24855943
AT5G14620.1 CDX70287 AT5G03740.1 24855943
AT5G14620.1 CDY10359 AT5G03740.1 24855943
AT5G14620.1 CDX92405 AT5G21150.1 24855943
AT5G14620.1 CDX92406 AT5G21150.1 24855943
AT5G14620.1 CDY09103 AT5G21150.1 24855943
AT5G14620.1 CDY16595 AT5G21150.1 24855943
AT5G14620.1 CDY59516 AT5G21150.1 24855943
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra023480.1-P Field mustard cytosol 83.6 83.6
HORVU4Hr1G017920.1 Barley cytosol 12.13 66.67
Os11t0109200-00 Rice plastid 21.8 58.08
TraesCS6A01G124200.1 Wheat peroxisome 26.07 54.21
TraesCSU01G224900.1 Wheat peroxisome 44.27 52.53
CDX69571 Canola nucleus 64.27 51.44
CDX85590 Canola cytosol 62.7 50.0
CDY09872 Canola nucleus 62.25 49.82
CDX91035 Canola cytosol 62.02 49.73
Zm00001d044187_P001 Maize cytosol 25.17 45.71
TraesCS3D01G454900.1 Wheat peroxisome 45.62 45.01
HORVU3Hr1G098990.3 Barley cytosol, nucleus 45.84 44.84
CDY40934 Canola nucleus 43.15 44.34
TraesCS3A01G461200.1 Wheat cytosol, nucleus, peroxisome 46.29 42.21
AT5G14620.1 Thale cress nucleus 57.53 40.89
HORVU3Hr1G098970.1 Barley nucleus 44.94 39.45
HORVU0Hr1G018360.1 Barley cytosol, peroxisome 37.75 38.71
HORVU6Hr1G081790.1 Barley nucleus 45.84 37.78
TraesCS3A01G461300.1 Wheat cytosol, nucleus, peroxisome 43.6 36.4
KRH69576 Soybean nucleus 43.82 36.31
CDY40933 Canola cytosol 51.69 36.16
EER95283 Sorghum nucleus 46.74 36.11
OQU87185 Sorghum cytosol 18.88 35.59
Os03t0110800-01 Rice nucleus 46.97 35.01
TraesCS6A01G338800.1 Wheat nucleus 47.42 34.88
TraesCS6D01G319500.2 Wheat nucleus 47.19 34.71
TraesCS5A01G241800.1 Wheat nucleus 48.09 34.63
TraesCSU01G124200.1 Wheat nucleus 46.52 34.33
TraesCS5D01G248300.1 Wheat nucleus 47.64 34.3
TraesCSU01G140500.1 Wheat nucleus 46.29 34.28
Zm00001d048516_P001 Maize nucleus 45.84 33.83
EES00541 Sorghum nucleus 46.07 33.72
OQU93413 Sorghum nucleus 45.84 33.61
TraesCS5A01G553300.3 Wheat nucleus 45.62 33.28
TraesCSU01G140600.1 Wheat nucleus 46.29 33.23
HORVU4Hr1G089730.3 Barley nucleus 26.52 33.05
TraesCS4A01G267400.1 Wheat nucleus 31.69 32.94
GSMUA_Achr8P33680_001 Banana cytosol 36.85 32.22
GSMUA_Achr11P... Banana nucleus 33.26 32.1
TraesCS4B01G012300.2 Wheat cytosol 22.92 32.08
TraesCS4D01G046800.1 Wheat nucleus 42.92 31.78
TraesCS3A01G461500.1 Wheat nucleus 45.62 31.62
TraesCS6A01G163300.1 Wheat cytosol, nucleus, peroxisome 40.9 31.49
TraesCS6D01G147500.2 Wheat cytosol, nucleus, peroxisome 40.45 30.93
HORVU6Hr1G032260.8 Barley nucleus, peroxisome 39.78 30.05
Os12t0108900-00 Rice cytosol, nucleus 23.6 29.49
Zm00001d027329_P002 Maize nucleus 45.84 28.85
GSMUA_Achr3P23940_001 Banana nucleus 38.88 28.79
TraesCS6D01G114500.1 Wheat mitochondrion 28.54 26.62
TraesCS3A01G067600.1 Wheat nucleus 45.39 26.61
CDX95928 Canola golgi 52.36 24.79
CDY13817 Canola plastid 22.92 18.68
CDX82030 Canola endoplasmic reticulum 22.7 17.97
CDX95858 Canola cytosol 28.54 17.96
CDX92125 Canola plasma membrane, vacuole 28.76 14.48
HORVU7Hr1G000490.1 Barley cytosol 0.67 9.38
Protein Annotations
KEGG:00270+2.1.1.37MapMan:12.5.1.11Gene3D:3.40.50.150GO:A0A078DB98InterPro:C5_MeTfraseEnsemblPlants:CDX85589
ProteinID:CDX85589ProteinID:CDX85589.1GO:GO:0003674GO:GO:0003824GO:GO:0006139GO:GO:0006259
GO:GO:0006306GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0009987GO:GO:0016740
EnsemblPlantsGene:GSBRNA2T00143311001InterPro:IPR001525InterPro:IPR030380PFAM:PF00145PFscan:PS51680PANTHER:PTHR23068
PANTHER:PTHR23068:SF3InterPro:SAM-dependent_MTasesInterPro:SAM_MeTfrase_DRMSUPFAM:SSF53335UniParc:UPI0004EE7F60SEG:seg
Description
BnaA02g02240D
Coordinates
chrLK031842:+:794200..797509
Molecular Weight (calculated)
50638.0 Da
IEP (calculated)
5.888
GRAVY (calculated)
-0.411
Length
445 amino acids
Sequence
(BLAST)
001: MEENLHRVSR SPDVGTHNQN DSVAEDNRRR RHYNHHTHGV QAKDSADWNA VDDLDFEILN FHSSPSNADD DMDFEIVNFH SSPSSPSPVV TNDEPLRLPI
101: PMSGLGVPNE QLFVTQRSLP ELARGPPYFY YENVVLAPWE TISRHLYDVA PEFVDSSFIC AAARERGYVH NLPISNRYLI QPPPKHTIQE VLPLTKNWWP
201: TWDTRTKLNC IFTVNASSQL TNRIRSALEA SRGEPPEEIK RYVIEQCEKW NLIWVGQNKA VPLEVNEIET LMGFPIYHTR GGGGISRAER LKSLSNSFQV
301: DTLAYHLSVL KPLFPDGINV LSLFTGIGGG EMALHRLQIP MKTVVSVEFS QVNKYILRDF WERTNQKGVL IEFEDVQDLT KDIIVELMKQ FGGFDIVIGG
401: SPCNNLAGGN RVTPNCLEGE QSLMFYEYCR VLNVVRQTAK EMRRS
Best Arabidopsis Sequence Match ( AT3G17310.1 )
(BLAST)
001: MADMRRRNGS GGSSNHERNE QILFPKPETL DFDLPCDTSF PQQIGDNAAS SSGSNVKSLL IEMGFCPTLV QKAIDENGQD DFELLLEILT KSTETEPPGP
101: SFHGLMEPKP EPDIEYETDR IRIALLTMKF PENLVDFALD RLGKDTPIDE MVDFIVAAQL AEKYAEESED SLDGAEINEE DEDVTPVTAR GPEVPNEQLF
201: ETMDKTLRLL EMGFSNDEIS MAIEKIGTKG QISVLAESIV TGEFPAECHD DLEDIEKKVS AAAPAVNRTC LSKSWRFVGV GAQKEDGGGG SSSGTANIKP
301: DPGIESFPFP ATDNVGETSR GKRPKDEDEN AYPEEYTGYD DRGKRLRPED MGDSSSFMET PWMQDEWKDN TYEFPSVMQP RLSQSLGPKV ARRPYFFYGQ
401: LGELSPSWWS KISGFLFGIH PEHVDTRLCS ALRRTEGYLH NLPTVNRFNT LPNPRLTIQD AMPHMRSWWP QWDIRKHFNS GTCSNMKDAT LLCERIGRRI
501: AECKGKPTQQ DQTLILRHCH TSNLIWIAPN ILSPLEPEHL ECIMGYPMNH TNIGGGRLAE RLKLFDYCFQ TDTLGYHLSV LKSMFPQGLT VLSLFSGIGG
601: AEIALDRLGI HLKGVVSVES CGLSRNILKR WWQTSGQTGE LVQIEEIKSL TAKRLETLMQ RFGGFDFVIC QNPSTPLDLS KEISNSEACE FDYTLFNEFA
701: RVTKRVRDMM
Arabidopsis Description
DRM3Probable inactive DNA (cytosine-5)-methyltransferase DRM3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1E8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.